Definition Ignicoccus hospitalis KIN4/I chromosome, complete genome.
Accession NC_009776
Length 1,297,538

Click here to switch to the map view.

The map label for this gene is 156937147

Identifier: 156937147

GI number: 156937147

Start: 309947

End: 310510

Strand: Reverse

Name: 156937147

Synonym: Igni_0353

Alternate gene names: NA

Gene position: 310510-309947 (Counterclockwise)

Preceding gene: 156937148

Following gene: 156937141

Centisome position: 23.93

GC content: 54.96

Gene sequence:

>564_bases
GTGGACGTCTGGAAGGCCTTGGAGGACGCTAAGGCATCCGTGAACGCCAAGGTGGAGGCCCTGGAGAGGGTGAGGGAGAG
GATACCCTTCGAGGGGGCCAAGGCTGTAAACTTGGCTAACGTTTACACGTACATGATCGACGTCCTAGAGAGGATAAGCT
CTATCTTGGAGTGCTTGGGCAACGCTAAAGAGACCAACGCGGTGAGCGTGGGCAAGAACTACTTGAGGGTGAGGGACTCC
AAGTGGTTCGTGGAGGTCGCCGACGGAGGGGTGGTCCTCAAGAGGCTCAACCCCGCCTTGACCATAACCGTAACTCCCGA
GAGCGTGAGGATAGCCACCAGAACCAAGGAAGACAAGGAGATAAAGAGGGAAGCTGTGCTCACCAATTCGGAGTTCGAGA
TCAGGAGGGACAAGTTAGAGGTCAAGGGGAGGTACGCGGACTACGACCAAGTATATGAGAACTCGTACTACATAAGGAAG
GCCTTCAGGGAGCTCGCGAGGGAAGTGATGAAGAAGGGAGAGCCCTTGATACAGCACATGAAGTTCATGAACGTGAGCTG
CTGA

Upstream 100 bases:

>100_bases
TGCCGGCCTTGCTCCTAGAGGGCCGCGAGGAGCCTTTGCCTAAAGTTGTGGCGTGAAGGCCTTTTACCTTTGCCCCCCAG
AGCGGCCGGGGTAAAGGGCG

Downstream 100 bases:

>100_bases
GCGTCACCACGGGGCCCTCTAGGAAAGCCAAGTCCACTTCTTCGATAAACCCCTTAAACGATTTTATGGGAACTATCAGA
GCCCCTTCCCTTATCGGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MDVWKALEDAKASVNAKVEALERVRERIPFEGAKAVNLANVYTYMIDVLERISSILECLGNAKETNAVSVGKNYLRVRDS
KWFVEVADGGVVLKRLNPALTITVTPESVRIATRTKEDKEIKREAVLTNSEFEIRRDKLEVKGRYADYDQVYENSYYIRK
AFRELAREVMKKGEPLIQHMKFMNVSC

Sequences:

>Translated_187_residues
MDVWKALEDAKASVNAKVEALERVRERIPFEGAKAVNLANVYTYMIDVLERISSILECLGNAKETNAVSVGKNYLRVRDS
KWFVEVADGGVVLKRLNPALTITVTPESVRIATRTKEDKEIKREAVLTNSEFEIRRDKLEVKGRYADYDQVYENSYYIRK
AFRELAREVMKKGEPLIQHMKFMNVSC
>Mature_187_residues
MDVWKALEDAKASVNAKVEALERVRERIPFEGAKAVNLANVYTYMIDVLERISSILECLGNAKETNAVSVGKNYLRVRDS
KWFVEVADGGVVLKRLNPALTITVTPESVRIATRTKEDKEIKREAVLTNSEFEIRRDKLEVKGRYADYDQVYENSYYIRK
AFRELAREVMKKGEPLIQHMKFMNVSC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21511; Mature: 21511

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVWKALEDAKASVNAKVEALERVRERIPFEGAKAVNLANVYTYMIDVLERISSILECLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NAKETNAVSVGKNYLRVRDSKWFVEVADGGVVLKRLNPALTITVTPESVRIATRTKEDKE
CCCCCCHHHHCCHHHEEECCCEEEEECCCCEEEEECCCEEEEEECCCCEEEEECCCHHHH
IKREAVLTNSEFEIRRDKLEVKGRYADYDQVYENSYYIRKAFRELAREVMKKGEPLIQHM
HHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHH
KFMNVSC
HHHCCCC
>Mature Secondary Structure
MDVWKALEDAKASVNAKVEALERVRERIPFEGAKAVNLANVYTYMIDVLERISSILECLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NAKETNAVSVGKNYLRVRDSKWFVEVADGGVVLKRLNPALTITVTPESVRIATRTKEDKE
CCCCCCHHHHCCHHHEEECCCEEEEECCCCEEEEECCCEEEEEECCCCEEEEECCCHHHH
IKREAVLTNSEFEIRRDKLEVKGRYADYDQVYENSYYIRKAFRELAREVMKKGEPLIQHM
HHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHH
KFMNVSC
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA