Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is yajI [H]
Identifier: 157369313
GI number: 157369313
Start: 1179735
End: 1180289
Strand: Reverse
Name: yajI [H]
Synonym: Spro_1070
Alternate gene names: 157369313
Gene position: 1180289-1179735 (Counterclockwise)
Preceding gene: 157369320
Following gene: 157369309
Centisome position: 21.66
GC content: 56.94
Gene sequence:
>555_bases ATGACAACCCGTTACCCCAAGATTTTCCTGCTCAGCACACTGGTGCTGCTGGCAGGCTGCGCGCAAACTCGCGAAGTGCC CAAGCTGCGTAATCAGGTGGTTGAGCTAAATCAGCAATTAACCACCCTGACTAACCAGGCCACGGCGCTGGAACAGCAAA ACCAGTTGAACAAGAACTCCACCAGCGGCGTCTATCTGCTGCCGGCAGCCAATAACGCCCCACGTTTGCAAAGCAGTCTC GGTGAACTGAGCGTGTCACTCAGCCACGTGAAAAGCGAGGCTAACGGCACCCAGGCCATGCTGCACGTTCGCACGCTATC GCAGGCCTCCCTGCCAGCGTTCAAAGCCATTGTCGAATGGGGCCAATTGGATGCGACCACCGGCAAACCACTGACGGCTG AAGCACTTTCGCAGCCGATCGTGAGCCAGGACTCATTGCTGCCCAAAACGGAATACAGTTTTGAGCTGCGTTTCAGCGGC CTGACACCGGATCAACTGGGCTATGTGCGACTGCACAGCGTAGAACCCACAACGGCAGCCGCCGCACAAAACTAA
Upstream 100 bases:
>100_bases GCGCCCCTATGAACGACGCCCCGGAAGGACAATCAACATGACTTTCCCCATCAGGCGGACTAAGCTGATAACAGGAGAAG TTGAATAGGAAATCCCCGCC
Downstream 100 bases:
>100_bases CCAGGCCAGGCCCACGTTCCCCCTTAGAGAAAGTGGGCCACCTGCTTAACCCAGCCGTTGCAACCTTGCCGGTAGCCCCT GGCGCACCGCCGCCCCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MTTRYPKIFLLSTLVLLAGCAQTREVPKLRNQVVELNQQLTTLTNQATALEQQNQLNKNSTSGVYLLPAANNAPRLQSSL GELSVSLSHVKSEANGTQAMLHVRTLSQASLPAFKAIVEWGQLDATTGKPLTAEALSQPIVSQDSLLPKTEYSFELRFSG LTPDQLGYVRLHSVEPTTAAAAQN
Sequences:
>Translated_184_residues MTTRYPKIFLLSTLVLLAGCAQTREVPKLRNQVVELNQQLTTLTNQATALEQQNQLNKNSTSGVYLLPAANNAPRLQSSL GELSVSLSHVKSEANGTQAMLHVRTLSQASLPAFKAIVEWGQLDATTGKPLTAEALSQPIVSQDSLLPKTEYSFELRFSG LTPDQLGYVRLHSVEPTTAAAAQN >Mature_183_residues TTRYPKIFLLSTLVLLAGCAQTREVPKLRNQVVELNQQLTTLTNQATALEQQNQLNKNSTSGVYLLPAANNAPRLQSSLG ELSVSLSHVKSEANGTQAMLHVRTLSQASLPAFKAIVEWGQLDATTGKPLTAEALSQPIVSQDSLLPKTEYSFELRFSGL TPDQLGYVRLHSVEPTTAAAAQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081734, Length=157, Percent_Identity=37.5796178343949, Blast_Score=116, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021658 [H]
Pfam domain/function: PF11622 DUF3251 [H]
EC number: NA
Molecular weight: Translated: 19930; Mature: 19799
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRYPKIFLLSTLVLLAGCAQTREVPKLRNQVVELNQQLTTLTNQATALEQQNQLNKNS CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TSGVYLLPAANNAPRLQSSLGELSVSLSHVKSEANGTQAMLHVRTLSQASLPAFKAIVEW CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHH GQLDATTGKPLTAEALSQPIVSQDSLLPKTEYSFELRFSGLTPDQLGYVRLHSVEPTTAA CCCCCCCCCCEEHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHH AAQN CCCC >Mature Secondary Structure TTRYPKIFLLSTLVLLAGCAQTREVPKLRNQVVELNQQLTTLTNQATALEQQNQLNKNS CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TSGVYLLPAANNAPRLQSSLGELSVSLSHVKSEANGTQAMLHVRTLSQASLPAFKAIVEW CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHH GQLDATTGKPLTAEALSQPIVSQDSLLPKTEYSFELRFSGLTPDQLGYVRLHSVEPTTAA CCCCCCCCCCEEHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHH AAQN CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503; 1406588; 7567469 [H]