Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is 157371390
Identifier: 157371390
GI number: 157371390
Start: 3468983
End: 3469891
Strand: Reverse
Name: 157371390
Synonym: Spro_3151
Alternate gene names: NA
Gene position: 3469891-3468983 (Counterclockwise)
Preceding gene: 157371391
Following gene: 157371389
Centisome position: 63.68
GC content: 44.11
Gene sequence:
>909_bases ATGGGAAGTTTTTTTAAGCAGATATATCGTTATTCTCATTCTCGCCCTTACAGGCATAATGAAAATCTCTGGCCCTATGT AAAAATAGAACGTGCAGCCAGTGGAGAGATTGCCGTATTCCATTATAAAAAACAGCTTATTCCTACAGTGACGTTGTCAG CGCTGAAAGACAGTTGCCAGGGGCCGATACTGTTGACGGCGACTGGGCCATCGGTGAACACCATTTGCTTTGGCGATATT CCTGAAATGCCGGCTCTCGGGGTCAATGGTGCTTATTACTTAAGCTCGAAGGTGAGTTTTCGCTTTTATGTTATTGTCGA TATGGGATTTATCGATCAACGACCGGATATTATAAAAGAGATCATTCTGGCAACGGGTTTAATCCTGTTCACTACGGTCC ACGGCGTGGCGAAAATAATTGACAGGTTCTCGCTGGCTGGCGTGAAGTGCCAGTTCGCCGTAATCGAAGATGCGACCTTC AAAATCTATCGCCCAAAAATAAGTCCGTCGGCACTCTGGGATCATTACCGCCACGACTGTGATATCCATTTTTCCTCTGT CTGTAAATCCATCGCCTTTAGCCATGATATTCGACGTGGCATCTTCGATGCGGGGACGGTGGTTTATTGGGCCTTGCAGA TCATTTCCTTCCTGGGGTTTAAACAACTTTTTATTGCCGGGCTGGATATGAACAATTTCCATTTGCCGCGCTTTTATGAA ACGCCAGAAAATAAATTGCCGACACTTTTGCCTGAGAAAGTGGATGACCTGATCATTCCGGCTTTTAGCCATGCGAGTGA AAGAATGAAAATCAACAATATCGCTATAAAGAATTTTTCATTGGCGAGCGCCATAGACACCCGTATTTTTGAAAAGGTTG ATTGCAGTGATTTTTTCAAAGAAAACTGA
Upstream 100 bases:
>100_bases CCGTCATGAATGCTCCGATACTGATTCCATCAATGAATTTAATTTATATCAGATAAATTTTTGTTGGCGTGGATGCATTT TTTGATGGGAAATTGGCTCG
Downstream 100 bases:
>100_bases TGCCACCAACCTGATCGCTGTTTACGCTTTTTTTGCCTTTTCATTTTTTAGCGCCATTTATTGCGGCCACACCCGGGTGA ATAATTTATTCCATATCTCG
Product: putative lipopolysaccharide glycosyltransferase
Products: NA
Alternate protein names: Lipopolysaccharide Core Biosynthesis Protein RfaZ; LOW QUALITY PROTEIN Protein
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MGSFFKQIYRYSHSRPYRHNENLWPYVKIERAASGEIAVFHYKKQLIPTVTLSALKDSCQGPILLTATGPSVNTICFGDI PEMPALGVNGAYYLSSKVSFRFYVIVDMGFIDQRPDIIKEIILATGLILFTTVHGVAKIIDRFSLAGVKCQFAVIEDATF KIYRPKISPSALWDHYRHDCDIHFSSVCKSIAFSHDIRRGIFDAGTVVYWALQIISFLGFKQLFIAGLDMNNFHLPRFYE TPENKLPTLLPEKVDDLIIPAFSHASERMKINNIAIKNFSLASAIDTRIFEKVDCSDFFKEN
Sequences:
>Translated_302_residues MGSFFKQIYRYSHSRPYRHNENLWPYVKIERAASGEIAVFHYKKQLIPTVTLSALKDSCQGPILLTATGPSVNTICFGDI PEMPALGVNGAYYLSSKVSFRFYVIVDMGFIDQRPDIIKEIILATGLILFTTVHGVAKIIDRFSLAGVKCQFAVIEDATF KIYRPKISPSALWDHYRHDCDIHFSSVCKSIAFSHDIRRGIFDAGTVVYWALQIISFLGFKQLFIAGLDMNNFHLPRFYE TPENKLPTLLPEKVDDLIIPAFSHASERMKINNIAIKNFSLASAIDTRIFEKVDCSDFFKEN >Mature_301_residues GSFFKQIYRYSHSRPYRHNENLWPYVKIERAASGEIAVFHYKKQLIPTVTLSALKDSCQGPILLTATGPSVNTICFGDIP EMPALGVNGAYYLSSKVSFRFYVIVDMGFIDQRPDIIKEIILATGLILFTTVHGVAKIIDRFSLAGVKCQFAVIEDATFK IYRPKISPSALWDHYRHDCDIHFSSVCKSIAFSHDIRRGIFDAGTVVYWALQIISFLGFKQLFIAGLDMNNFHLPRFYET PENKLPTLLPEKVDDLIIPAFSHASERMKINNIAIKNFSLASAIDTRIFEKVDCSDFFKEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34324; Mature: 34193
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSFFKQIYRYSHSRPYRHNENLWPYVKIERAASGEIAVFHYKKQLIPTVTLSALKDSCQ CCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHCCC GPILLTATGPSVNTICFGDIPEMPALGVNGAYYLSSKVSFRFYVIVDMGFIDQRPDIIKE CCEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEECCCEEEEEEEEEECCCCCCHHHHHH IILATGLILFTTVHGVAKIIDRFSLAGVKCQFAVIEDATFKIYRPKISPSALWDHYRHDC HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEEEEECCCCHHHHHHHHCCCC DIHFSSVCKSIAFSHDIRRGIFDAGTVVYWALQIISFLGFKQLFIAGLDMNNFHLPRFYE CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCC TPENKLPTLLPEKVDDLIIPAFSHASERMKINNIAIKNFSLASAIDTRIFEKVDCSDFFK CCCCCCCCCCHHHHHHHEECCHHCCHHCEEEEEEEEECCHHHHHHHHHHHHHCCHHHHHC EN CC >Mature Secondary Structure GSFFKQIYRYSHSRPYRHNENLWPYVKIERAASGEIAVFHYKKQLIPTVTLSALKDSCQ CHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHCCC GPILLTATGPSVNTICFGDIPEMPALGVNGAYYLSSKVSFRFYVIVDMGFIDQRPDIIKE CCEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEECCCEEEEEEEEEECCCCCCHHHHHH IILATGLILFTTVHGVAKIIDRFSLAGVKCQFAVIEDATFKIYRPKISPSALWDHYRHDC HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEEEEECCCCHHHHHHHHCCCC DIHFSSVCKSIAFSHDIRRGIFDAGTVVYWALQIISFLGFKQLFIAGLDMNNFHLPRFYE CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCC TPENKLPTLLPEKVDDLIIPAFSHASERMKINNIAIKNFSLASAIDTRIFEKVDCSDFFK CCCCCCCCCCHHHHHHHEECCHHCCHHCEEEEEEEEECCHHHHHHHHHHHHHCCHHHHHC EN CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA