| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370983
Identifier: 157370983
GI number: 157370983
Start: 3022425
End: 3022985
Strand: Direct
Name: 157370983
Synonym: Spro_2743
Alternate gene names: NA
Gene position: 3022425-3022985 (Clockwise)
Preceding gene: 157370982
Following gene: 157370984
Centisome position: 55.47
GC content: 53.48
Gene sequence:
>561_bases ATGCACCATCTGATGTTAGATATTGAAACGCTGGATATAAAACCCAGTGCGGTGATCCTGGTGGTCGCCGCGGTATTTTT CGATCCTCAAACCGGGCAGCTCGGTGCGGAATTTGAAAACGCCGTCAGCAGCCAAAAAGATCAGCCCGGCAGAACTATCA GCCTGGATACCGTCGCCTGGTGGGCGAAACAGTCTGACGAAGCGCGCAAACTGGCTTTCGGCGGCACAGAAAGCCTTAAA CGCACATTGACCAACCTGAGCCGGTTTATCCATATGAACAGCACCGATAAGGTCAAGGTCTGGGGTAACGGCAAGGAGTT CGATTGCGCCATCCTCGAACATGCCTTCCAGCAGCTTGATATGCCCTGTCCATGGAAGTTTTGGGATACGCAAGATGTGC GCACGGTGATCACCCTGGCAGAAATGCTGGGCTTTAATCCGAAGAAAGAGCGGGCATTTGAAGGTACGCCCCATCGGGCA TTGGACGACGCCAAACATCAGGCGCGTTACGTGGCGGATACGGTATCGGCACTTTACTATCGCAAAGCCGCTGGGTCATA A
Upstream 100 bases:
>100_bases TAACGTTGGCCAATACCGCCGGCAACCGTCGGGGCTGACGGCGCATCCTGGCCCGGTTTGTAGTAATATTATGCGGTACC TCAACCGGCCGGGAGACCCA
Downstream 100 bases:
>100_bases ATAGAACCGGACTGGCGTACCGGCGGCGGGCCTATGTTTTGCCTCTTTCCATTTAGCGCCAGAATCTCTACTCTAGCCCT CTTTGTCACTCGGATGTGCT
Product: endodeoxyribonuclease
Products: NA
Alternate protein names: Exodeoxyribonuclease VIII; Exonuclease Family Protein; Exonuclease; Exodeoxyribonuclease VIII Bacteriophage Origin; Exonuclease Phage Origin; Exonuclease RNAse T And DNA Polymerase III; Ribonuclease Prophage; ATP-Dependent; Phage Exodeoxyribonuclease; ExoO Exonuclease VIII; Prophage Exonuclease; Exodeoxyribonuclease
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MHHLMLDIETLDIKPSAVILVVAAVFFDPQTGQLGAEFENAVSSQKDQPGRTISLDTVAWWAKQSDEARKLAFGGTESLK RTLTNLSRFIHMNSTDKVKVWGNGKEFDCAILEHAFQQLDMPCPWKFWDTQDVRTVITLAEMLGFNPKKERAFEGTPHRA LDDAKHQARYVADTVSALYYRKAAGS
Sequences:
>Translated_186_residues MHHLMLDIETLDIKPSAVILVVAAVFFDPQTGQLGAEFENAVSSQKDQPGRTISLDTVAWWAKQSDEARKLAFGGTESLK RTLTNLSRFIHMNSTDKVKVWGNGKEFDCAILEHAFQQLDMPCPWKFWDTQDVRTVITLAEMLGFNPKKERAFEGTPHRA LDDAKHQARYVADTVSALYYRKAAGS >Mature_186_residues MHHLMLDIETLDIKPSAVILVVAAVFFDPQTGQLGAEFENAVSSQKDQPGRTISLDTVAWWAKQSDEARKLAFGGTESLK RTLTNLSRFIHMNSTDKVKVWGNGKEFDCAILEHAFQQLDMPCPWKFWDTQDVRTVITLAEMLGFNPKKERAFEGTPHRA LDDAKHQARYVADTVSALYYRKAAGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20943; Mature: 20943
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHLMLDIETLDIKPSAVILVVAAVFFDPQTGQLGAEFENAVSSQKDQPGRTISLDTVAW CCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEEHHHHH WAKQSDEARKLAFGGTESLKRTLTNLSRFIHMNSTDKVKVWGNGKEFDCAILEHAFQQLD HHCCCCCHHHHHCCCHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCHHHHHHHHHHHCC MPCPWKFWDTQDVRTVITLAEMLGFNPKKERAFEGTPHRALDDAKHQARYVADTVSALYY CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RKAAGS HHCCCC >Mature Secondary Structure MHHLMLDIETLDIKPSAVILVVAAVFFDPQTGQLGAEFENAVSSQKDQPGRTISLDTVAW CCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEEHHHHH WAKQSDEARKLAFGGTESLKRTLTNLSRFIHMNSTDKVKVWGNGKEFDCAILEHAFQQLD HHCCCCCHHHHHCCCHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCHHHHHHHHHHHCC MPCPWKFWDTQDVRTVITLAEMLGFNPKKERAFEGTPHRALDDAKHQARYVADTVSALYY CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RKAAGS HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA