Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is yhjU [H]
Identifier: 157163010
GI number: 157163010
Start: 3727832
End: 3728398
Strand: Direct
Name: yhjU [H]
Synonym: EcHS_A3733
Alternate gene names: 157163010
Gene position: 3727832-3728398 (Clockwise)
Preceding gene: 157163005
Following gene: 157163013
Centisome position: 80.28
GC content: 54.32
Gene sequence:
>567_bases GTGGTACCGATATCCCAGCTCCAGACGTCATTTCGCCAGCCGACCGCCACGTTCTACAACACGCTTCCACTGCATGACGG CAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAGAAATTCTTTGATGAACTGGACGCCTTCT TTACTGAACTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGA ATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATTCTTCGGCATGAA GGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTC TCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGAAAAAACTCACCAGTGGGTTGCCACAAACAGCACCGGTCTCC GAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCC GCAGTAA
Upstream 100 bases:
>100_bases GATGGGCCGACGGTGGGCGTTAACGGTGTAACCCAGCGGCCCGATATCATCGCTGTAACTGATGCCGCCGACCACATCCA CCACGTTGAAGCCCATCGGC
Downstream 100 bases:
>100_bases GAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCAT GACACGTTACTTCCGCTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MVPISQLQTSFRQPTATFYNTLPLHDGNHYPGVSKTADYKARAQKFFDELDAFFTELEKSGRKVMVVVVPEHGGALKGDR MQVSGLRDIPSPSITDVPVGVKFFGMKAPHQGAPIVIEQPSSFLAISDLVVRVLDGKIFTEDNVDWKKLTSGLPQTAPVS ENSNAVVIQYQDKPYVRLNGGDWVPYPQ
Sequences:
>Translated_188_residues MVPISQLQTSFRQPTATFYNTLPLHDGNHYPGVSKTADYKARAQKFFDELDAFFTELEKSGRKVMVVVVPEHGGALKGDR MQVSGLRDIPSPSITDVPVGVKFFGMKAPHQGAPIVIEQPSSFLAISDLVVRVLDGKIFTEDNVDWKKLTSGLPQTAPVS ENSNAVVIQYQDKPYVRLNGGDWVPYPQ >Mature_188_residues MVPISQLQTSFRQPTATFYNTLPLHDGNHYPGVSKTADYKARAQKFFDELDAFFTELEKSGRKVMVVVVPEHGGALKGDR MQVSGLRDIPSPSITDVPVGVKFFGMKAPHQGAPIVIEQPSSFLAISDLVVRVLDGKIFTEDNVDWKKLTSGLPQTAPVS ENSNAVVIQYQDKPYVRLNGGDWVPYPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789960, Length=174, Percent_Identity=99.4252873563218, Blast_Score=360, Evalue=1e-101,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017744 [H]
Pfam domain/function: PF11658 DUF3260 [H]
EC number: NA
Molecular weight: Translated: 20776; Mature: 20776
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPISQLQTSFRQPTATFYNTLPLHDGNHYPGVSKTADYKARAQKFFDELDAFFTELEKS CCCHHHHHHHHCCCCHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GRKVMVVVVPEHGGALKGDRMQVSGLRDIPSPSITDVPVGVKFFGMKAPHQGAPIVIEQP CCEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECC SSFLAISDLVVRVLDGKIFTEDNVDWKKLTSGLPQTAPVSENSNAVVIQYQDKPYVRLNG CCCHHHHHHHHHHHCCEEEECCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEECC GDWVPYPQ CCCCCCCC >Mature Secondary Structure MVPISQLQTSFRQPTATFYNTLPLHDGNHYPGVSKTADYKARAQKFFDELDAFFTELEKS CCCHHHHHHHHCCCCHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GRKVMVVVVPEHGGALKGDRMQVSGLRDIPSPSITDVPVGVKFFGMKAPHQGAPIVIEQP CCEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECC SSFLAISDLVVRVLDGKIFTEDNVDWKKLTSGLPQTAPVSENSNAVVIQYQDKPYVRLNG CCCHHHHHHHHHHHCCEEEECCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEECC GDWVPYPQ CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]