| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937147
Identifier: 156937147
GI number: 156937147
Start: 309947
End: 310510
Strand: Reverse
Name: 156937147
Synonym: Igni_0353
Alternate gene names: NA
Gene position: 310510-309947 (Counterclockwise)
Preceding gene: 156937148
Following gene: 156937141
Centisome position: 23.93
GC content: 54.96
Gene sequence:
>564_bases GTGGACGTCTGGAAGGCCTTGGAGGACGCTAAGGCATCCGTGAACGCCAAGGTGGAGGCCCTGGAGAGGGTGAGGGAGAG GATACCCTTCGAGGGGGCCAAGGCTGTAAACTTGGCTAACGTTTACACGTACATGATCGACGTCCTAGAGAGGATAAGCT CTATCTTGGAGTGCTTGGGCAACGCTAAAGAGACCAACGCGGTGAGCGTGGGCAAGAACTACTTGAGGGTGAGGGACTCC AAGTGGTTCGTGGAGGTCGCCGACGGAGGGGTGGTCCTCAAGAGGCTCAACCCCGCCTTGACCATAACCGTAACTCCCGA GAGCGTGAGGATAGCCACCAGAACCAAGGAAGACAAGGAGATAAAGAGGGAAGCTGTGCTCACCAATTCGGAGTTCGAGA TCAGGAGGGACAAGTTAGAGGTCAAGGGGAGGTACGCGGACTACGACCAAGTATATGAGAACTCGTACTACATAAGGAAG GCCTTCAGGGAGCTCGCGAGGGAAGTGATGAAGAAGGGAGAGCCCTTGATACAGCACATGAAGTTCATGAACGTGAGCTG CTGA
Upstream 100 bases:
>100_bases TGCCGGCCTTGCTCCTAGAGGGCCGCGAGGAGCCTTTGCCTAAAGTTGTGGCGTGAAGGCCTTTTACCTTTGCCCCCCAG AGCGGCCGGGGTAAAGGGCG
Downstream 100 bases:
>100_bases GCGTCACCACGGGGCCCTCTAGGAAAGCCAAGTCCACTTCTTCGATAAACCCCTTAAACGATTTTATGGGAACTATCAGA GCCCCTTCCCTTATCGGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MDVWKALEDAKASVNAKVEALERVRERIPFEGAKAVNLANVYTYMIDVLERISSILECLGNAKETNAVSVGKNYLRVRDS KWFVEVADGGVVLKRLNPALTITVTPESVRIATRTKEDKEIKREAVLTNSEFEIRRDKLEVKGRYADYDQVYENSYYIRK AFRELAREVMKKGEPLIQHMKFMNVSC
Sequences:
>Translated_187_residues MDVWKALEDAKASVNAKVEALERVRERIPFEGAKAVNLANVYTYMIDVLERISSILECLGNAKETNAVSVGKNYLRVRDS KWFVEVADGGVVLKRLNPALTITVTPESVRIATRTKEDKEIKREAVLTNSEFEIRRDKLEVKGRYADYDQVYENSYYIRK AFRELAREVMKKGEPLIQHMKFMNVSC >Mature_187_residues MDVWKALEDAKASVNAKVEALERVRERIPFEGAKAVNLANVYTYMIDVLERISSILECLGNAKETNAVSVGKNYLRVRDS KWFVEVADGGVVLKRLNPALTITVTPESVRIATRTKEDKEIKREAVLTNSEFEIRRDKLEVKGRYADYDQVYENSYYIRK AFRELAREVMKKGEPLIQHMKFMNVSC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21511; Mature: 21511
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVWKALEDAKASVNAKVEALERVRERIPFEGAKAVNLANVYTYMIDVLERISSILECLG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC NAKETNAVSVGKNYLRVRDSKWFVEVADGGVVLKRLNPALTITVTPESVRIATRTKEDKE CCCCCCHHHHCCHHHEEECCCEEEEECCCCEEEEECCCEEEEEECCCCEEEEECCCHHHH IKREAVLTNSEFEIRRDKLEVKGRYADYDQVYENSYYIRKAFRELAREVMKKGEPLIQHM HHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHH KFMNVSC HHHCCCC >Mature Secondary Structure MDVWKALEDAKASVNAKVEALERVRERIPFEGAKAVNLANVYTYMIDVLERISSILECLG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC NAKETNAVSVGKNYLRVRDSKWFVEVADGGVVLKRLNPALTITVTPESVRIATRTKEDKE CCCCCCHHHHCCHHHEEECCCEEEEECCCCEEEEECCCEEEEEECCCCEEEEECCCHHHH IKREAVLTNSEFEIRRDKLEVKGRYADYDQVYENSYYIRKAFRELAREVMKKGEPLIQHM HHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHH KFMNVSC HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA