| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ampH [H]
Identifier: 157368881
GI number: 157368881
Start: 701674
End: 702816
Strand: Reverse
Name: ampH [H]
Synonym: Spro_0636
Alternate gene names: 157368881
Gene position: 702816-701674 (Counterclockwise)
Preceding gene: 157368882
Following gene: 157368869
Centisome position: 12.9
GC content: 60.19
Gene sequence:
>1143_bases TTGAAGAACTCTTTCTCCGCTTCATTGCTGGCGCTGAGCCTGTGTGCCGCCCCGCTGGCCGCGCAGGCCGCCGCCCCGCA GCTGGCCTCGCAAATCGTCGACCAGTATGCCGAACATATTTTCTACAACAGCGGTGCCACCGGTATGGCGCTGGTGGTGA TCGACGGTAACCAGGTGGTTAACCGCAGTTTTGGCGACACCAAACCCGGCAATAACCTGCGCCCACGCCCGGACTCGCTG ATCCGCATTGCCTCAATCACCAAACTGATGACCAGTGAAGTGATGGTCAAGATGGCGGCGGAAGGCCGGGTCAAGCTCAA CGATCCGTTGCGCAAATATGCCCCCCAAGGTGCTTACGTGCCGGCCTATAACACACGCCAGCCGATCACTTTGCTGAACC TGGCAACCCACACCAGCGCCCTGCCGCGTGAACAGCCGGGCAAGAAGCCGCCAAAAACGCCGGTCTTTACCTGGCCGACC AAGGCACAGCGCTGGCAGTGGCTGGAACATGCCAACGTCACGGTGCCACCGGGCGTGCGCGCCTCTTATTCCAACCTGGC GTACGACCTGCTGGCGGATGCACTGTCGCGGGCGGCGGGTAAACCTTACACCGCGCTGCTGAAGGAAAAAATCACCGCAC CGCTCGGCATGGTCGACACCACTCTCACCCCAAGTGCCGAACAGTGCTCACGCCTGATGGTGGCTTCCGCCGGCCCGAGT GCCTGCCGTGACACCACAGCCGCGGCCGGTAGCGGCGGCGTTTACTCCACCCCGCGCGACATGCAGCGCTGGATGCAGCA ATTCCTTACCTCCAATGTCTCTGGCTCACGTAAATCGACCGCCGCCAGCGAACAGACCATGTACTTCCAACGCAACGATC TGGTCTCGCTAAAAGGCATGGACGTGCCGGGTGAAGCCAGCGCGTTAGGATTGGGCTGGGTGTATATGGCACCGAACGGC GAACTGCCGGGGATTATTCAGAAAACCGGCGGTGGCGGCGGCTTTATTACCTATATGGCGATGATCCCGCAGAAAAACGT CGGGGTATTTGTGGTGGTGACCCGCTCGGAACTGAGCAAGTTCACCAACATGAGCGATCCTGTGAACCGACTGGTGAGTG ATTTGGCGGCGAATAAAAGTTGA
Upstream 100 bases:
>100_bases GCAGCCAGGGCCGAGGCACATTACACTGACAGCCTATTACGCCGTGTCATGCCACGGCCCAGGCCTTTTCCCTGCTGCCT TTTAAAATGGATAACGACCG
Downstream 100 bases:
>100_bases TGTTATCGGGCGCAGCGGTGAGCTGCGCCCATTAGGGTCAGGCCAGAGCCAGCCTTTCGTGCATTACCGGATGGAAGTTG CGCTTGAAGTAGATCAGGCC
Product: beta-lactam binding protein AmpH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MKNSFSASLLALSLCAAPLAAQAAAPQLASQIVDQYAEHIFYNSGATGMALVVIDGNQVVNRSFGDTKPGNNLRPRPDSL IRIASITKLMTSEVMVKMAAEGRVKLNDPLRKYAPQGAYVPAYNTRQPITLLNLATHTSALPREQPGKKPPKTPVFTWPT KAQRWQWLEHANVTVPPGVRASYSNLAYDLLADALSRAAGKPYTALLKEKITAPLGMVDTTLTPSAEQCSRLMVASAGPS ACRDTTAAAGSGGVYSTPRDMQRWMQQFLTSNVSGSRKSTAASEQTMYFQRNDLVSLKGMDVPGEASALGLGWVYMAPNG ELPGIIQKTGGGGGFITYMAMIPQKNVGVFVVVTRSELSKFTNMSDPVNRLVSDLAANKS
Sequences:
>Translated_380_residues MKNSFSASLLALSLCAAPLAAQAAAPQLASQIVDQYAEHIFYNSGATGMALVVIDGNQVVNRSFGDTKPGNNLRPRPDSL IRIASITKLMTSEVMVKMAAEGRVKLNDPLRKYAPQGAYVPAYNTRQPITLLNLATHTSALPREQPGKKPPKTPVFTWPT KAQRWQWLEHANVTVPPGVRASYSNLAYDLLADALSRAAGKPYTALLKEKITAPLGMVDTTLTPSAEQCSRLMVASAGPS ACRDTTAAAGSGGVYSTPRDMQRWMQQFLTSNVSGSRKSTAASEQTMYFQRNDLVSLKGMDVPGEASALGLGWVYMAPNG ELPGIIQKTGGGGGFITYMAMIPQKNVGVFVVVTRSELSKFTNMSDPVNRLVSDLAANKS >Mature_380_residues MKNSFSASLLALSLCAAPLAAQAAAPQLASQIVDQYAEHIFYNSGATGMALVVIDGNQVVNRSFGDTKPGNNLRPRPDSL IRIASITKLMTSEVMVKMAAEGRVKLNDPLRKYAPQGAYVPAYNTRQPITLLNLATHTSALPREQPGKKPPKTPVFTWPT KAQRWQWLEHANVTVPPGVRASYSNLAYDLLADALSRAAGKPYTALLKEKITAPLGMVDTTLTPSAEQCSRLMVASAGPS ACRDTTAAAGSGGVYSTPRDMQRWMQQFLTSNVSGSRKSTAASEQTMYFQRNDLVSLKGMDVPGEASALGLGWVYMAPNG ELPGIIQKTGGGGGFITYMAMIPQKNVGVFVVVTRSELSKFTNMSDPVNRLVSDLAANKS
Specific function: Binds penicillin and contributes to the normal morphology [H]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI239747261, Length=357, Percent_Identity=25.7703081232493, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI239752721, Length=357, Percent_Identity=25.7703081232493, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI239741085, Length=357, Percent_Identity=25.7703081232493, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1786574, Length=381, Percent_Identity=64.5669291338583, Blast_Score=490, Evalue=1e-140, Organism=Escherichia coli, GI1790593, Length=388, Percent_Identity=23.9690721649485, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 40716; Mature: 40716
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSFSASLLALSLCAAPLAAQAAAPQLASQIVDQYAEHIFYNSGATGMALVVIDGNQVV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCHHC NRSFGDTKPGNNLRPRPDSLIRIASITKLMTSEVMVKMAAEGRVKLNDPLRKYAPQGAYV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHCCCCCCC PAYNTRQPITLLNLATHTSALPREQPGKKPPKTPVFTWPTKAQRWQWLEHANVTVPPGVR CCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCC ASYSNLAYDLLADALSRAAGKPYTALLKEKITAPLGMVDTTLTPSAEQCSRLMVASAGPS CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCH ACRDTTAAAGSGGVYSTPRDMQRWMQQFLTSNVSGSRKSTAASEQTMYFQRNDLVSLKGM HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCHHHHEEEECCCEEEEECC DVPGEASALGLGWVYMAPNGELPGIIQKTGGGGGFITYMAMIPQKNVGVFVVVTRSELSK CCCCCCCEEEEEEEEECCCCCCCCEEEECCCCCCEEEEEEECCCCCCCEEEEEEHHHHHH FTNMSDPVNRLVSDLAANKS HCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MKNSFSASLLALSLCAAPLAAQAAAPQLASQIVDQYAEHIFYNSGATGMALVVIDGNQVV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCHHC NRSFGDTKPGNNLRPRPDSLIRIASITKLMTSEVMVKMAAEGRVKLNDPLRKYAPQGAYV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHCCCCCCC PAYNTRQPITLLNLATHTSALPREQPGKKPPKTPVFTWPTKAQRWQWLEHANVTVPPGVR CCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCC ASYSNLAYDLLADALSRAAGKPYTALLKEKITAPLGMVDTTLTPSAEQCSRLMVASAGPS CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCH ACRDTTAAAGSGGVYSTPRDMQRWMQQFLTSNVSGSRKSTAASEQTMYFQRNDLVSLKGM HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCHHHHEEEECCCEEEEECC DVPGEASALGLGWVYMAPNGELPGIIQKTGGGGGFITYMAMIPQKNVGVFVVVTRSELSK CCCCCCCEEEEEEEEECCCCCCCCEEEECCCCCCEEEEEEECCCCCCCEEEEEEHHHHHH FTNMSDPVNRLVSDLAANKS HCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]