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The map label for this gene is 156937923

Identifier: 156937923

GI number: 156937923

Start: 1013417

End: 1013923

Strand: Direct

Name: 156937923

Synonym: Igni_1135

Alternate gene names: NA

Gene position: 1013417-1013923 (Clockwise)

Preceding gene: 156937922

Following gene: 156937930

Centisome position: 78.1

GC content: 61.74

Gene sequence:

>507_bases
TTGGTTAACGCTTACGCGCTCTGCCCGGCCTTCGCCTACTTCAAGTACCACTTCCCCGAGCCCCAGACCCCTTCCATGGA
GCTGGGGAAGGAATTGGACGTGAGGGAGTTGGTTGAGAAGTTCGTGAGGCCGAAGTGCGAGGTGAGGTACCAAGTCCCGC
TGAGGGGGAAGCTGGGCTCCGGAAGGGCCGACGCGGTGGTGCTCTGCGAGGGGCGACTGGAGGTGGTGGAGGCGAAGCTG
GGCGGGGGGTTTAAGAGGCAACAGCTCGCCCAAGCGGCGTTCTACTGCTTGTTGGCGGAGGAGCAGTTCGGCCTCCCCTG
CGAGGCCCTCTGGCTCTGCTCGCCCGAGGGGTGCGAGAGGAGGCCCTTCAGCTACTCCTTGAGGGAACACGTGAAGGGCT
TGTTAGAAGCCTTGGAAAGGGACTTGGACGTCTTGCCTAGGGGTAGGCCTTCGAGGTACTGCAGCTACTGCAAGTACTCA
AGCCTGTGTCCTTGGAGACCTCCTTAA

Upstream 100 bases:

>100_bases
TTCAACGCAACAGTAAAGTACTTGGACGACGGAGATAAATTATTCATCATAGTTGTGAGCGACAAGGAGTTCAGGGAGGC
GTGGGCCGTTGAAGGGAAGG

Downstream 100 bases:

>100_bases
CTATCCCATAGACCTTAGGTAGCTCGCGCTCGATTTCCTTCTCCACGTCCTCCAAGGTCTTCCCCCTCTCCTCCAAGGCC
CTCCTCACGTAGCCGCTGGG

Product: CRISPR-associated Cas4 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MVNAYALCPAFAYFKYHFPEPQTPSMELGKELDVRELVEKFVRPKCEVRYQVPLRGKLGSGRADAVVLCEGRLEVVEAKL
GGGFKRQQLAQAAFYCLLAEEQFGLPCEALWLCSPEGCERRPFSYSLREHVKGLLEALERDLDVLPRGRPSRYCSYCKYS
SLCPWRPP

Sequences:

>Translated_168_residues
MVNAYALCPAFAYFKYHFPEPQTPSMELGKELDVRELVEKFVRPKCEVRYQVPLRGKLGSGRADAVVLCEGRLEVVEAKL
GGGFKRQQLAQAAFYCLLAEEQFGLPCEALWLCSPEGCERRPFSYSLREHVKGLLEALERDLDVLPRGRPSRYCSYCKYS
SLCPWRPP
>Mature_168_residues
MVNAYALCPAFAYFKYHFPEPQTPSMELGKELDVRELVEKFVRPKCEVRYQVPLRGKLGSGRADAVVLCEGRLEVVEAKL
GGGFKRQQLAQAAFYCLLAEEQFGLPCEALWLCSPEGCERRPFSYSLREHVKGLLEALERDLDVLPRGRPSRYCSYCKYS
SLCPWRPP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19171; Mature: 19171

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNAYALCPAFAYFKYHFPEPQTPSMELGKELDVRELVEKFVRPKCEVRYQVPLRGKLGS
CCCCHHHHHHHHHHHEECCCCCCCCHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCC
GRADAVVLCEGRLEVVEAKLGGGFKRQQLAQAAFYCLLAEEQFGLPCEALWLCSPEGCER
CCCCEEEEECCCCEEEHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC
RPFSYSLREHVKGLLEALERDLDVLPRGRPSRYCSYCKYSSLCPWRPP
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MVNAYALCPAFAYFKYHFPEPQTPSMELGKELDVRELVEKFVRPKCEVRYQVPLRGKLGS
CCCCHHHHHHHHHHHEECCCCCCCCHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCC
GRADAVVLCEGRLEVVEAKLGGGFKRQQLAQAAFYCLLAEEQFGLPCEALWLCSPEGCER
CCCCEEEEECCCCEEEHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC
RPFSYSLREHVKGLLEALERDLDVLPRGRPSRYCSYCKYSSLCPWRPP
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA