Definition | Serratia proteamaculans 568 chromosome, complete genome. |
---|---|
Accession | NC_009832 |
Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is yhbW [C]
Identifier: 157371392
GI number: 157371392
Start: 3471269
End: 3472315
Strand: Reverse
Name: yhbW [C]
Synonym: Spro_3153
Alternate gene names: 157371392
Gene position: 3472315-3471269 (Counterclockwise)
Preceding gene: 157371393
Following gene: 157371391
Centisome position: 63.73
GC content: 61.89
Gene sequence:
>1047_bases ATGAGCAGTAAAAAACTGGGGTTTTTCACCCGCCTGTTGGATCAGGGCAGCGCGCAACAGCGCTACCGGTTGGCAACAGA GCAAATCCTGCATGCCGAACGGGCCGGGTTTGATAGCGCCTGGGTGGCGCAGCACCATTTTCATGAAGATGAAGGCGGTT TGCCCTCACCATTGGTGTTCCTGGCGCAGGTGGCGGCACGAACTCGTCATATCCGGCTGGGCACCGGGGTGATCACGCTG CCGATGGAGTCGGCCATTCGGGTGGCGGAGGATACCGCGGTGCTGGATCTGCTATCCGACGGCAGGCTGGAGGTAGGGAT TGCCGCCGGGGGGACACCGTCTGCGTTTGGCGCCTTCGGTTTGGATGCCCAACAGCGCCACGCGGTGTTTGCCGACAACT TCAGTACCTTGCTGCGCGCCTGGCGCGGTGAGGCATTGGGTGGCGAAGATAACCGGTTGTACCCGGCAGCGCCACAGTTG GCAGAGCGGGTGTGGCAGGCGACCTTTTCTGTCGAGGGGGGCGAACGCGCGGGGCGGGCCGGTGATGGTTTAATGCTGTC GCGCACGCAACCGCGCCCGGCGGATGCGCCAGATCTGCCGCTGGACGAATTGCAGAATCCGATTATTGATGCCTATCTGG CGGCGCTGCCGCCTGGCATCGCGCCGCGCATTATGGGCTCACGTACTGCATTAGTGACCGATAATAGCCAACAGGCGCGG GATTTTGCCGCACAGGGGCTGGGCCGGGGGCTTGAACGTCTGCGTGCCAGCGGCCACCGACCGGCTGACGAATCGCTCGA TGGGCTGATCCGCGCCTTTGACGTGCATCTTGGCACTCCGGATCAGGTGATTACTTCGTTGCAGAAAGACAGCGCGTTGG CGCGCGTGACCGACTTGGCCTTCCAGGTGCATTCCATCGATCCGCCGCATGCCCACATTCTGCGTTCTATTGAGCTGATT GCCCGTCACGTTGCCCCTGAACTGGGCTGGCAGCGTCGCACTCCTGTTTCGAACTCCTACGAACATCACGCTGAGGAAAA GGTATGA
Upstream 100 bases:
>100_bases CTGTTCGCCATGCCGGGCAGCGATTACACCCGTCAGTTGATTGAGGCCATTCCCGGCCGTCAGTTTTATGCCGAACAGCC CAAGAGTGAGGACGTATTCT
Downstream 100 bases:
>100_bases CTGCAACATTGAATAATGACGACCTGCTGGCCGTGCTGGCAGAGATCGCACCCGATTCCGCATTGGCGCAGGCCCGAGTG ACGCGGCAGGCGGCGACGGA
Product: luciferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MSSKKLGFFTRLLDQGSAQQRYRLATEQILHAERAGFDSAWVAQHHFHEDEGGLPSPLVFLAQVAARTRHIRLGTGVITL PMESAIRVAEDTAVLDLLSDGRLEVGIAAGGTPSAFGAFGLDAQQRHAVFADNFSTLLRAWRGEALGGEDNRLYPAAPQL AERVWQATFSVEGGERAGRAGDGLMLSRTQPRPADAPDLPLDELQNPIIDAYLAALPPGIAPRIMGSRTALVTDNSQQAR DFAAQGLGRGLERLRASGHRPADESLDGLIRAFDVHLGTPDQVITSLQKDSALARVTDLAFQVHSIDPPHAHILRSIELI ARHVAPELGWQRRTPVSNSYEHHAEEKV
Sequences:
>Translated_348_residues MSSKKLGFFTRLLDQGSAQQRYRLATEQILHAERAGFDSAWVAQHHFHEDEGGLPSPLVFLAQVAARTRHIRLGTGVITL PMESAIRVAEDTAVLDLLSDGRLEVGIAAGGTPSAFGAFGLDAQQRHAVFADNFSTLLRAWRGEALGGEDNRLYPAAPQL AERVWQATFSVEGGERAGRAGDGLMLSRTQPRPADAPDLPLDELQNPIIDAYLAALPPGIAPRIMGSRTALVTDNSQQAR DFAAQGLGRGLERLRASGHRPADESLDGLIRAFDVHLGTPDQVITSLQKDSALARVTDLAFQVHSIDPPHAHILRSIELI ARHVAPELGWQRRTPVSNSYEHHAEEKV >Mature_347_residues SSKKLGFFTRLLDQGSAQQRYRLATEQILHAERAGFDSAWVAQHHFHEDEGGLPSPLVFLAQVAARTRHIRLGTGVITLP MESAIRVAEDTAVLDLLSDGRLEVGIAAGGTPSAFGAFGLDAQQRHAVFADNFSTLLRAWRGEALGGEDNRLYPAAPQLA ERVWQATFSVEGGERAGRAGDGLMLSRTQPRPADAPDLPLDELQNPIIDAYLAALPPGIAPRIMGSRTALVTDNSQQARD FAAQGLGRGLERLRASGHRPADESLDGLIRAFDVHLGTPDQVITSLQKDSALARVTDLAFQVHSIDPPHAHILRSIELIA RHVAPELGWQRRTPVSNSYEHHAEEKV
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 37812; Mature: 37681
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKKLGFFTRLLDQGSAQQRYRLATEQILHAERAGFDSAWVAQHHFHEDEGGLPSPLVF CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHH LAQVAARTRHIRLGTGVITLPMESAIRVAEDTAVLDLLSDGRLEVGIAAGGTPSAFGAFG HHHHHHHHCEEEECCCEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHCCC LDAQQRHAVFADNFSTLLRAWRGEALGGEDNRLYPAAPQLAERVWQATFSVEGGERAGRA CCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC GDGLMLSRTQPRPADAPDLPLDELQNPIIDAYLAALPPGIAPRIMGSRTALVTDNSQQAR CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEECCHHHHH DFAAQGLGRGLERLRASGHRPADESLDGLIRAFDVHLGTPDQVITSLQKDSALARVTDLA HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FQVHSIDPPHAHILRSIELIARHVAPELGWQRRTPVSNSYEHHAEEKV HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure SSKKLGFFTRLLDQGSAQQRYRLATEQILHAERAGFDSAWVAQHHFHEDEGGLPSPLVF CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHH LAQVAARTRHIRLGTGVITLPMESAIRVAEDTAVLDLLSDGRLEVGIAAGGTPSAFGAFG HHHHHHHHCEEEECCCEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHCCC LDAQQRHAVFADNFSTLLRAWRGEALGGEDNRLYPAAPQLAERVWQATFSVEGGERAGRA CCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC GDGLMLSRTQPRPADAPDLPLDELQNPIIDAYLAALPPGIAPRIMGSRTALVTDNSQQAR CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEECCHHHHH DFAAQGLGRGLERLRASGHRPADESLDGLIRAFDVHLGTPDQVITSLQKDSALARVTDLA HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FQVHSIDPPHAHILRSIELIARHVAPELGWQRRTPVSNSYEHHAEEKV HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424; 8796346 [H]