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The map label for this gene is hpcR [H]

Identifier: 157368869

GI number: 157368869

Start: 690291

End: 690746

Strand: Reverse

Name: hpcR [H]

Synonym: Spro_0624

Alternate gene names: 157368869

Gene position: 690746-690291 (Counterclockwise)

Preceding gene: 157368881

Following gene: 157368863

Centisome position: 12.68

GC content: 56.36

Gene sequence:

>456_bases
ATGCATGAATCCTTGACCATTGCCCTGCTACAGGCGCGTGAAACCGCCATGGGTTTTTTCCGCCCGATCCTGAAAAGCCA
TAATCTGACCGAGCAGCAGTGGCGCATCATTCGCGTATTGGCCAACAGCCGTTCAATTGAGTTCCACGAATTGGCGGCAG
AAACCTGCATTCTGCGCCCCAGCCTGACCGGCATTTTGTCGCGCATGGAGCGCGACAAGCTGATTTTCCGCCTGAAACCG
GTTAACGATCAGCGCAAACTGTATGTATCGCTGACCCAGCAGGGCCAGGAGCTGTATGAAGTGGCGCGCCATCAGGTGGA
ACAGGGCTACGCGGAGATTGAAGCCGCCTTTTCGCAGCAGAAGATGGGCCAACTGATGACCTTGCTGGACGAACTGATCC
GGCTTGGCGACCAACTGCCCGCCAACGTGACCGCCCATCCAACAAAAAAGCCGTAG

Upstream 100 bases:

>100_bases
ACCTGGCTACTATTAAGTTATTAATAAATCCAGACTGCACCGGGCATTACCTGTGTGCGGTACCGGAATAACGAACACCT
TGATAGCTAAGGCCAAATCT

Downstream 100 bases:

>100_bases
GGGCGCGGCCTGCTGCGCCCGTATAAATCGGGACGAACCTGTTCGTCCCTTACGGATGGGCCTCGGGGAGTAATGCGCCG
CCGTCCACCACCAGCGTTTG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MHESLTIALLQARETAMGFFRPILKSHNLTEQQWRIIRVLANSRSIEFHELAAETCILRPSLTGILSRMERDKLIFRLKP
VNDQRKLYVSLTQQGQELYEVARHQVEQGYAEIEAAFSQQKMGQLMTLLDELIRLGDQLPANVTAHPTKKP

Sequences:

>Translated_151_residues
MHESLTIALLQARETAMGFFRPILKSHNLTEQQWRIIRVLANSRSIEFHELAAETCILRPSLTGILSRMERDKLIFRLKP
VNDQRKLYVSLTQQGQELYEVARHQVEQGYAEIEAAFSQQKMGQLMTLLDELIRLGDQLPANVTAHPTKKP
>Mature_151_residues
MHESLTIALLQARETAMGFFRPILKSHNLTEQQWRIIRVLANSRSIEFHELAAETCILRPSLTGILSRMERDKLIFRLKP
VNDQRKLYVSLTQQGQELYEVARHQVEQGYAEIEAAFSQQKMGQLMTLLDELIRLGDQLPANVTAHPTKKP

Specific function: Repressor for the homoprotocatechuate catabolic pathway hpc operon [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012712
- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17394; Mature: 17394

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHESLTIALLQARETAMGFFRPILKSHNLTEQQWRIIRVLANSRSIEFHELAAETCILRP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
SLTGILSRMERDKLIFRLKPVNDQRKLYVSLTQQGQELYEVARHQVEQGYAEIEAAFSQQ
HHHHHHHHHHHHCEEEEEECCCCCHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
KMGQLMTLLDELIRLGDQLPANVTAHPTKKP
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHESLTIALLQARETAMGFFRPILKSHNLTEQQWRIIRVLANSRSIEFHELAAETCILRP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
SLTGILSRMERDKLIFRLKPVNDQRKLYVSLTQQGQELYEVARHQVEQGYAEIEAAFSQQ
HHHHHHHHHHHHCEEEEEECCCCCHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
KMGQLMTLLDELIRLGDQLPANVTAHPTKKP
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8384293; 8550403 [H]