| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
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The map label for this gene is smg [H]
Identifier: 157162758
GI number: 157162758
Start: 3476334
End: 3476807
Strand: Reverse
Name: smg [H]
Synonym: EcHS_A3478
Alternate gene names: 157162758
Gene position: 3476807-3476334 (Counterclockwise)
Preceding gene: 157162759
Following gene: 157162757
Centisome position: 74.87
GC content: 45.78
Gene sequence:
>474_bases ATGTTCGACGTACTAATGTATTTGTTTGAAACCTATATTCACACAGAAGCTGAGTTGCGTGTGGATCAAGACAAACTTGA ACAGGATCTTACCGACGCAGGTTTTGAGCGAGAAGATATCTACAATGCCCTGCTATGGCTGGAAAAACTTGCTGATTATC AGGAAGGGTTGGCAGAACCGATGCAACTGGCCTCGGATCCTCTCTCCATGCGTATTTATACACCGGAAGAGTGTGAACGA CTGGATGCCAGCTGCCGTGGGTTTCTGCTTTTCCTTGAGCAGATTCAGGTGCTCAACCTTGAAACTCGTGAAATGGTGAT AGAGCGAGTGCTCGCGCTGGATAACGCAGAGTTCGAACTGGATGATCTGAAATGGGTGATCCTGATGGTGTTGTTCAATA TTCCGGGCTGCGAAAATGCGTACCAGCAAATGGAAGAATTACTCTTTGAAGTGAATGAAGGTATGTTGCATTAA
Upstream 100 bases:
>100_bases CAACCTGTGCCAGAGGTAGTTACTCAACTACTCGAACTGGAGTTAGCAGGATGGATCGCAGCTGTACCCGGCGGCTATGT CCGATTGAGGAGGGCATGCC
Downstream 100 bases:
>100_bases TCATTTCTTTAATTCAGCATAAGTTGTTATGGCGAAATCAGCACTGTTCACGGTGCGTAATAATGAGTCCTGCCCAAAGT GCGGGGCTGAACTGGTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFEREDIYNALLWLEKLADYQEGLAEPMQLASDPLSMRIYTPEECER LDASCRGFLLFLEQIQVLNLETREMVIERVLALDNAEFELDDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH
Sequences:
>Translated_157_residues MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFEREDIYNALLWLEKLADYQEGLAEPMQLASDPLSMRIYTPEECER LDASCRGFLLFLEQIQVLNLETREMVIERVLALDNAEFELDDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH >Mature_157_residues MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFEREDIYNALLWLEKLADYQEGLAEPMQLASDPLSMRIYTPEECER LDASCRGFLLFLEQIQVLNLETREMVIERVLALDNAEFELDDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH
Specific function: Unknown
COG id: COG2922
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the smg family [H]
Homologues:
Organism=Escherichia coli, GI1789679, Length=157, Percent_Identity=100, Blast_Score=316, Evalue=4e-88,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007456 [H]
Pfam domain/function: PF04361 DUF494 [H]
EC number: NA
Molecular weight: Translated: 18510; Mature: 18510
Theoretical pI: Translated: 3.77; Mature: 3.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFEREDIYNALLWLEKLADYQEGLAEP CHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH MQLASDPLSMRIYTPEECERLDASCRGFLLFLEQIQVLNLETREMVIERVLALDNAEFEL HHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCH DDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFEREDIYNALLWLEKLADYQEGLAEP CHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH MQLASDPLSMRIYTPEECERLDASCRGFLLFLEQIQVLNLETREMVIERVLALDNAEFEL HHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCH DDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA