| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is yjjK [H]
Identifier: 157368916
GI number: 157368916
Start: 738101
End: 739768
Strand: Reverse
Name: yjjK [H]
Synonym: Spro_0671
Alternate gene names: 157368916
Gene position: 739768-738101 (Counterclockwise)
Preceding gene: 157368917
Following gene: 157368914
Centisome position: 13.58
GC content: 57.19
Gene sequence:
>1668_bases GTGGCTCAATACGTCTATACCATGCATCGCGTCGGCAAAGTGGTTCCGCCGAAGCGTCACATTCTGAAAAACATCTCGCT GAGCTTCTTCCCTGGCGCCAAAATTGGTGTGCTGGGTCTGAACGGCTCGGGTAAATCCACTCTGTTGCGCATCATGGCCG GCATCGATACCGATATCGAAGGTGAAGCTCGCCCACAACAAGGGATTAAGATCGGTTACCTGCCGCAGGAACCGCAGCTG AACCTCGAGCATACTGTCCGTGAGTCGGTCGAAGAAGCGCTGGCAGAAGTGGTCGGTGCGCTGAAACGCCTTGATGAAGT GTACGCACTGTACGCCGAAGAAGGTGCCGATTTCGACAAGCTGGCCGCTGAGCAGGGCCGCCTGGAAGAGATCATTCAGG CCCATGATGGCCACAACCTGAACACCCAGCTGGAGCGCGCCGCCGATGCGCTGCGCCTGCCGGAGTGGGACGCGAAAATC GCCAACCTTTCCGGTGGTGAACGTCGCCGTGTCGCTCTGTGCCGCCTGCTGCTGGAAAAACCGGACATGCTGCTGCTGGA CGAACCGACCAACCACCTGGATGCCGAATCCGTGGCCTGGCTGGAACGCTTCCTGCATGACTTCGAAGGCACCGTAGTGG CCATTACCCACGACCGTTACTTCCTCGACAACGTGGCCGGCTGGATCCTCGAGCTGGACCGTGGCGAAGGTATCCCATGG GAAGGCAACTACTCTTCCTGGCTGGAGCAAAAAGACGCTCGTCTGGCGCAGGAAGCCTCTTCCGAAGCCGCACGTCGCAA ATCCATCGAGAAAGAGCTGGAGTGGGTTCGTCAGGGCGCCAAAGGCCGTCAGTCCAAAGGCAAGGCCCGTTTGGCTCGCT TTGAAGAGCTCAACAGCACCGAATACCAAAAGCGTAACGAAACCAACGAACTGTTTATCCCACCTGGCGCACGCCTGGGC GATAAAGTGGTTGAAGTCAGTAACCTGCGTAAGTCTTACGGCGACCGCGTGCTGATTGATGACCTGACCTTTGCAGTACC GAAAGGCGCGATTGTTGGCATTATCGGCCCGAACGGCGCCGGTAAGTCTACGCTGTTCCGCATGATGTCCGGCCAGGAAC AACCTGATTCCGGCAGCATCGTGTTGGGTGACACCGTCAAACTGGCCTCGGTCGATCAGTTCCGCGACAGCATGGATAAT TCCAAAACCGTTTGGGAAGAAGTTTCCGGCGGCCAGGACATCATGCGTATCGGCAACACCGAAATGCCAAGCCGTGCCTA TGTTGGCCGCTTCAACTTCAAGGGTGTCGATCAGGGCAAACGCGTCGGCGAATTGTCCGGTGGTGAGCGTGGCCGTCTGC ATCTGGCCAAGCTGCTGCAGGTTGGCGGCAACGTATTGCTGCTCGATGAACCGACCAACGACCTGGATATCGAAACCCTG CGCGCGCTGGAAAACGCCCTGTTGGAATTCCCAGGCTGTGCGATGGTCATCTCGCACGACCGTTGGTTCCTTGACCGCAT CGCCACCCACATTCTGGATTATCAGGATGAAGGCAATGTGGAATTCTTCGAAGGTAACTTTACCGAATACGAAGAGTACA AGAAACGGACGCTGGGCGCCGAAGCGCTTGAGCCACACCGTATCAAGTACAAGCGAATCGCCAAGTAA
Upstream 100 bases:
>100_bases CTTAGCGATCGCTGTGTGATGTCTGGGATCCGCTGTCGAAACGGGCTACACTCCGCAGCCAGACATCCTATAAAAACTGA TATAGAGAGGCAGAGGCACC
Downstream 100 bases:
>100_bases TCCCGGAAAGCGCCGCAGGCGGCGCTTGAGTTTGATGACTGAGTTGTCTTTGAAACCGAGATACTCGGGCCTAGCGCACC GAGGGGCACTCCGGCGGGCA
Product: putative ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MAQYVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGSGKSTLLRIMAGIDTDIEGEARPQQGIKIGYLPQEPQL NLEHTVRESVEEALAEVVGALKRLDEVYALYAEEGADFDKLAAEQGRLEEIIQAHDGHNLNTQLERAADALRLPEWDAKI ANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPW EGNYSSWLEQKDARLAQEASSEAARRKSIEKELEWVRQGAKGRQSKGKARLARFEELNSTEYQKRNETNELFIPPGARLG DKVVEVSNLRKSYGDRVLIDDLTFAVPKGAIVGIIGPNGAGKSTLFRMMSGQEQPDSGSIVLGDTVKLASVDQFRDSMDN SKTVWEEVSGGQDIMRIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNVLLLDEPTNDLDIETL RALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGNVEFFEGNFTEYEEYKKRTLGAEALEPHRIKYKRIAK
Sequences:
>Translated_555_residues MAQYVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGSGKSTLLRIMAGIDTDIEGEARPQQGIKIGYLPQEPQL NLEHTVRESVEEALAEVVGALKRLDEVYALYAEEGADFDKLAAEQGRLEEIIQAHDGHNLNTQLERAADALRLPEWDAKI ANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPW EGNYSSWLEQKDARLAQEASSEAARRKSIEKELEWVRQGAKGRQSKGKARLARFEELNSTEYQKRNETNELFIPPGARLG DKVVEVSNLRKSYGDRVLIDDLTFAVPKGAIVGIIGPNGAGKSTLFRMMSGQEQPDSGSIVLGDTVKLASVDQFRDSMDN SKTVWEEVSGGQDIMRIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNVLLLDEPTNDLDIETL RALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGNVEFFEGNFTEYEEYKKRTLGAEALEPHRIKYKRIAK >Mature_554_residues AQYVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGSGKSTLLRIMAGIDTDIEGEARPQQGIKIGYLPQEPQLN LEHTVRESVEEALAEVVGALKRLDEVYALYAEEGADFDKLAAEQGRLEEIIQAHDGHNLNTQLERAADALRLPEWDAKIA NLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWE GNYSSWLEQKDARLAQEASSEAARRKSIEKELEWVRQGAKGRQSKGKARLARFEELNSTEYQKRNETNELFIPPGARLGD KVVEVSNLRKSYGDRVLIDDLTFAVPKGAIVGIIGPNGAGKSTLFRMMSGQEQPDSGSIVLGDTVKLASVDQFRDSMDNS KTVWEEVSGGQDIMRIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNVLLLDEPTNDLDIETLR ALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGNVEFFEGNFTEYEEYKKRTLGAEALEPHRIKYKRIAK
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI27881506, Length=545, Percent_Identity=30.0917431192661, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI10947137, Length=545, Percent_Identity=30.0917431192661, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI148612853, Length=521, Percent_Identity=27.2552783109405, Blast_Score=167, Evalue=3e-41, Organism=Homo sapiens, GI69354671, Length=543, Percent_Identity=28.5451197053407, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI10947135, Length=543, Percent_Identity=28.5451197053407, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI31657092, Length=186, Percent_Identity=29.0322580645161, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI9955968, Length=235, Percent_Identity=25.9574468085106, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI9955966, Length=244, Percent_Identity=26.2295081967213, Blast_Score=67, Evalue=6e-11, Organism=Homo sapiens, GI45243524, Length=244, Percent_Identity=26.2295081967213, Blast_Score=67, Evalue=6e-11, Organism=Escherichia coli, GI2367384, Length=555, Percent_Identity=93.8738738738739, Blast_Score=1073, Evalue=0.0, Organism=Escherichia coli, GI1787182, Length=516, Percent_Identity=34.3023255813954, Blast_Score=270, Evalue=1e-73, Organism=Escherichia coli, GI1789751, Length=535, Percent_Identity=32.1495327102804, Blast_Score=233, Evalue=3e-62, Organism=Escherichia coli, GI1787041, Length=520, Percent_Identity=30.1923076923077, Blast_Score=223, Evalue=3e-59, Organism=Escherichia coli, GI87081782, Length=569, Percent_Identity=26.0105448154657, Blast_Score=113, Evalue=3e-26, Organism=Escherichia coli, GI87081709, Length=193, Percent_Identity=28.4974093264249, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI48994943, Length=481, Percent_Identity=24.948024948025, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI87081791, Length=198, Percent_Identity=32.3232323232323, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1788761, Length=217, Percent_Identity=27.1889400921659, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI1790739, Length=169, Percent_Identity=36.094674556213, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1788225, Length=221, Percent_Identity=27.6018099547511, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1786975, Length=345, Percent_Identity=25.7971014492754, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1786345, Length=237, Percent_Identity=29.957805907173, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1789891, Length=267, Percent_Identity=26.5917602996255, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1788897, Length=224, Percent_Identity=29.4642857142857, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1787089, Length=224, Percent_Identity=25, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1787370, Length=193, Percent_Identity=25.9067357512953, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1786703, Length=225, Percent_Identity=32, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1788644, Length=233, Percent_Identity=27.8969957081545, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI1787105, Length=205, Percent_Identity=27.8048780487805, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI87081834, Length=214, Percent_Identity=27.5700934579439, Blast_Score=66, Evalue=7e-12, Organism=Escherichia coli, GI1787164, Length=180, Percent_Identity=29.4444444444444, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI1786698, Length=164, Percent_Identity=29.2682926829268, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1786563, Length=188, Percent_Identity=25.531914893617, Blast_Score=63, Evalue=6e-11, Organism=Escherichia coli, GI1788472, Length=206, Percent_Identity=26.6990291262136, Blast_Score=62, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17559834, Length=539, Percent_Identity=27.0871985157699, Blast_Score=179, Evalue=5e-45, Organism=Caenorhabditis elegans, GI17555318, Length=550, Percent_Identity=25.4545454545455, Blast_Score=175, Evalue=5e-44, Organism=Caenorhabditis elegans, GI17553372, Length=540, Percent_Identity=28.7037037037037, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17565938, Length=211, Percent_Identity=30.3317535545024, Blast_Score=72, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17569143, Length=260, Percent_Identity=25.3846153846154, Blast_Score=66, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=540, Percent_Identity=28.1481481481481, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6320874, Length=533, Percent_Identity=30.0187617260788, Blast_Score=184, Evalue=4e-47, Organism=Saccharomyces cerevisiae, GI6323278, Length=394, Percent_Identity=25.8883248730964, Blast_Score=114, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6324314, Length=385, Percent_Identity=25.974025974026, Blast_Score=110, Evalue=5e-25, Organism=Saccharomyces cerevisiae, GI6325030, Length=375, Percent_Identity=27.4666666666667, Blast_Score=104, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6320266, Length=380, Percent_Identity=22.3684210526316, Blast_Score=72, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6322980, Length=288, Percent_Identity=26.7361111111111, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323959, Length=166, Percent_Identity=30.1204819277108, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24666836, Length=529, Percent_Identity=29.6786389413989, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24642252, Length=544, Percent_Identity=28.125, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI18859989, Length=544, Percent_Identity=28.125, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24641342, Length=546, Percent_Identity=28.2051282051282, Blast_Score=175, Evalue=6e-44, Organism=Drosophila melanogaster, GI281363262, Length=188, Percent_Identity=26.063829787234, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24653245, Length=188, Percent_Identity=26.063829787234, Blast_Score=71, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022374 - InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 62178; Mature: 62047
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQYVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGSGKSTLLRIMAGIDTDIE CCCHHHHHHHHCCCCCCHHHHHHHCCEEECCCCEEEEEEECCCCHHHHHHHHHCCCCCCC GEARPQQGIKIGYLPQEPQLNLEHTVRESVEEALAEVVGALKRLDEVYALYAEEGADFDK CCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LAAEQGRLEEIIQAHDGHNLNTQLERAADALRLPEWDAKIANLSGGERRRVALCRLLLEK HHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHCC PDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPW CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHEEEEECCCCCCC EGNYSSWLEQKDARLAQEASSEAARRKSIEKELEWVRQGAKGRQSKGKARLARFEELNST CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCH EYQKRNETNELFIPPGARLGDKVVEVSNLRKSYGDRVLIDDLTFAVPKGAIVGIIGPNGA HHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEECHHHCCCCCCEEEEECCCCC GKSTLFRMMSGQEQPDSGSIVLGDTVKLASVDQFRDSMDNSKTVWEEVSGGQDIMRIGNT CHHHHHHHHCCCCCCCCCCEEECCCEEHHHHHHHHHHCCCCHHHHHHHCCCHHHHHCCCC EMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNVLLLDEPTNDLDIETL CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHH RALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGNVEFFEGNFTEYEEYKKRTLGA HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCC EALEPHRIKYKRIAK CCCCCCHHHHHHCCC >Mature Secondary Structure AQYVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGSGKSTLLRIMAGIDTDIE CCHHHHHHHHCCCCCCHHHHHHHCCEEECCCCEEEEEEECCCCHHHHHHHHHCCCCCCC GEARPQQGIKIGYLPQEPQLNLEHTVRESVEEALAEVVGALKRLDEVYALYAEEGADFDK CCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LAAEQGRLEEIIQAHDGHNLNTQLERAADALRLPEWDAKIANLSGGERRRVALCRLLLEK HHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHCC PDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPW CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHEEEEECCCCCCC EGNYSSWLEQKDARLAQEASSEAARRKSIEKELEWVRQGAKGRQSKGKARLARFEELNST CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCH EYQKRNETNELFIPPGARLGDKVVEVSNLRKSYGDRVLIDDLTFAVPKGAIVGIIGPNGA HHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEECHHHCCCCCCEEEEECCCCC GKSTLFRMMSGQEQPDSGSIVLGDTVKLASVDQFRDSMDNSKTVWEEVSGGQDIMRIGNT CHHHHHHHHCCCCCCCCCCEEECCCEEHHHHHHHHHHCCCCHHHHHHHCCCHHHHHCCCC EMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNVLLLDEPTNDLDIETL CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHH RALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGNVEFFEGNFTEYEEYKKRTLGA HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCC EALEPHRIKYKRIAK CCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]