Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is fur [H]
Identifier: 157369479
GI number: 157369479
Start: 1361468
End: 1361914
Strand: Reverse
Name: fur [H]
Synonym: Spro_1236
Alternate gene names: 157369479
Gene position: 1361914-1361468 (Counterclockwise)
Preceding gene: 157369480
Following gene: 157369470
Centisome position: 24.99
GC content: 49.89
Gene sequence:
>447_bases ATGACTGACAACAACACCGCATTGAAGAAGGCCGGCTTAAAAGTCACGCTTCCGCGACTCAAAATCCTGGAAGTACTGCA AAATCCGGAATGCCATCACGTCAGTGCGGAAGATCTGTACAAAAAACTGATAGATATGGGCGAAGAAATTGGCCTGGCTA CGGTTTACCGCGTACTGAACCAATTTGATGATGCCGGCATTGTGACCCGTCACAATTTCGAAGGCGGCAAGTCCGTATTC GAACTGACCCAGCAGCATCACCACGATCACCTGATTTGCCTGGACTGCGGCAAAGTGATCGAATTCAGCGATGAATCTAT CGAAGTTCGTCAGCGTGATATCGCCAAGCAGCACGGCATCAAGCTCAGCAACCACAGCCTGTACCTGTATGGCCACTGTG AAGCCGGTGACTGCCGCGAAGACGAAACTCTGCACGATAAAAAATAA
Upstream 100 bases:
>100_bases AACCGGTTCTATAATGAGACGCAATTAACTCTTTGTGCCGACCGATGCCACAGGCGAGAACGCCTCAACTTGATTAGCAT AGTAACAGGACTGAATCCGC
Downstream 100 bases:
>100_bases TGCCCTCAACCGGCATTGAGAACCGCCTTCATGGCGGTTTTTTTATGCCCATAGCCCGGTAACGAACAGATAAAAAAATC CCCGGACAGGTCCGGGGAAA
Product: ferric uptake regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTDNNTALKKAGLKVTLPRLKILEVLQNPECHHVSAEDLYKKLIDMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVF ELTQQHHHDHLICLDCGKVIEFSDESIEVRQRDIAKQHGIKLSNHSLYLYGHCEAGDCREDETLHDKK
Sequences:
>Translated_148_residues MTDNNTALKKAGLKVTLPRLKILEVLQNPECHHVSAEDLYKKLIDMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVF ELTQQHHHDHLICLDCGKVIEFSDESIEVRQRDIAKQHGIKLSNHSLYLYGHCEAGDCREDETLHDKK >Mature_147_residues TDNNTALKKAGLKVTLPRLKILEVLQNPECHHVSAEDLYKKLIDMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFE LTQQHHHDHLICLDCGKVIEFSDESIEVRQRDIAKQHGIKLSNHSLYLYGHCEAGDCREDETLHDKK
Specific function: Fur acts as a repressor, employing Fe(2+) as a cofactor to bind the operator of the iron transport operon [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=148, Percent_Identity=88.5135135135135, Blast_Score=273, Evalue=5e-75,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16861; Mature: 16730
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDNNTALKKAGLKVTLPRLKILEVLQNPECHHVSAEDLYKKLIDMGEEIGLATVYRVLN CCCCCCHHHHCCCEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHCCHHHHHHHHH QFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFSDESIEVRQRDIAKQHGI HCCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHCC KLSNHSLYLYGHCEAGDCREDETLHDKK EECCCEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure TDNNTALKKAGLKVTLPRLKILEVLQNPECHHVSAEDLYKKLIDMGEEIGLATVYRVLN CCCCCHHHHCCCEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHCCHHHHHHHHH QFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFSDESIEVRQRDIAKQHGI HCCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHCC KLSNHSLYLYGHCEAGDCREDETLHDKK EECCCEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1406286; 11586360; 12142430 [H]