Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is yigZ [H]
Identifier: 157368513
GI number: 157368513
Start: 295466
End: 296080
Strand: Direct
Name: yigZ [H]
Synonym: Spro_0264
Alternate gene names: 157368513
Gene position: 295466-296080 (Clockwise)
Preceding gene: 157368512
Following gene: 157368514
Centisome position: 5.42
GC content: 52.85
Gene sequence:
>615_bases ATGCAGCCTTACCCGATCCCGGCAGGCCCCGTCAGTGTCAGCGAAGAAATAAAGAAGAGCCGTTTCATCACCCTGCTGGC ACCGACCAGTGGGGTTGATGTTGCAAAGGCATTTATTCAGCAGGTTCGTGATGAACACCCTGCGGCCAGGCACCATTGCT GGGCATTTGTCGCAGGATCACCGACTGACTCACAACAGTTGGGCTTTTCCGACGACGGCGAACCTTCCGGCACGGCTGGT AAACCCATTCTGGCACAACTGATGGGCAGTGGAATCGGCGAAATCACCGCCGTGGTAGTGCGTTACTACGGCGGTATCAA GTTGGGCACCGGTGGTTTGGTGAGAGCCTACGGCAGTGGCGTGCAGCAGGCATTAAAGCAATTGGCCGTGAGCTACAAAA TCCCGCAGGCCGAATATACTTTGCAATGTGACTATGCTCAGTTGGCATTGGTAGAGAATTTATTGCAGCAAACTGAAGGG CGGATAGTGCAGGGGGAATATGGTGCTTCCGTCATGCTGCATTTGGCTTTACCGGTCACCGGCGTTGAAGCGTTTGGGAA TAAATTACGTGATCTTAGTCGCGGTAATTTGCAATTAACCCCCATTTCGCAATAA
Upstream 100 bases:
>100_bases TCGATGCGCTGAAACCTTATGGTGGTATCCGTATTGAAGACAATATCGTGATCCACGAAAAGCGTATCGAGAACATGACG CGCGATCTGAACCTGGCCTG
Downstream 100 bases:
>100_bases TTCCCCCAACTGAATTGCTAAGGATCGTGCTGAAATGCATTTTCGCGCTATAACCCGTATCGTTGGTTTGCTGGTCATCC TGTTCTCCGGGACGATGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MQPYPIPAGPVSVSEEIKKSRFITLLAPTSGVDVAKAFIQQVRDEHPAARHHCWAFVAGSPTDSQQLGFSDDGEPSGTAG KPILAQLMGSGIGEITAVVVRYYGGIKLGTGGLVRAYGSGVQQALKQLAVSYKIPQAEYTLQCDYAQLALVENLLQQTEG RIVQGEYGASVMLHLALPVTGVEAFGNKLRDLSRGNLQLTPISQ
Sequences:
>Translated_204_residues MQPYPIPAGPVSVSEEIKKSRFITLLAPTSGVDVAKAFIQQVRDEHPAARHHCWAFVAGSPTDSQQLGFSDDGEPSGTAG KPILAQLMGSGIGEITAVVVRYYGGIKLGTGGLVRAYGSGVQQALKQLAVSYKIPQAEYTLQCDYAQLALVENLLQQTEG RIVQGEYGASVMLHLALPVTGVEAFGNKLRDLSRGNLQLTPISQ >Mature_204_residues MQPYPIPAGPVSVSEEIKKSRFITLLAPTSGVDVAKAFIQQVRDEHPAARHHCWAFVAGSPTDSQQLGFSDDGEPSGTAG KPILAQLMGSGIGEITAVVVRYYGGIKLGTGGLVRAYGSGVQQALKQLAVSYKIPQAEYTLQCDYAQLALVENLLQQTEG RIVQGEYGASVMLHLALPVTGVEAFGNKLRDLSRGNLQLTPISQ
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
Organism=Escherichia coli, GI87082338, Length=204, Percent_Identity=66.1764705882353, Blast_Score=257, Evalue=3e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR000640 - InterPro: IPR015796 - InterPro: IPR015269 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 21722; Mature: 21722
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS00910 UPF0029
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPYPIPAGPVSVSEEIKKSRFITLLAPTSGVDVAKAFIQQVRDEHPAARHHCWAFVAGS CCCCCCCCCCCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHEEEEEECC PTDSQQLGFSDDGEPSGTAGKPILAQLMGSGIGEITAVVVRYYGGIKLGTGGLVRAYGSG CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCEEECCCCHHHHHHHH VQQALKQLAVSYKIPQAEYTLQCDYAQLALVENLLQQTEGRIVQGEYGASVMLHLALPVT HHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCH GVEAFGNKLRDLSRGNLQLTPISQ HHHHHHHHHHHHCCCCEEEEECCC >Mature Secondary Structure MQPYPIPAGPVSVSEEIKKSRFITLLAPTSGVDVAKAFIQQVRDEHPAARHHCWAFVAGS CCCCCCCCCCCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHEEEEEECC PTDSQQLGFSDDGEPSGTAGKPILAQLMGSGIGEITAVVVRYYGGIKLGTGGLVRAYGSG CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCEEECCCCHHHHHHHH VQQALKQLAVSYKIPQAEYTLQCDYAQLALVENLLQQTEGRIVQGEYGASVMLHLALPVT HHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCH GVEAFGNKLRDLSRGNLQLTPISQ HHHHHHHHHHHHCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2243799; 1379743; 9278503; 8313894 [H]