Click here to switch to the map view.

The map label for this gene is 156937930

Identifier: 156937930

GI number: 156937930

Start: 1019785

End: 1020357

Strand: Direct

Name: 156937930

Synonym: Igni_1142

Alternate gene names: NA

Gene position: 1019785-1020357 (Clockwise)

Preceding gene: 156937923

Following gene: 156937932

Centisome position: 78.59

GC content: 58.29

Gene sequence:

>573_bases
TTGAGGGCCCACGTCCCCTTGGGCTTCGACGCCACGCAGCCGATAACGTGCGTTTCTTCCCATTTAGGAGAAGTGACGGA
AGTGGTAATTTACGTCCCGAAGGAGAGGTCGCCGAAGGCGGAGGAGGCCTTAAACGCTTTCCTCGCCTTCTTGAAGGGAG
CAGGAAAGAGGTCCGAGGTAGTTTACTTAAACCCTTGCGACGGCGAGACGCTATTCCAAATGGTAATGAATATGGGAGAT
GATAACTTGATCTGTGGGGGCTCGGGGCTGAGGGTCCTCGGGCTCCAGCTCCTCTTGGCTTGTGTCTTGAGCCGCTCCCG
GTGTAAGCTGTGGGCGGGCCACGAGGGAGGGGGACCTTGTCTGGACTTGAGGGTCCCCGACCCCTTCGAGAGCAAGCTGG
AGGCCCGGGCCTACGCGGCGTTGGCCTTGAAGGGCGAGGCGAGTTTGGACGAGCTGAGCAAGGAACTCGGAGTTAACAAG
AAGACCTTGTGGAGCGCCCTTGAGAGGTTGGAGAAAAACGGGTTGGTGGAAAAGCCTAAGAGGGGAATCTACCGGGCGAA
GCCCCTCAGTTGA

Upstream 100 bases:

>100_bases
GCTAAATCTCTACATTGTATTTTGCCAGTAAACCCCGAGGCGACAGGCCGAGGGAGGGGGCCATAGGGAGTTGACCGGAG
GAGTCAAGGGGGGCTAAAGT

Downstream 100 bases:

>100_bases
GCTCCGCCAGGTGGGCGTAGTACAAGGCCGTGTAGGCCAAGAACTCCGCCGCCACGGGGTCGGTCCTCAGCAAGCTGCCC
ACGTACTGGGAGTAGTTGTA

Product: transcriptional regulator, TrmB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MRAHVPLGFDATQPITCVSSHLGEVTEVVIYVPKERSPKAEEALNAFLAFLKGAGKRSEVVYLNPCDGETLFQMVMNMGD
DNLICGGSGLRVLGLQLLLACVLSRSRCKLWAGHEGGGPCLDLRVPDPFESKLEARAYAALALKGEASLDELSKELGVNK
KTLWSALERLEKNGLVEKPKRGIYRAKPLS

Sequences:

>Translated_190_residues
MRAHVPLGFDATQPITCVSSHLGEVTEVVIYVPKERSPKAEEALNAFLAFLKGAGKRSEVVYLNPCDGETLFQMVMNMGD
DNLICGGSGLRVLGLQLLLACVLSRSRCKLWAGHEGGGPCLDLRVPDPFESKLEARAYAALALKGEASLDELSKELGVNK
KTLWSALERLEKNGLVEKPKRGIYRAKPLS
>Mature_190_residues
MRAHVPLGFDATQPITCVSSHLGEVTEVVIYVPKERSPKAEEALNAFLAFLKGAGKRSEVVYLNPCDGETLFQMVMNMGD
DNLICGGSGLRVLGLQLLLACVLSRSRCKLWAGHEGGGPCLDLRVPDPFESKLEARAYAALALKGEASLDELSKELGVNK
KTLWSALERLEKNGLVEKPKRGIYRAKPLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20666; Mature: 20666

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAHVPLGFDATQPITCVSSHLGEVTEVVIYVPKERSPKAEEALNAFLAFLKGAGKRSEV
CCCCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCE
VYLNPCDGETLFQMVMNMGDDNLICGGSGLRVLGLQLLLACVLSRSRCKLWAGHEGGGPC
EEEECCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCE
LDLRVPDPFESKLEARAYAALALKGEASLDELSKELGVNKKTLWSALERLEKNGLVEKPK
EEEECCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
RGIYRAKPLS
CCCCCCCCCC
>Mature Secondary Structure
MRAHVPLGFDATQPITCVSSHLGEVTEVVIYVPKERSPKAEEALNAFLAFLKGAGKRSEV
CCCCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCE
VYLNPCDGETLFQMVMNMGDDNLICGGSGLRVLGLQLLLACVLSRSRCKLWAGHEGGGPC
EEEECCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCE
LDLRVPDPFESKLEARAYAALALKGEASLDELSKELGVNKKTLWSALERLEKNGLVEKPK
EEEECCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
RGIYRAKPLS
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA