| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is argI [H]
Identifier: 157368799
GI number: 157368799
Start: 613267
End: 614286
Strand: Reverse
Name: argI [H]
Synonym: Spro_0554
Alternate gene names: 157368799
Gene position: 614286-613267 (Counterclockwise)
Preceding gene: 157368802
Following gene: 157368798
Centisome position: 11.27
GC content: 57.94
Gene sequence:
>1020_bases ATGAGTAGCATAAACCCGTTCTACAAACGTCACTTCCTGAGGTTAATGGATTTCACCCCGGCACAGCTGCATGCGCTGCT GAAACTGTCGGCCGACTTGAAGCAGGCCAAGAAGCAAGGCAAGGAAGTACGCCACCTGCAGGGCAAAAACATCGCGCTCA TCTTCGAAAAAGACTCGACCCGTACCCGATGCTCTTTCGAAGTTGCCGCATTCGATCAGGGTGCTCAGGTCACCTATCTC GGTCCGAGCGGCAGCCAGATTGGCCACAAGGAATCGATGAAAGACACCGCCCGCGTGCTGGGCCGGATGTATGACGGTAT TCAGTACCGCGGGTACGGCCAGCATCTGGTGGAAACCCTGGCCCAGCATGCCGGCGTGCCGGTGTGGAACGGGCTGACCA ATGAGTTCCACCCCACCCAATTGCTGGCAGACCTGCTCACGGTACAGGAACAGTTGCCGGGCAAGCCGCTGAGCGAGGTG AAGTTCGCCTACCTCGGCGATACCCGCAACAATATGGGCAACACCCTGCTGGAAGCCGCCGCACTGGCGGGAATGGATCT GCGTCTGGTGGCGCCAAAGGCCTGCTGGCCGCAGCCGGAACTGGTGGCAGAGTGCCAGGCATTAGCCAAACAGACCGGGG CCAAAATCACCCTGACCGAAGATATTGCCGAAGGGGTGAAGGACGCGGACTTTCTGTATACCGACGTCTGGGTGTCGATG GGTGAACCCAAAGAAACCTGGCACGAGCGTATTGGGCTGTTGAAACCCTATCAGGTCAATATGGCGATGGTGAAACTGAC CGGCAACCCGAACGTTAAATTCCTGCACTGTCTGCCGGCGTTTCACGACGACCAAACCACCCTCGGCAAGCAGATGGCAG AGCAATACGGGCTGCATGGCGGCATGGAAGTGACCGATGAAGTGTTCGAGTCCGCGCACAGCGTGGTGTTCGATCAGGCA GAAAACCGTCTGCACACCATCAAGGCGGTGATGGTCGCCACCCTGAGCGAAACGCTTTAA
Upstream 100 bases:
>100_bases CCACGATAAACGTGAAAGATTTCCATCCCGGGGTTGAAATTGAATATTCATACATATAAAGTGAATTTAAATTCAATTCA AGCAATAAGGATATACGGCA
Downstream 100 bases:
>100_bases CCATTAACTCCCACACATATTGCCGGGGCGCGTCACGCACGGGCAATGGGGAGCGCGGGTTTGCAGACTCGCGCTCCCCT CCTCTCTGGCAACCCCTGCC
Product: ornithine carbamoyltransferase
Products: NA
Alternate protein names: OTCase [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSSINPFYKRHFLRLMDFTPAQLHALLKLSADLKQAKKQGKEVRHLQGKNIALIFEKDSTRTRCSFEVAAFDQGAQVTYL GPSGSQIGHKESMKDTARVLGRMYDGIQYRGYGQHLVETLAQHAGVPVWNGLTNEFHPTQLLADLLTVQEQLPGKPLSEV KFAYLGDTRNNMGNTLLEAAALAGMDLRLVAPKACWPQPELVAECQALAKQTGAKITLTEDIAEGVKDADFLYTDVWVSM GEPKETWHERIGLLKPYQVNMAMVKLTGNPNVKFLHCLPAFHDDQTTLGKQMAEQYGLHGGMEVTDEVFESAHSVVFDQA ENRLHTIKAVMVATLSETL
Sequences:
>Translated_339_residues MSSINPFYKRHFLRLMDFTPAQLHALLKLSADLKQAKKQGKEVRHLQGKNIALIFEKDSTRTRCSFEVAAFDQGAQVTYL GPSGSQIGHKESMKDTARVLGRMYDGIQYRGYGQHLVETLAQHAGVPVWNGLTNEFHPTQLLADLLTVQEQLPGKPLSEV KFAYLGDTRNNMGNTLLEAAALAGMDLRLVAPKACWPQPELVAECQALAKQTGAKITLTEDIAEGVKDADFLYTDVWVSM GEPKETWHERIGLLKPYQVNMAMVKLTGNPNVKFLHCLPAFHDDQTTLGKQMAEQYGLHGGMEVTDEVFESAHSVVFDQA ENRLHTIKAVMVATLSETL >Mature_338_residues SSINPFYKRHFLRLMDFTPAQLHALLKLSADLKQAKKQGKEVRHLQGKNIALIFEKDSTRTRCSFEVAAFDQGAQVTYLG PSGSQIGHKESMKDTARVLGRMYDGIQYRGYGQHLVETLAQHAGVPVWNGLTNEFHPTQLLADLLTVQEQLPGKPLSEVK FAYLGDTRNNMGNTLLEAAALAGMDLRLVAPKACWPQPELVAECQALAKQTGAKITLTEDIAEGVKDADFLYTDVWVSMG EPKETWHERIGLLKPYQVNMAMVKLTGNPNVKFLHCLPAFHDDQTTLGKQMAEQYGLHGGMEVTDEVFESAHSVVFDQAE NRLHTIKAVMVATLSETL
Specific function: Arginine biosynthesis; sixth step. [C]
COG id: COG0078
COG function: function code E; Ornithine carbamoyltransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATCase/OTCase family [H]
Homologues:
Organism=Homo sapiens, GI38788445, Length=329, Percent_Identity=37.9939209726444, Blast_Score=199, Evalue=3e-51, Organism=Homo sapiens, GI18105007, Length=330, Percent_Identity=26.3636363636364, Blast_Score=83, Evalue=3e-16, Organism=Escherichia coli, GI1790703, Length=334, Percent_Identity=77.2455089820359, Blast_Score=559, Evalue=1e-161, Organism=Escherichia coli, GI1786469, Length=334, Percent_Identity=77.8443113772455, Blast_Score=558, Evalue=1e-160, Organism=Escherichia coli, GI2367364, Length=342, Percent_Identity=28.3625730994152, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI48994908, Length=373, Percent_Identity=23.8605898123324, Blast_Score=74, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6322373, Length=333, Percent_Identity=32.7327327327327, Blast_Score=166, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6322331, Length=170, Percent_Identity=29.4117647058824, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI24642586, Length=227, Percent_Identity=27.3127753303965, Blast_Score=71, Evalue=9e-13,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2066 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006132 - InterPro: IPR006130 - InterPro: IPR006131 - InterPro: IPR002292 [H]
Pfam domain/function: PF00185 OTCace; PF02729 OTCace_N [H]
EC number: =2.1.3.3 [H]
Molecular weight: Translated: 37695; Mature: 37563
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: PS00097 CARBAMOYLTRANSFERASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSINPFYKRHFLRLMDFTPAQLHALLKLSADLKQAKKQGKEVRHLQGKNIALIFEKDST CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC RTRCSFEVAAFDQGAQVTYLGPSGSQIGHKESMKDTARVLGRMYDGIQYRGYGQHLVETL CCEEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH AQHAGVPVWNGLTNEFHPTQLLADLLTVQEQLPGKPLSEVKFAYLGDTRNNMGNTLLEAA HHHCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHEEEECCCCCHHHHHHHHHH ALAGMDLRLVAPKACWPQPELVAECQALAKQTGAKITLTEDIAEGVKDADFLYTDVWVSM HHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHCCCCHHHHHHHHHHHCC GEPKETWHERIGLLKPYQVNMAMVKLTGNPNVKFLHCLPAFHDDQTTLGKQMAEQYGLHG CCCHHHHHHHHCCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCC GMEVTDEVFESAHSVVFDQAENRLHTIKAVMVATLSETL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSINPFYKRHFLRLMDFTPAQLHALLKLSADLKQAKKQGKEVRHLQGKNIALIFEKDST CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC RTRCSFEVAAFDQGAQVTYLGPSGSQIGHKESMKDTARVLGRMYDGIQYRGYGQHLVETL CCEEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH AQHAGVPVWNGLTNEFHPTQLLADLLTVQEQLPGKPLSEVKFAYLGDTRNNMGNTLLEAA HHHCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHEEEECCCCCHHHHHHHHHH ALAGMDLRLVAPKACWPQPELVAECQALAKQTGAKITLTEDIAEGVKDADFLYTDVWVSM HHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHCCCCHHHHHHHHHHHCC GEPKETWHERIGLLKPYQVNMAMVKLTGNPNVKFLHCLPAFHDDQTTLGKQMAEQYGLHG CCCHHHHHHHHCCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCC GMEVTDEVFESAHSVVFDQAENRLHTIKAVMVATLSETL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA