| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
Click here to switch to the map view.
The map label for this gene is sfsA [H]
Identifier: 156937148
GI number: 156937148
Start: 310555
End: 311283
Strand: Reverse
Name: sfsA [H]
Synonym: Igni_0354
Alternate gene names: 156937148
Gene position: 311283-310555 (Counterclockwise)
Preceding gene: 156937149
Following gene: 156937147
Centisome position: 23.99
GC content: 62.83
Gene sequence:
>729_bases TTGATCGTCCCGGAGAGGCCCTTGCTCAAGCTCGAGGCCTTCCACTGCACCGTAAAGGAAAAGGTAAACAGGTTTGTGGT GAGGGCCTCCGTGGGGGAGGAGGAGCTCTTAGTACACAACACCAACACCGGCCGCTTGGAGGACTTGATCTGGGAGGGCA ACGAGGCCTACTGCTCACCTAAGGGAGGCGGGAAGTTGAAGTACAAGCTAGTGGCGGCCAAAACCCCCTTCGGCTTCGCG GTAACTGATACGAACTTGCAAGAGAGGGCCTTGGAGAGGGCCTTCGAGCTCGGCTACTTGAGCTGGGCGAGGGGGTGCGA GGTCAAGCGGAGGCCCCGTTACGGCAGCTCGACCTTCGACTTCGAGCTCCGGTGCCCGGAGGGGAGGGCGTTGGTGGAGG CGAAGAGCGCGGACTTGGCATCTTGGAGGGGCTTCGGCATGTGGCCGGACTGCCCTACGGACAGGGGGGTTAGGCACTTG GAGGAGCTCGGCGCCTTCGAGGGGAGGAAGGTGGTTGTCTTCGTGGTGGGCTTCCCGAAGGCCTCGGGCTTCGTGCCCTA CTGCAAGGGCGACCCCCGGGTCTGCGAGCTTTTGGCGAAGTTGGACTTGGAGCTGCGCGCGGTGGGGATGTACTTCGAAC CCCTCACCTCTTCCGTCGTGCTCTACGCGGAGCTGCCGGCCTTGCTCCTAGAGGGCCGCGAGGAGCCTTTGCCTAAAGTT GTGGCGTGA
Upstream 100 bases:
>100_bases TGGTGAACGACGCCAAGTCGCTCAACCCCCGCGCGCCGGTAGTGTTGGTCTCGGTCAAGACCGGCGAGGGCTTAGAGGAG CTCCAGAGGGCCTTGGGCCT
Downstream 100 bases:
>100_bases AGGCCTTTTACCTTTGCCCCCCAGAGCGGCCGGGGTAAAGGGCGGTGGACGTCTGGAAGGCCTTGGAGGACGCTAAGGCA TCCGTGAACGCCAAGGTGGA
Product: sugar fermentation stimulation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MIVPERPLLKLEAFHCTVKEKVNRFVVRASVGEEELLVHNTNTGRLEDLIWEGNEAYCSPKGGGKLKYKLVAAKTPFGFA VTDTNLQERALERAFELGYLSWARGCEVKRRPRYGSSTFDFELRCPEGRALVEAKSADLASWRGFGMWPDCPTDRGVRHL EELGAFEGRKVVVFVVGFPKASGFVPYCKGDPRVCELLAKLDLELRAVGMYFEPLTSSVVLYAELPALLLEGREEPLPKV VA
Sequences:
>Translated_242_residues MIVPERPLLKLEAFHCTVKEKVNRFVVRASVGEEELLVHNTNTGRLEDLIWEGNEAYCSPKGGGKLKYKLVAAKTPFGFA VTDTNLQERALERAFELGYLSWARGCEVKRRPRYGSSTFDFELRCPEGRALVEAKSADLASWRGFGMWPDCPTDRGVRHL EELGAFEGRKVVVFVVGFPKASGFVPYCKGDPRVCELLAKLDLELRAVGMYFEPLTSSVVLYAELPALLLEGREEPLPKV VA >Mature_242_residues MIVPERPLLKLEAFHCTVKEKVNRFVVRASVGEEELLVHNTNTGRLEDLIWEGNEAYCSPKGGGKLKYKLVAAKTPFGFA VTDTNLQERALERAFELGYLSWARGCEVKRRPRYGSSTFDFELRCPEGRALVEAKSADLASWRGFGMWPDCPTDRGVRHL EELGAFEGRKVVVFVVGFPKASGFVPYCKGDPRVCELLAKLDLELRAVGMYFEPLTSSVVLYAELPALLLEGREEPLPKV VA
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005224 [H]
Pfam domain/function: PF03749 SfsA [H]
EC number: NA
Molecular weight: Translated: 27070; Mature: 27070
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVPERPLLKLEAFHCTVKEKVNRFVVRASVGEEELLVHNTNTGRLEDLIWEGNEAYCSP CCCCCCCCEEEEEHEEHHHHHHCEEEEEECCCCCEEEEECCCCCCEEHEEECCCCEEECC KGGGKLKYKLVAAKTPFGFAVTDTNLQERALERAFELGYLSWARGCEVKRRPRYGSSTFD CCCCEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCEE FELRCPEGRALVEAKSADLASWRGFGMWPDCPTDRGVRHLEELGAFEGRKVVVFVVGFPK EEEECCCCCEEEEECCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCC ASGFVPYCKGDPRVCELLAKLDLELRAVGMYFEPLTSSVVLYAELPALLLEGREEPLPKV CCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEHHHHHHHHCCCCCCCCCC VA CC >Mature Secondary Structure MIVPERPLLKLEAFHCTVKEKVNRFVVRASVGEEELLVHNTNTGRLEDLIWEGNEAYCSP CCCCCCCCEEEEEHEEHHHHHHCEEEEEECCCCCEEEEECCCCCCEEHEEECCCCEEECC KGGGKLKYKLVAAKTPFGFAVTDTNLQERALERAFELGYLSWARGCEVKRRPRYGSSTFD CCCCEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCEE FELRCPEGRALVEAKSADLASWRGFGMWPDCPTDRGVRHLEELGAFEGRKVVVFVVGFPK EEEECCCCCEEEEECCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCC ASGFVPYCKGDPRVCELLAKLDLELRAVGMYFEPLTSSVVLYAELPALLLEGREEPLPKV CCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEHHHHHHHHCCCCCCCCCC VA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA