Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is yciW [C]
Identifier: 157371391
GI number: 157371391
Start: 3470154
End: 3471272
Strand: Reverse
Name: yciW [C]
Synonym: Spro_3152
Alternate gene names: 157371391
Gene position: 3471272-3470154 (Counterclockwise)
Preceding gene: 157371392
Following gene: 157371390
Centisome position: 63.71
GC content: 61.48
Gene sequence:
>1119_bases ATGACTGCAACATTGAATAATGACGACCTGCTGGCCGTGCTGGCAGAGATCGCACCCGATTCCGCATTGGCGCAGGCCCG AGTGACGCGGCAGGCGGCGACGGATGCGATTCAGGCCAGCTATCTGGCGTTGTTCGCACCCGCCGATGCCGGCGATTTTC CGATAGCGCAGCGGCTGCAGACAGCGCAGCGCATCAGCGAATGGCATGCGGACAAACCCCTGGCGGCCCATTATGCGGCG TTGCTGCAACAGCAGGGCGGTGCAGAGGATAGTCCGCGTTTGCTGGCGGCGTTGGATCATGCCGAACGGTTGGCGTTCAA ACCCGCCAGTGCTGACGCGCAGCATTTGCAGGCATTGCAGCAGGCCGGTTGGTCACTGGATGATATTGTCACCCTGTCGC AACTGATCGCTTTTGTCAGCTTCCAAAGCCGTTTGCTGACGGGCTATCGGTTGCTGAGTGGCAAGCCGGTCGAAAGTGGC AGTGCCTCATCCGTCAGAGCCGGCAGTTGGCGTACCGAGTCCGCTACCCTGAGCGGCCGCCATGCTCCGCCAAAGTTCAC CCGTCAGGAGTTGGGTTGGGAACCGTGGATCGCCGCCAAACCGCTGGCAGAGTTTGATGCATCAGGCCAGGCGTTGTTAA CGCGTTTCGGGCATAGCGACTCGGATTATTTTCGCCTGTTGGCACGTAACCATCCGGTACTGGAACAGCGAACGCTGGCG GACCGAGCCATTTTCTATACTCCGGGCGGGTTGGAACGTAAGGATCGCGAACTGGCGGCGACGGCCGCCAGCAAGGTGAA CGGTTGTATCTATTGTGCCTCTGTACATGCACGCAAGGCGGCCCAGTTGTCCAAGAAAACGGACGAGGTGCAGCGCCTGC TGGACGTGGCTCCGGGGGACGTGTTGAGTGAGGGGCAAGGGGAGCCGTGGCGCGCACAGATCGATTTTGCCGCGGCGTTG TCCGCCACGCCGCCGCAGGCTAATGCCGATCATCTGGTAGCGCTGCGTGCGCAGGGCCTCGACGAGCTGGCGCTACTGGA CCTGGTGCAGTCGACGGCGTTCTTTGCCTGGGCTAACCGGCTGATGCTGACCCTGGGTGAACCCTTCGACGACCAATAA
Upstream 100 bases:
>100_bases GTTCTATTGAGCTGATTGCCCGTCACGTTGCCCCTGAACTGGGCTGGCAGCGTCGCACTCCTGTTTCGAACTCCTACGAA CATCACGCTGAGGAAAAGGT
Downstream 100 bases:
>100_bases GCCTGCTGCCAACCACTGCTATATAAACCGGGGCGAAAGTTTTCGCCCCTAAGCAATTTAAGATAATAATTACCTTTTCA GGCATATCTTTAACGTTATT
Product: peroxidase-like protein
Products: NA
Alternate protein names: Alkylhydroperoxidase AhpD Domain Protein; Alkylhydroperoxidase AhpD Family Core Domain; Peroxidase; Alkylhydroperoxidase; Carboxymuconolactone Decarboxylase Family; Conserved Protein; Alkylhydroperoxidase-Related; Peroxidase-Related Subfamily
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MTATLNNDDLLAVLAEIAPDSALAQARVTRQAATDAIQASYLALFAPADAGDFPIAQRLQTAQRISEWHADKPLAAHYAA LLQQQGGAEDSPRLLAALDHAERLAFKPASADAQHLQALQQAGWSLDDIVTLSQLIAFVSFQSRLLTGYRLLSGKPVESG SASSVRAGSWRTESATLSGRHAPPKFTRQELGWEPWIAAKPLAEFDASGQALLTRFGHSDSDYFRLLARNHPVLEQRTLA DRAIFYTPGGLERKDRELAATAASKVNGCIYCASVHARKAAQLSKKTDEVQRLLDVAPGDVLSEGQGEPWRAQIDFAAAL SATPPQANADHLVALRAQGLDELALLDLVQSTAFFAWANRLMLTLGEPFDDQ
Sequences:
