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The map label for this gene is yfiB [H]

Identifier: 157368917

GI number: 157368917

Start: 739909

End: 740406

Strand: Reverse

Name: yfiB [H]

Synonym: Spro_0672

Alternate gene names: 157368917

Gene position: 740406-739909 (Counterclockwise)

Preceding gene: 157368918

Following gene: 157368916

Centisome position: 13.59

GC content: 56.22

Gene sequence:

>498_bases
ATGATACAGCAAACACTAAAAAACCGTTTTTCACTGCTGGCGATGATGTTTATCGCCCTGCTGGCCCTCACCGGCTGCCA
GAGCAAACCTCAGGGCCTGACGCCCGAGCAAATTGCCCTGTTGCAGTCGCAAGGGTTCAAGCTGACCGATAACGGCTGGG
AATTTGGCCTGTCCGACAAAGTGCTGTTTGGCAATAACATCGGCAAGCTGAACCCGGAAAGTACCGACACGGTACAGAAA
ATGGGCCGCGCATTGATGAGCGTCGGTATCACTCAGTTCCGTCTGGATGGTCATACGGATAATTACGGTGAAGACAGCTA
TAACGATCAGCTCTCTCTGCGTCGCGCCAATGCTGTGGCGGATCTGCTCGCCAGCGTAGGCATTCCACGTGCCAACATCG
AAACCCGCGGCATGGGTAAACGCGATCCGGTGGCCGATAACCGCACCTCCAGCGGCCGGGCGGAAAACCGCCGCGTCGCG
ATAGTCGTCACCCCTTAA

Upstream 100 bases:

>100_bases
CGATGCGATGTACCAGGCAAAGCATCGTTATAACGGAGGCTGGCGGCTGGCAATACAAAAATAAGGCCCCGGCTAAAAAA
TAAAACTAGGGATTTTGATT

Downstream 100 bases:

>100_bases
GTGACCAATATGCGCCTTCACCGGCGCATAAAAGGTTATACTTAGCGATCGCTGTGTGATGTCTGGGATCCGCTGTCGAA
ACGGGCTACACTCCGCAGCC

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MIQQTLKNRFSLLAMMFIALLALTGCQSKPQGLTPEQIALLQSQGFKLTDNGWEFGLSDKVLFGNNIGKLNPESTDTVQK
MGRALMSVGITQFRLDGHTDNYGEDSYNDQLSLRRANAVADLLASVGIPRANIETRGMGKRDPVADNRTSSGRAENRRVA
IVVTP

Sequences:

>Translated_165_residues
MIQQTLKNRFSLLAMMFIALLALTGCQSKPQGLTPEQIALLQSQGFKLTDNGWEFGLSDKVLFGNNIGKLNPESTDTVQK
MGRALMSVGITQFRLDGHTDNYGEDSYNDQLSLRRANAVADLLASVGIPRANIETRGMGKRDPVADNRTSSGRAENRRVA
IVVTP
>Mature_165_residues
MIQQTLKNRFSLLAMMFIALLALTGCQSKPQGLTPEQIALLQSQGFKLTDNGWEFGLSDKVLFGNNIGKLNPESTDTVQK
MGRALMSVGITQFRLDGHTDNYGEDSYNDQLSLRRANAVADLLASVGIPRANIETRGMGKRDPVADNRTSSGRAENRRVA
IVVTP

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788957, Length=155, Percent_Identity=56.7741935483871, Blast_Score=175, Evalue=1e-45,
Organism=Escherichia coli, GI48994946, Length=127, Percent_Identity=30.7086614173228, Blast_Score=67, Evalue=4e-13,
Organism=Escherichia coli, GI1787191, Length=121, Percent_Identity=35.5371900826446, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 18055; Mature: 18055

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQQTLKNRFSLLAMMFIALLALTGCQSKPQGLTPEQIALLQSQGFKLTDNGWEFGLSDK
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEECCCCCEECCCCC
VLFGNNIGKLNPESTDTVQKMGRALMSVGITQFRLDGHTDNYGEDSYNDQLSLRRANAVA
EEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH
DLLASVGIPRANIETRGMGKRDPVADNRTSSGRAENRRVAIVVTP
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MIQQTLKNRFSLLAMMFIALLALTGCQSKPQGLTPEQIALLQSQGFKLTDNGWEFGLSDK
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEECCCCCEECCCCC
VLFGNNIGKLNPESTDTVQKMGRALMSVGITQFRLDGHTDNYGEDSYNDQLSLRRANAVA
EEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH
DLLASVGIPRANIETRGMGKRDPVADNRTSSGRAENRRVAIVVTP
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6357787; 9205837; 9278503; 6298574 [H]