Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is paaJ [H]
Identifier: 157160873
GI number: 157160873
Start: 1479118
End: 1479615
Strand: Direct
Name: paaJ [H]
Synonym: EcHS_A1478
Alternate gene names: 157160873
Gene position: 1479118-1479615 (Clockwise)
Preceding gene: 157160872
Following gene: 157160874
Centisome position: 31.85
GC content: 56.22
Gene sequence:
>498_bases ATGCAACGTCTGGCCACCATTGCACCGCCGCAGGTGCATGAGATATGGGCGCTACTCAGCCAGATCCCGGACCCGGAGAT CCCGGTGCTGACCATTACCGATTTAGGCATGGTGCGTAATGTGACACAGATGGGAGAAGGATGGGTGATCGGCTTTACGC CGACTTATTCCGGTTGTCCGGCAACGGAACATTTGATTGGCGCGATACGTGAGGCAATGACAACCCACGGGTTTACCCCC GTTCAGGTTGTGCTGCAACTCGACCCGGCATGGACCACCGACTGGATGACCCCCGATGCCCGTGAGCGTCTGCGACAGTA TGGCATTAGCCCGCCCGCCGGACACAGTTGCCATGCCCATTTGCCGCCAGAAGTACGTTGCCCGCGCTGTGCCAGCGTCC ATACCACACTTATCAGTGAATTTGGTTCCACGGCCTGCAAAGCATTGTATCGCTGCGATAGTTGCCGCGAACCTTTCGAT TATTTCAAATGTATTTGA
Upstream 100 bases:
>100_bases AAAAAGGACTGCATACCGAACACCTTGGGCCCATGCTGGCAGAAATGCAGTATCTCCAGCGTGTCTTGCCCGGTCAGCAG TGGTAACAGAGGAGATGGGT
Downstream 100 bases:
>100_bases GGATGCCATGACAACGTTTCATTCCTTAACGGTGGCAAAAGTGGAGCCGGAAACCCGTGATGCGGTGACCATTACCTTTG CGGTGCCCCAGCCTTTGCAG
Product: phenylacetate-CoA oxygenase, PaaJ subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MQRLATIAPPQVHEIWALLSQIPDPEIPVLTITDLGMVRNVTQMGEGWVIGFTPTYSGCPATEHLIGAIREAMTTHGFTP VQVVLQLDPAWTTDWMTPDARERLRQYGISPPAGHSCHAHLPPEVRCPRCASVHTTLISEFGSTACKALYRCDSCREPFD YFKCI
Sequences:
>Translated_165_residues MQRLATIAPPQVHEIWALLSQIPDPEIPVLTITDLGMVRNVTQMGEGWVIGFTPTYSGCPATEHLIGAIREAMTTHGFTP VQVVLQLDPAWTTDWMTPDARERLRQYGISPPAGHSCHAHLPPEVRCPRCASVHTTLISEFGSTACKALYRCDSCREPFD YFKCI >Mature_165_residues MQRLATIAPPQVHEIWALLSQIPDPEIPVLTITDLGMVRNVTQMGEGWVIGFTPTYSGCPATEHLIGAIREAMTTHGFTP VQVVLQLDPAWTTDWMTPDARERLRQYGISPPAGHSCHAHLPPEVRCPRCASVHTTLISEFGSTACKALYRCDSCREPFD YFKCI
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510939, Length=165, Percent_Identity=98.7878787878788, Blast_Score=340, Evalue=4e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002744 - InterPro: IPR011883 [H]
Pfam domain/function: PF01883 DUF59 [H]
EC number: NA
Molecular weight: Translated: 18346; Mature: 18346
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRLATIAPPQVHEIWALLSQIPDPEIPVLTITDLGMVRNVTQMGEGWVIGFTPTYSGCP CCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCEEEEECCCCCCCC ATEHLIGAIREAMTTHGFTPVQVVLQLDPAWTTDWMTPDARERLRQYGISPPAGHSCHAH HHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC LPPEVRCPRCASVHTTLISEFGSTACKALYRCDSCREPFDYFKCI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC >Mature Secondary Structure MQRLATIAPPQVHEIWALLSQIPDPEIPVLTITDLGMVRNVTQMGEGWVIGFTPTYSGCP CCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCEEEEECCCCCCCC ATEHLIGAIREAMTTHGFTPVQVVLQLDPAWTTDWMTPDARERLRQYGISPPAGHSCHAH HHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC LPPEVRCPRCASVHTTLISEFGSTACKALYRCDSCREPFDYFKCI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]