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The map label for this gene is rbsC [H]

Identifier: 154246355

GI number: 154246355

Start: 2695805

End: 2696887

Strand: Direct

Name: rbsC [H]

Synonym: Xaut_2414

Alternate gene names: 154246355

Gene position: 2695805-2696887 (Clockwise)

Preceding gene: 154246354

Following gene: 154246356

Centisome position: 50.78

GC content: 67.96

Gene sequence:

>1083_bases
ATGACAGACACGAGTGGGGAGAAACGCGGGATGCAGGCGTTCGAAACCGTCCTGAGCAAACAGGACACGCGGGTTGCGGA
GTTCGAGGTCCACGCCAGGTCCCCGCTCCAGATGCTGCAGCATTTCCTGCACGCCAATCCGACCGCGGTACCGGCCATCG
TGCTGGTGCTGGGGGTGGCCGTGTTCTCGGCCATCGTGGGGCCGCGCTTCTACTCGGCCTTCAACCTGTCGCTGATCCTC
CAGCAGGTGACCATCATCTGCATCATCGGGGTGGCGCAGACGCTTATCGTGCTCACGGCCGGCATCGACCTGTCGGTGGG
CGCGGTGATGGTGCTGTGCTCGGTGATCATGGGTAAGCTCGCCGTCGCGCTGGGCCTGCCGGTGCCGGTGGCGTTCGCCG
CCGGGCTCGCCACCGGGGCGGCCTGCGGCGCGTTCAACGGCCTGCTGGTGGTGCGGTTGAAGCTGCCGCCCTTCATCGTG
ACGCTGGGCACCTGGTCCATCTTCTTCTCGCTGAACCTCTGGTATTCCGGCGCCCAGACCATCCGTGCCCAGGACGTGGC
CAAGGCCGCGCCGTTCCTGCAGTGGCTCGGCACGCCGGTGGACCTCTTGGGCGCGCGGCTCACCTACGGCACCTTCTTCA
TGCTGGGGCTGGTGGCCATCGTCTGGTACGTGCTCAACCGCACCGCCCTCGGCCGCCACATCTATGCGGTGGGCGATGAT
CCGGACGCGGCGCGCCTCGCCGGCATCCGTACCGACAAGGTGCTGTTCAGTGTCTATGTGGCGGCGGGGGTCATCTGCGC
GCTGGGGGCGTGGGCGCTCATCGGCCGCATCGGCTCCATCAGCCCGCAGGCGGGGCAGACCGCCAACCTCGACAGCATCA
CCGCGGTGGTGATCGGCGGGGCCAGCCTGTTCGGCGGGCGCGGCTCCATCATCGGCACCCTCATCGGCGCGCTCATCGTC
GGGGTCTCGCGCTCCGGCCTCGCTCTGTCGGGGGTGGATGTGCTGTGGCAGGAGTTTGCCGTGGGCAGCCTCATCATCGT
CGCGGTCACCCTCGACCAGTGGATCCGGAAGGTGTCGGCATGA

Upstream 100 bases:

>100_bases
CCTTCCATCGACACCGACGCCGCCCTGAAGAAATGCTGGGGCTGATGGGCCCCGTTAAGGCACGCGTGCGCCGGCCGAAA
CGGCCGGGGAGGGATCTGCA

Downstream 100 bases:

>100_bases
GCACGAATACTTTCAGCACGAGCCATCTCGGCACGGACACCGGCGTGCGCCGGCCGCTCATCGAGGCGCGGGGCCTGGTC
AAGCGCTACGGCCGTGTCAC

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MTDTSGEKRGMQAFETVLSKQDTRVAEFEVHARSPLQMLQHFLHANPTAVPAIVLVLGVAVFSAIVGPRFYSAFNLSLIL
QQVTIICIIGVAQTLIVLTAGIDLSVGAVMVLCSVIMGKLAVALGLPVPVAFAAGLATGAACGAFNGLLVVRLKLPPFIV
TLGTWSIFFSLNLWYSGAQTIRAQDVAKAAPFLQWLGTPVDLLGARLTYGTFFMLGLVAIVWYVLNRTALGRHIYAVGDD
PDAARLAGIRTDKVLFSVYVAAGVICALGAWALIGRIGSISPQAGQTANLDSITAVVIGGASLFGGRGSIIGTLIGALIV
GVSRSGLALSGVDVLWQEFAVGSLIIVAVTLDQWIRKVSA

Sequences:

>Translated_360_residues
MTDTSGEKRGMQAFETVLSKQDTRVAEFEVHARSPLQMLQHFLHANPTAVPAIVLVLGVAVFSAIVGPRFYSAFNLSLIL
QQVTIICIIGVAQTLIVLTAGIDLSVGAVMVLCSVIMGKLAVALGLPVPVAFAAGLATGAACGAFNGLLVVRLKLPPFIV
TLGTWSIFFSLNLWYSGAQTIRAQDVAKAAPFLQWLGTPVDLLGARLTYGTFFMLGLVAIVWYVLNRTALGRHIYAVGDD
PDAARLAGIRTDKVLFSVYVAAGVICALGAWALIGRIGSISPQAGQTANLDSITAVVIGGASLFGGRGSIIGTLIGALIV
GVSRSGLALSGVDVLWQEFAVGSLIIVAVTLDQWIRKVSA
>Mature_359_residues
TDTSGEKRGMQAFETVLSKQDTRVAEFEVHARSPLQMLQHFLHANPTAVPAIVLVLGVAVFSAIVGPRFYSAFNLSLILQ
QVTIICIIGVAQTLIVLTAGIDLSVGAVMVLCSVIMGKLAVALGLPVPVAFAAGLATGAACGAFNGLLVVRLKLPPFIVT
LGTWSIFFSLNLWYSGAQTIRAQDVAKAAPFLQWLGTPVDLLGARLTYGTFFMLGLVAIVWYVLNRTALGRHIYAVGDDP
DAARLAGIRTDKVLFSVYVAAGVICALGAWALIGRIGSISPQAGQTANLDSITAVVIGGASLFGGRGSIIGTLIGALIVG
VSRSGLALSGVDVLWQEFAVGSLIIVAVTLDQWIRKVSA

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=310, Percent_Identity=36.1290322580645, Blast_Score=141, Evalue=8e-35,
Organism=Escherichia coli, GI1790524, Length=336, Percent_Identity=33.0357142857143, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1788896, Length=315, Percent_Identity=33.015873015873, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI87082395, Length=294, Percent_Identity=32.6530612244898, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI1787794, Length=305, Percent_Identity=32.1311475409836, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1788471, Length=293, Percent_Identity=36.1774744027304, Blast_Score=111, Evalue=9e-26,
Organism=Escherichia coli, GI1787793, Length=294, Percent_Identity=32.312925170068, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI145693214, Length=261, Percent_Identity=35.632183908046, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1789992, Length=137, Percent_Identity=38.6861313868613, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI145693152, Length=295, Percent_Identity=27.7966101694915, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 37660; Mature: 37529

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTSGEKRGMQAFETVLSKQDTRVAEFEVHARSPLQMLQHFLHANPTAVPAIVLVLGVA
CCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
VFSAIVGPRFYSAFNLSLILQQVTIICIIGVAQTLIVLTAGIDLSVGAVMVLCSVIMGKL
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AVALGLPVPVAFAAGLATGAACGAFNGLLVVRLKLPPFIVTLGTWSIFFSLNLWYSGAQT
HHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEHHEEEEEEEHHHCCCCHH
IRAQDVAKAAPFLQWLGTPVDLLGARLTYGTFFMLGLVAIVWYVLNRTALGRHIYAVGDD
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEECCC
PDAARLAGIRTDKVLFSVYVAAGVICALGAWALIGRIGSISPQAGQTANLDSITAVVIGG
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEEC
ASLFGGRGSIIGTLIGALIVGVSRSGLALSGVDVLWQEFAVGSLIIVAVTLDQWIRKVSA
HHHCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDTSGEKRGMQAFETVLSKQDTRVAEFEVHARSPLQMLQHFLHANPTAVPAIVLVLGVA
CCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
VFSAIVGPRFYSAFNLSLILQQVTIICIIGVAQTLIVLTAGIDLSVGAVMVLCSVIMGKL
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AVALGLPVPVAFAAGLATGAACGAFNGLLVVRLKLPPFIVTLGTWSIFFSLNLWYSGAQT
HHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEHHEEEEEEEHHHCCCCHH
IRAQDVAKAAPFLQWLGTPVDLLGARLTYGTFFMLGLVAIVWYVLNRTALGRHIYAVGDD
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEECCC
PDAARLAGIRTDKVLFSVYVAAGVICALGAWALIGRIGSISPQAGQTANLDSITAVVIGG
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEEC
ASLFGGRGSIIGTLIGALIVGVSRSGLALSGVDVLWQEFAVGSLIIVAVTLDQWIRKVSA
HHHCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]