>Translated_372_residues MTATLNNDDLLAVLAEIAPDSALAQARVTRQAATDAIQASYLALFAPADAGDFPIAQRLQTAQRISEWHADKPLAAHYAA LLQQQGGAEDSPRLLAALDHAERLAFKPASADAQHLQALQQAGWSLDDIVTLSQLIAFVSFQSRLLTGYRLLSGKPVESG SASSVRAGSWRTESATLSGRHAPPKFTRQELGWEPWIAAKPLAEFDASGQALLTRFGHSDSDYFRLLARNHPVLEQRTLA DRAIFYTPGGLERKDRELAATAASKVNGCIYCASVHARKAAQLSKKTDEVQRLLDVAPGDVLSEGQGEPWRAQIDFAAAL SATPPQANADHLVALRAQGLDELALLDLVQSTAFFAWANRLMLTLGEPFDDQ >Mature_371_residues TATLNNDDLLAVLAEIAPDSALAQARVTRQAATDAIQASYLALFAPADAGDFPIAQRLQTAQRISEWHADKPLAAHYAAL LQQQGGAEDSPRLLAALDHAERLAFKPASADAQHLQALQQAGWSLDDIVTLSQLIAFVSFQSRLLTGYRLLSGKPVESGS ASSVRAGSWRTESATLSGRHAPPKFTRQELGWEPWIAAKPLAEFDASGQALLTRFGHSDSDYFRLLARNHPVLEQRTLAD RAIFYTPGGLERKDRELAATAASKVNGCIYCASVHARKAAQLSKKTDEVQRLLDVAPGDVLSEGQGEPWRAQIDFAAALS ATPPQANADHLVALRAQGLDELALLDLVQSTAFFAWANRLMLTLGEPFDDQ
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40210; Mature: 40079
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00019 ACTININ_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATLNNDDLLAVLAEIAPDSALAQARVTRQAATDAIQASYLALFAPADAGDFPIAQRLQ CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHH TAQRISEWHADKPLAAHYAALLQQQGGAEDSPRLLAALDHAERLAFKPASADAQHLQALQ HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH QAGWSLDDIVTLSQLIAFVSFQSRLLTGYRLLSGKPVESGSASSVRAGSWRTESATLSGR HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCC HAPPKFTRQELGWEPWIAAKPLAEFDASGQALLTRFGHSDSDYFRLLARNHPVLEQRTLA CCCCCHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHH DRAIFYTPGGLERKDRELAATAASKVNGCIYCASVHARKAAQLSKKTDEVQRLLDVAPGD CCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC VLSEGQGEPWRAQIDFAAALSATPPQANADHLVALRAQGLDELALLDLVQSTAFFAWANR HHHCCCCCCCEEEEEHHHHHCCCCCCCCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHH LMLTLGEPFDDQ HHHEECCCCCCC >Mature Secondary Structure TATLNNDDLLAVLAEIAPDSALAQARVTRQAATDAIQASYLALFAPADAGDFPIAQRLQ CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHH TAQRISEWHADKPLAAHYAALLQQQGGAEDSPRLLAALDHAERLAFKPASADAQHLQALQ HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH QAGWSLDDIVTLSQLIAFVSFQSRLLTGYRLLSGKPVESGSASSVRAGSWRTESATLSGR HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCC HAPPKFTRQELGWEPWIAAKPLAEFDASGQALLTRFGHSDSDYFRLLARNHPVLEQRTLA CCCCCHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHH DRAIFYTPGGLERKDRELAATAASKVNGCIYCASVHARKAAQLSKKTDEVQRLLDVAPGD CCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC VLSEGQGEPWRAQIDFAAALSATPPQANADHLVALRAQGLDELALLDLVQSTAFFAWANR HHHCCCCCCCEEEEEHHHHHCCCCCCCCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHH LMLTLGEPFDDQ HHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA