| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is malZ [H]
Identifier: 157369292
GI number: 157369292
Start: 1154333
End: 1156156
Strand: Direct
Name: malZ [H]
Synonym: Spro_1049
Alternate gene names: 157369292
Gene position: 1154333-1156156 (Clockwise)
Preceding gene: 157369289
Following gene: 157369303
Centisome position: 21.18
GC content: 59.32
Gene sequence:
>1824_bases ATGCTTAACGCCTGGCATCAACCGGTCCCGCCCTTCGTGGTGAAGAAGGGGCAACGTCTTGATATCACGCTGTGGTTACA GGGTGATGATGTGCCCGAACGGGTGTTTTTACGCGCCGAACCGGATAATGAAGAATGGTTGCTGACGATGAAAGTGCAGC ATATTGACGGGCTGCATCGCTATCAGGCCAGTTTGACGCTCAATGAGGGGGAGCCAACCCGTCGTTACTGCTTCAAGCTG GTTTGGGCTGCCAGTCAGCAATGGTTCGGCCCCCAGGGTTGGTCGCTGACGCCGCCGGGGCAACTGGCGCAGTTTGCTGT CGACGTGCCCGACCGCAGCCCGGCCTGGGTGGCGGATCAGGTTTTCTATCAAATTTTCCCCGATCGCTTCTCCAGTAGCG GGGGGGAACATTGCATTCAAAGTGGCAGTTATCGCCATCATGCGGCCGGTTGCGATGTTGTGCGTCAGGATTGGCACCAT CCGTTGGAAGACCGGCATGCCGCGTCCACCTTCTATGGTGGCGATCTGGATGGCATCAGCCAAAAACTGCCTTATCTACA GCAGCTGGGCGTGACGGCGCTGTATCTGAATCCGATTTTCACCGCGCCCAGCGTACATAAATACGATACCGAAGATTATT ACCAGGTCGATCCCTATCTCGGCGGCAACGCCGCCCTGCAGCGTTTGCGAGTGAGTACTCACAAGGTGGGGATGAAACTG GTGCTGGACGGGGTGTTTAACCATACCGGCGATTCGCATCCGTGGTTTGACCGCCACCAGCAAGGGGATAACGGCGCTTG CCATCACCCCGATTCACCTTACCGTGGCTGGTTCAATTTTTACCCCGATGGCCGCGCGCTCGACTGGAAAGGGAATGCCA GTCTGCCGAAGCTTAACTTCGCTGAACCACAGGTAGCGGAAGCGATTTATCGCGGTGACGGTAGCGTGGTGCGTCACTGG TTACGGCCGCCGTACAACATCGACGGTTGGCGGCTGGATGTGGTGCACATGCTGGGTGAGAACGGGGGCGCTACCGGCAA TTTGCAGCATCTGGCGGGCATTTATCAGGCGGTTAAACAGGAAAACCCGCAGGCCTACGTGCTGGGCGAGCATTTTGGCG ACGCTCGTCGCTGGCTGCATGCCGGCGTGGAAGATGCGGCAATGAATTACATGGGCTTTGCCCTGCCGGTGCGGGGGTTC CTCGCCGGGCTGGACGTGGCGCACCACCCGGTGCAGCTGGATGCGGCGGACTGCGCCCAGTGGATGGACGGTTATCGGGC CGGGCTGCCGCATGGCCGTCAGTTGATTCAGTTCAACCAGCTCGACAGCCATGACACTGCGCGCTTTCTGACGCTATTAC AGGGCAATCAGGCGCGGATGCGCATGGCGGCGGTGTGGCTGATGAGCTGGATAGGCGTACCCTGCCTATATTATGGCGAC GAGATTGGTCTGGATGGGGCCAACGACCCGTTCTGTCGCAAGCCTTTTCCGTGGGATGAAAGCCAGTGGGATCAGAACCT GTTGGCCCTGTACCAGCGCATGGCGGCGCTGCGCAAACAGAGCCTGGCGCTGCGTCGCGGCGGTTGTCAGGTGCTGCATG CCGCCGCTGAAACGCTGGTATTTGTGCGTATTTACCAACAGGAACAGGTGTTGGTGGCGTTACAGCGTGACGGCAGCGGC AGCGTGACCCTGCCACACGGCCCGTTGCTGGCCGCAGGCCAATGGCAACGGCTGGAAGGGGATGGCGAGTTGAATGACAC GCAAAACGCGATCTCGCTGCAACTGGGCAAAGAGACGGTAAGCCTGTGGCGGTTAACAGGCTAA
Upstream 100 bases:
>100_bases GTTTACCGGCCAAAGAGGAGGGGGACTGGCACTCAACGTGGCATTGTTCGTGGCATTGAATAACGTCGTCGATTTCGTTT TGTACAGCAGGAGGAAAGTC
Downstream 100 bases:
>100_bases TCTGGCCAGGCTCCCCTTAAAAAACCTGCCCCCAGTTGGCCAACAGCGTCTGCGCCTGTCCGGGCGCAGACCTGAACAAG TCTACCGCACTGCATAACCT
Product: maltodextrin glucosidase
Products: NA
Alternate protein names: Alpha-glucosidase [H]
Number of amino acids: Translated: 607; Mature: 607
Protein sequence:
>607_residues MLNAWHQPVPPFVVKKGQRLDITLWLQGDDVPERVFLRAEPDNEEWLLTMKVQHIDGLHRYQASLTLNEGEPTRRYCFKL VWAASQQWFGPQGWSLTPPGQLAQFAVDVPDRSPAWVADQVFYQIFPDRFSSSGGEHCIQSGSYRHHAAGCDVVRQDWHH PLEDRHAASTFYGGDLDGISQKLPYLQQLGVTALYLNPIFTAPSVHKYDTEDYYQVDPYLGGNAALQRLRVSTHKVGMKL VLDGVFNHTGDSHPWFDRHQQGDNGACHHPDSPYRGWFNFYPDGRALDWKGNASLPKLNFAEPQVAEAIYRGDGSVVRHW LRPPYNIDGWRLDVVHMLGENGGATGNLQHLAGIYQAVKQENPQAYVLGEHFGDARRWLHAGVEDAAMNYMGFALPVRGF LAGLDVAHHPVQLDAADCAQWMDGYRAGLPHGRQLIQFNQLDSHDTARFLTLLQGNQARMRMAAVWLMSWIGVPCLYYGD EIGLDGANDPFCRKPFPWDESQWDQNLLALYQRMAALRKQSLALRRGGCQVLHAAAETLVFVRIYQQEQVLVALQRDGSG SVTLPHGPLLAAGQWQRLEGDGELNDTQNAISLQLGKETVSLWRLTG
Sequences:
>Translated_607_residues MLNAWHQPVPPFVVKKGQRLDITLWLQGDDVPERVFLRAEPDNEEWLLTMKVQHIDGLHRYQASLTLNEGEPTRRYCFKL VWAASQQWFGPQGWSLTPPGQLAQFAVDVPDRSPAWVADQVFYQIFPDRFSSSGGEHCIQSGSYRHHAAGCDVVRQDWHH PLEDRHAASTFYGGDLDGISQKLPYLQQLGVTALYLNPIFTAPSVHKYDTEDYYQVDPYLGGNAALQRLRVSTHKVGMKL VLDGVFNHTGDSHPWFDRHQQGDNGACHHPDSPYRGWFNFYPDGRALDWKGNASLPKLNFAEPQVAEAIYRGDGSVVRHW LRPPYNIDGWRLDVVHMLGENGGATGNLQHLAGIYQAVKQENPQAYVLGEHFGDARRWLHAGVEDAAMNYMGFALPVRGF LAGLDVAHHPVQLDAADCAQWMDGYRAGLPHGRQLIQFNQLDSHDTARFLTLLQGNQARMRMAAVWLMSWIGVPCLYYGD EIGLDGANDPFCRKPFPWDESQWDQNLLALYQRMAALRKQSLALRRGGCQVLHAAAETLVFVRIYQQEQVLVALQRDGSG SVTLPHGPLLAAGQWQRLEGDGELNDTQNAISLQLGKETVSLWRLTG >Mature_607_residues MLNAWHQPVPPFVVKKGQRLDITLWLQGDDVPERVFLRAEPDNEEWLLTMKVQHIDGLHRYQASLTLNEGEPTRRYCFKL VWAASQQWFGPQGWSLTPPGQLAQFAVDVPDRSPAWVADQVFYQIFPDRFSSSGGEHCIQSGSYRHHAAGCDVVRQDWHH PLEDRHAASTFYGGDLDGISQKLPYLQQLGVTALYLNPIFTAPSVHKYDTEDYYQVDPYLGGNAALQRLRVSTHKVGMKL VLDGVFNHTGDSHPWFDRHQQGDNGACHHPDSPYRGWFNFYPDGRALDWKGNASLPKLNFAEPQVAEAIYRGDGSVVRHW LRPPYNIDGWRLDVVHMLGENGGATGNLQHLAGIYQAVKQENPQAYVLGEHFGDARRWLHAGVEDAAMNYMGFALPVRGF LAGLDVAHHPVQLDAADCAQWMDGYRAGLPHGRQLIQFNQLDSHDTARFLTLLQGNQARMRMAAVWLMSWIGVPCLYYGD EIGLDGANDPFCRKPFPWDESQWDQNLLALYQRMAALRKQSLALRRGGCQVLHAAAETLVFVRIYQQEQVLVALQRDGSG SVTLPHGPLLAAGQWQRLEGDGELNDTQNAISLQLGKETVSLWRLTG
Specific function: May play a role in regulating the intracellular level of maltotriose. Cleaves glucose from the reducing end of maltotriose and longer maltodextrins with a chain length of up to 7 glucose units [H]
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI187423904, Length=469, Percent_Identity=23.0277185501066, Blast_Score=82, Evalue=1e-15, Organism=Escherichia coli, GI1786604, Length=589, Percent_Identity=60.4414261460102, Blast_Score=743, Evalue=0.0, Organism=Escherichia coli, GI1790687, Length=415, Percent_Identity=23.3734939759036, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1789995, Length=96, Percent_Identity=38.5416666666667, Blast_Score=66, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6321726, Length=256, Percent_Identity=26.171875, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6322241, Length=265, Percent_Identity=24.9056603773585, Blast_Score=80, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6322021, Length=265, Percent_Identity=24.9056603773585, Blast_Score=80, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6324416, Length=265, Percent_Identity=24.9056603773585, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6322245, Length=202, Percent_Identity=29.2079207920792, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6321731, Length=176, Percent_Identity=28.9772727272727, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6319776, Length=176, Percent_Identity=28.9772727272727, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24586589, Length=196, Percent_Identity=33.6734693877551, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI24586593, Length=556, Percent_Identity=23.021582733813, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI24586587, Length=198, Percent_Identity=30.8080808080808, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI24586599, Length=500, Percent_Identity=24, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI24586591, Length=249, Percent_Identity=26.1044176706827, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI24586597, Length=191, Percent_Identity=30.8900523560209, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI24583745, Length=422, Percent_Identity=22.2748815165877, Blast_Score=80, Evalue=5e-15, Organism=Drosophila melanogaster, GI24583747, Length=250, Percent_Identity=27.6, Blast_Score=79, Evalue=7e-15, Organism=Drosophila melanogaster, GI24583749, Length=250, Percent_Identity=27.6, Blast_Score=79, Evalue=7e-15, Organism=Drosophila melanogaster, GI45549022, Length=190, Percent_Identity=28.4210526315789, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI221330053, Length=186, Percent_Identity=29.0322580645161, Blast_Score=77, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR004185 - InterPro: IPR006589 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013783 - InterPro: IPR014756 - InterPro: IPR017069 [H]
Pfam domain/function: PF00128 Alpha-amylase; PF02903 Alpha-amylase_N [H]
EC number: =3.2.1.20 [H]
Molecular weight: Translated: 68410; Mature: 68410
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNAWHQPVPPFVVKKGQRLDITLWLQGDDVPERVFLRAEPDNEEWLLTMKVQHIDGLHR CCCCCCCCCCHHHHCCCCEEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEHHCCCHHH YQASLTLNEGEPTRRYCFKLVWAASQQWFGPQGWSLTPPGQLAQFAVDVPDRSPAWVADQ EEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEECCCCCCCHHHHH VFYQIFPDRFSSSGGEHCIQSGSYRHHAAGCDVVRQDWHHPLEDRHAASTFYGGDLDGIS HHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCHHHHH QKLPYLQQLGVTALYLNPIFTAPSVHKYDTEDYYQVDPYLGGNAALQRLRVSTHKVGMKL HHCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHH VLDGVFNHTGDSHPWFDRHQQGDNGACHHPDSPYRGWFNFYPDGRALDWKGNASLPKLNF HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCC AEPQVAEAIYRGDGSVVRHWLRPPYNIDGWRLDVVHMLGENGGATGNLQHLAGIYQAVKQ CCHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHC ENPQAYVLGEHFGDARRWLHAGVEDAAMNYMGFALPVRGFLAGLDVAHHPVQLDAADCAQ CCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHH WMDGYRAGLPHGRQLIQFNQLDSHDTARFLTLLQGNQARMRMAAVWLMSWIGVPCLYYGD HHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECC EIGLDGANDPFCRKPFPWDESQWDQNLLALYQRMAALRKQSLALRRGGCQVLHAAAETLV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEE FVRIYQQEQVLVALQRDGSGSVTLPHGPLLAAGQWQRLEGDGELNDTQNAISLQLGKETV EEEEECCCEEEEEEEECCCCCEECCCCCEEECCCCEEECCCCCCCCCCCEEEEEECHHEE SLWRLTG EEEEECC >Mature Secondary Structure MLNAWHQPVPPFVVKKGQRLDITLWLQGDDVPERVFLRAEPDNEEWLLTMKVQHIDGLHR CCCCCCCCCCHHHHCCCCEEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEHHCCCHHH YQASLTLNEGEPTRRYCFKLVWAASQQWFGPQGWSLTPPGQLAQFAVDVPDRSPAWVADQ EEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEECCCCCCCHHHHH VFYQIFPDRFSSSGGEHCIQSGSYRHHAAGCDVVRQDWHHPLEDRHAASTFYGGDLDGIS HHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCHHHHH QKLPYLQQLGVTALYLNPIFTAPSVHKYDTEDYYQVDPYLGGNAALQRLRVSTHKVGMKL HHCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHH VLDGVFNHTGDSHPWFDRHQQGDNGACHHPDSPYRGWFNFYPDGRALDWKGNASLPKLNF HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCC AEPQVAEAIYRGDGSVVRHWLRPPYNIDGWRLDVVHMLGENGGATGNLQHLAGIYQAVKQ CCHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHC ENPQAYVLGEHFGDARRWLHAGVEDAAMNYMGFALPVRGFLAGLDVAHHPVQLDAADCAQ CCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHH WMDGYRAGLPHGRQLIQFNQLDSHDTARFLTLLQGNQARMRMAAVWLMSWIGVPCLYYGD HHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECC EIGLDGANDPFCRKPFPWDESQWDQNLLALYQRMAALRKQSLALRRGGCQVLHAAAETLV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEE FVRIYQQEQVLVALQRDGSGSVTLPHGPLLAAGQWQRLEGDGELNDTQNAISLQLGKETV EEEEECCCEEEEEEEECCCCCEECCCCCEEECCCCEEECCCCCCCCCCCEEEEEECHHEE SLWRLTG EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1918057; 9278503; 1706703 [H]