Definition | Serratia proteamaculans 568 chromosome, complete genome. |
---|---|
Accession | NC_009832 |
Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is yajO [H]
Identifier: 157369320
GI number: 157369320
Start: 1184649
End: 1185623
Strand: Reverse
Name: yajO [H]
Synonym: Spro_1077
Alternate gene names: 157369320
Gene position: 1185623-1184649 (Counterclockwise)
Preceding gene: 157369321
Following gene: 157369313
Centisome position: 21.76
GC content: 58.26
Gene sequence:
>975_bases ATGAAGTATCTGAAACTGGGTAACACCGACCTGAACGTCTCACGTATCTGTCTGGGCTGCATGACCTACGGCGAACCCAG CCGTGGCAACCATGCCTGGACGTTACCGGAGGAAAGCAGCCGACCGCTGCTGAAACAGGCGCTGGATGCCGGCATCAACT TCTTTGACACCGCCAACAGCTACTCAGACGGCAGCAGTGAGGAGATCGTCGGCCAGGCACTGCGCGATTATGCCCGCCGT GACCAGGTAGTGATCGCCACCAAAGTCTATTTCCCCCTGAGTAATCTGCAGCAGGGACTGTCGCGCGCCAAAATCATGCA ATCTATCGACGACAGCCTCAAGCGGCTGGGCACCGACTACGTTGATCTGTTGCAGATCCATCGCTGGGATTATGAAACGC CGCTGGAAGAAACGCTCGAAGCGCTGCACGATGTGGTGAAAGCCGGTAAGGCACGCTACATCGGCGCATCGTCAATGTAC GCCTGGCAGTTCGCCAAGGCGCTGTACACCGCCGATCTGCACGGCTGGACGCGCTTTGTCAGCATGCAAAACCAGTACAA CCTGATCCAGCGTGAAGAAGAGCGTGAGATGTTACCGCTGTGCGCTGCCGAAGGCATTGCCGTGCTGCCCTGGAGCCCGT TGGCGCGGGGTCGCTTAACCCGTCCCTGGGGGGAAACCACTGCGCGTCTGGTCTCCGATCAGGTCGGTAAAAATCTGTAC GATGAAACCGAAGGCATCGACGCCATCATTGCCGAGCGTGTGGCCAGTATTGCCGAAGAACGCGGTGTGCCCCGAGCGCA AATCGCACTGGCGTGGCTGTTGAGCAAGCCTGTCGTTAGCGCGCCGATTATCGGTGCGTCACGCCATGACCATCTGGAAG ACGCCGTCGCCGCCGTCGATCTTGAGTTAACACCGGAAGAGATTGCCGAGCTGGAAACGGCTTATGTGCCGCACCACGTG ACAGGATTTGAATAA
Upstream 100 bases:
>100_bases GCCCGCTCGATCGACGCCTCCGCTTTGCGGGGGCGTTTTTATTTCTGTCATCCGAAAATCCGCTACAGTTAAAGTTCTGT GCTGACACCGGGAGGCAAGC
Downstream 100 bases:
>100_bases CCTGGAGGGTTCAGGGGCGCAGCATTGAACTGCGCCCTCAAAATCAGAACAACCCAAGCGGCCAATGGTGACCAATCAGG TAGATGATACCGGCGGAAAG
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKYLKLGNTDLNVSRICLGCMTYGEPSRGNHAWTLPEESSRPLLKQALDAGINFFDTANSYSDGSSEEIVGQALRDYARR DQVVIATKVYFPLSNLQQGLSRAKIMQSIDDSLKRLGTDYVDLLQIHRWDYETPLEETLEALHDVVKAGKARYIGASSMY AWQFAKALYTADLHGWTRFVSMQNQYNLIQREEEREMLPLCAAEGIAVLPWSPLARGRLTRPWGETTARLVSDQVGKNLY DETEGIDAIIAERVASIAEERGVPRAQIALAWLLSKPVVSAPIIGASRHDHLEDAVAAVDLELTPEEIAELETAYVPHHV TGFE
Sequences:
>Translated_324_residues MKYLKLGNTDLNVSRICLGCMTYGEPSRGNHAWTLPEESSRPLLKQALDAGINFFDTANSYSDGSSEEIVGQALRDYARR DQVVIATKVYFPLSNLQQGLSRAKIMQSIDDSLKRLGTDYVDLLQIHRWDYETPLEETLEALHDVVKAGKARYIGASSMY AWQFAKALYTADLHGWTRFVSMQNQYNLIQREEEREMLPLCAAEGIAVLPWSPLARGRLTRPWGETTARLVSDQVGKNLY DETEGIDAIIAERVASIAEERGVPRAQIALAWLLSKPVVSAPIIGASRHDHLEDAVAAVDLELTPEEIAELETAYVPHHV TGFE >Mature_324_residues MKYLKLGNTDLNVSRICLGCMTYGEPSRGNHAWTLPEESSRPLLKQALDAGINFFDTANSYSDGSSEEIVGQALRDYARR DQVVIATKVYFPLSNLQQGLSRAKIMQSIDDSLKRLGTDYVDLLQIHRWDYETPLEETLEALHDVVKAGKARYIGASSMY AWQFAKALYTADLHGWTRFVSMQNQYNLIQREEEREMLPLCAAEGIAVLPWSPLARGRLTRPWGETTARLVSDQVGKNLY DETEGIDAIIAERVASIAEERGVPRAQIALAWLLSKPVVSAPIIGASRHDHLEDAVAAVDLELTPEEIAELETAYVPHHV TGFE
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=326, Percent_Identity=31.2883435582822, Blast_Score=136, Evalue=3e-32, Organism=Homo sapiens, GI4504825, Length=324, Percent_Identity=31.1728395061728, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI27436964, Length=325, Percent_Identity=31.3846153846154, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI27436962, Length=325, Percent_Identity=31.0769230769231, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI27436966, Length=325, Percent_Identity=30.7692307692308, Blast_Score=128, Evalue=8e-30, Organism=Homo sapiens, GI27436971, Length=324, Percent_Identity=30.2469135802469, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI223718702, Length=280, Percent_Identity=28.5714285714286, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI41152114, Length=284, Percent_Identity=29.9295774647887, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI41327764, Length=271, Percent_Identity=28.7822878228782, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI223718708, Length=176, Percent_Identity=33.5227272727273, Blast_Score=76, Evalue=5e-14, Organism=Escherichia coli, GI87081735, Length=324, Percent_Identity=72.5308641975309, Blast_Score=498, Evalue=1e-142, Organism=Escherichia coli, GI1789199, Length=347, Percent_Identity=31.700288184438, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1789375, Length=330, Percent_Identity=32.7272727272727, Blast_Score=138, Evalue=5e-34, Organism=Escherichia coli, GI1788070, Length=325, Percent_Identity=32, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1788081, Length=296, Percent_Identity=30.4054054054054, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1787674, Length=322, Percent_Identity=25.776397515528, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI48994888, Length=286, Percent_Identity=26.5734265734266, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786400, Length=286, Percent_Identity=26.5734265734266, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87082198, Length=287, Percent_Identity=24.390243902439, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI212645785, Length=163, Percent_Identity=36.8098159509202, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17537079, Length=321, Percent_Identity=23.6760124610592, Blast_Score=71, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6325169, Length=341, Percent_Identity=42.5219941348974, Blast_Score=266, Evalue=4e-72, Organism=Saccharomyces cerevisiae, GI6323998, Length=331, Percent_Identity=33.2326283987915, Blast_Score=163, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6319958, Length=310, Percent_Identity=32.5806451612903, Blast_Score=159, Evalue=5e-40, Organism=Saccharomyces cerevisiae, GI6319951, Length=325, Percent_Identity=31.3846153846154, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6322615, Length=256, Percent_Identity=32.8125, Blast_Score=136, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6321052, Length=155, Percent_Identity=32.258064516129, Blast_Score=84, Evalue=3e-17, Organism=Drosophila melanogaster, GI24646155, Length=318, Percent_Identity=31.4465408805031, Blast_Score=104, Evalue=7e-23, Organism=Drosophila melanogaster, GI24640980, Length=338, Percent_Identity=26.3313609467456, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI45549126, Length=338, Percent_Identity=26.0355029585799, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24646159, Length=164, Percent_Identity=38.4146341463415, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI20129731, Length=319, Percent_Identity=24.4514106583072, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 36204; Mature: 36204
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLKLGNTDLNVSRICLGCMTYGEPSRGNHAWTLPEESSRPLLKQALDAGINFFDTANS CCEEECCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCCCCCCCC YSDGSSEEIVGQALRDYARRDQVVIATKVYFPLSNLQQGLSRAKIMQSIDDSLKRLGTDY CCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH VDLLQIHRWDYETPLEETLEALHDVVKAGKARYIGASSMYAWQFAKALYTADLHGWTRFV HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHH SMQNQYNLIQREEEREMLPLCAAEGIAVLPWSPLARGRLTRPWGETTARLVSDQVGKNLY HHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHCCCCCCCHHHHHHHHHHHHHCCHHH DETEGIDAIIAERVASIAEERGVPRAQIALAWLLSKPVVSAPIIGASRHDHLEDAVAAVD HHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHC LELTPEEIAELETAYVPHHVTGFE CCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKYLKLGNTDLNVSRICLGCMTYGEPSRGNHAWTLPEESSRPLLKQALDAGINFFDTANS CCEEECCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCCCCCCCC YSDGSSEEIVGQALRDYARRDQVVIATKVYFPLSNLQQGLSRAKIMQSIDDSLKRLGTDY CCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH VDLLQIHRWDYETPLEETLEALHDVVKAGKARYIGASSMYAWQFAKALYTADLHGWTRFV HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHH SMQNQYNLIQREEEREMLPLCAAEGIAVLPWSPLARGRLTRPWGETTARLVSDQVGKNLY HHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHCCCCCCCHHHHHHHHHHHHHCCHHH DETEGIDAIIAERVASIAEERGVPRAQIALAWLLSKPVVSAPIIGASRHDHLEDAVAAVD HHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHC LELTPEEIAELETAYVPHHVTGFE CCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]