Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is paaK [H]
Identifier: 157160874
GI number: 157160874
Start: 1479623
End: 1480693
Strand: Direct
Name: paaK [H]
Synonym: EcHS_A1479
Alternate gene names: 157160874
Gene position: 1479623-1480693 (Clockwise)
Preceding gene: 157160873
Following gene: 157160875
Centisome position: 31.86
GC content: 53.41
Gene sequence:
>1071_bases ATGACAACGTTTCATTCCTTAACGGTGGCAAAAGTGGAGCCGGAAACCCGTGATGCGGTGACCATTACCTTTGCGGTGCC CCAGCCTTTGCAGGAGGCGTATCGCTTTCGCCCCGGTCAACATTTGACCTTAAAAGCCAGCTTTGATGGTGAAGAATTAC GCCGTTGTTACTCCATTTGCCGCAGCTATCTGCCTGGCGAAATTAGTGTGGCGGTGAAAGCCATTGAAGGCGGACGTTTC TCCCGCTATGCCCGCGAACACATCCGCCAGGGTATGACGCTGGAGGTCATGGTGCCGCAGGGGCATTTCGGCTATCAGCC GCAGGCCGAACGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCA CTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCATGATGTTTCGCCAGGCA CTGGCAGACCTGAAAGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCT GCTTAACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGCCTCGCTCATTAATTTTCGTCTTTATGATGAGGCAT TTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATAAAACCATTCAT CTGGAGCGGTTTAATACGCCTGGCACGCGCGTCAAACGTAGCGTTAACGTGCAAAGTGACGGACAAAAAGTGACTGTACG TCAGGATGGGCGGGATCGGGAAATCGTGCTTAATGCCGACGATGAAAGCATTCTCGATGCGGCATTGCGCCAGGGGGCGG ATCTGCCCTATGCCTGCAAAGGCGGCGTCTGTGCGACCTGCAAATGCAAAGTGCTGCGTGGCAAAGTGGCGATGGAAACC AATTACAGTCTGGAACCGGATGAACTGGCCGCAGGTTATGTGTTGAGTTGCCAGGCACTGCCGCTGACCAGCGATGTGGT GGTTGACTTTGACGCGAAGGGGATGGCATGA
Upstream 100 bases:
>100_bases ACACTTATCAGTGAATTTGGTTCCACGGCCTGCAAAGCATTGTATCGCTGCGATAGTTGCCGCGAACCTTTCGATTATTT CAAATGTATTTGAGGATGCC
Downstream 100 bases:
>100_bases GCGAACTGATCGTCAGCCGTCAGCAACGAGTATTGTTGCTGACCCTTAACCGTCCCGCCGCACGTAATGCGCTAAATAAT GCCCTGCTGATGCAACTGGT
Product: phenylacetate-CoA oxygenase/reductase, PaaK subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MTTFHSLTVAKVEPETRDAVTITFAVPQPLQEAYRFRPGQHLTLKASFDGEELRRCYSICRSYLPGEISVAVKAIEGGRF SRYAREHIRQGMTLEVMVPQGHFGYQPQAERQGRYLAIAAGSGITPMLAIIATTLQTEPESQFTLIYGNRTSQSMMFRQA LADLKDKYPQRLQLLCIFSQETLDSDLLNGRIDGEKLQSLGASLINFRLYDEAFICGPAAMMDDAETALKALGMPDKTIH LERFNTPGTRVKRSVNVQSDGQKVTVRQDGRDREIVLNADDESILDAALRQGADLPYACKGGVCATCKCKVLRGKVAMET NYSLEPDELAAGYVLSCQALPLTSDVVVDFDAKGMA
Sequences:
>Translated_356_residues MTTFHSLTVAKVEPETRDAVTITFAVPQPLQEAYRFRPGQHLTLKASFDGEELRRCYSICRSYLPGEISVAVKAIEGGRF SRYAREHIRQGMTLEVMVPQGHFGYQPQAERQGRYLAIAAGSGITPMLAIIATTLQTEPESQFTLIYGNRTSQSMMFRQA LADLKDKYPQRLQLLCIFSQETLDSDLLNGRIDGEKLQSLGASLINFRLYDEAFICGPAAMMDDAETALKALGMPDKTIH LERFNTPGTRVKRSVNVQSDGQKVTVRQDGRDREIVLNADDESILDAALRQGADLPYACKGGVCATCKCKVLRGKVAMET NYSLEPDELAAGYVLSCQALPLTSDVVVDFDAKGMA >Mature_355_residues TTFHSLTVAKVEPETRDAVTITFAVPQPLQEAYRFRPGQHLTLKASFDGEELRRCYSICRSYLPGEISVAVKAIEGGRFS RYAREHIRQGMTLEVMVPQGHFGYQPQAERQGRYLAIAAGSGITPMLAIIATTLQTEPESQFTLIYGNRTSQSMMFRQAL ADLKDKYPQRLQLLCIFSQETLDSDLLNGRIDGEKLQSLGASLINFRLYDEAFICGPAAMMDDAETALKALGMPDKTIHL ERFNTPGTRVKRSVNVQSDGQKVTVRQDGRDREIVLNADDESILDAALRQGADLPYACKGGVCATCKCKVLRGKVAMETN YSLEPDELAAGYVLSCQALPLTSDVVVDFDAKGMA
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1787658, Length=356, Percent_Identity=99.438202247191, Blast_Score=731, Evalue=0.0, Organism=Escherichia coli, GI1787098, Length=338, Percent_Identity=28.1065088757396, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1788104, Length=351, Percent_Identity=23.0769230769231, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1788903, Length=216, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17563926, Length=212, Percent_Identity=26.8867924528302, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323510, Length=201, Percent_Identity=27.8606965174129, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR001709 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR011884 - InterPro: IPR001221 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 39307; Mature: 39176
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFHSLTVAKVEPETRDAVTITFAVPQPLQEAYRFRPGQHLTLKASFDGEELRRCYSIC CCCEEEEEEEEECCCCCCEEEEEEECCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH RSYLPGEISVAVKAIEGGRFSRYAREHIRQGMTLEVMVPQGHFGYQPQAERQGRYLAIAA HHHCCCCEEEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHCCCEEEEEE GSGITPMLAIIATTLQTEPESQFTLIYGNRTSQSMMFRQALADLKDKYPQRLQLLCIFSQ CCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECH ETLDSDLLNGRIDGEKLQSLGASLINFRLYDEAFICGPAAMMDDAETALKALGMPDKTIH HHHCHHHHCCCCCHHHHHHHHHHHHEEEEECCEEEECCHHHHCCHHHHHHHCCCCCCEEE LERFNTPGTRVKRSVNVQSDGQKVTVRQDGRDREIVLNADDESILDAALRQGADLPYACK EEECCCCCHHHEEEECCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHCCCCCCEECC GGVCATCKCKVLRGKVAMETNYSLEPDELAAGYVLSCQALPLTSDVVVDFDAKGMA CCEEEEEEEEEEECEEEEECCCCCCHHHHCCCEEEEEEECCCCCCEEEEECCCCCC >Mature Secondary Structure TTFHSLTVAKVEPETRDAVTITFAVPQPLQEAYRFRPGQHLTLKASFDGEELRRCYSIC CCEEEEEEEEECCCCCCEEEEEEECCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH RSYLPGEISVAVKAIEGGRFSRYAREHIRQGMTLEVMVPQGHFGYQPQAERQGRYLAIAA HHHCCCCEEEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHCCCEEEEEE GSGITPMLAIIATTLQTEPESQFTLIYGNRTSQSMMFRQALADLKDKYPQRLQLLCIFSQ CCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECH ETLDSDLLNGRIDGEKLQSLGASLINFRLYDEAFICGPAAMMDDAETALKALGMPDKTIH HHHCHHHHCCCCCHHHHHHHHHHHHEEEEECCEEEECCHHHHCCHHHHHHHCCCCCCEEE LERFNTPGTRVKRSVNVQSDGQKVTVRQDGRDREIVLNADDESILDAALRQGADLPYACK EEECCCCCHHHEEEECCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHCCCCCCEECC GGVCATCKCKVLRGKVAMETNYSLEPDELAAGYVLSCQALPLTSDVVVDFDAKGMA CCEEEEEEEEEEECEEEEECCCCCCHHHHCCCEEEEEEECCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD [C]
Metal ions: Iron-Sulfur [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]