Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is yoaE [H]
Identifier: 154246267
GI number: 154246267
Start: 2597831
End: 2599957
Strand: Reverse
Name: yoaE [H]
Synonym: Xaut_2325
Alternate gene names: 154246267
Gene position: 2599957-2597831 (Counterclockwise)
Preceding gene: 154246268
Following gene: 154246263
Centisome position: 48.97
GC content: 69.86
Gene sequence:
>2127_bases GTGCATGCCCCGAACACGTCGCCGCAGGCCTCCGTTACGGCTGCCCGCCCGGTCCAGACGCGCGCCTCCGTGTGCCCCCA CGACTGCCCCTCCACCTGCTCCCTGGAGGTGGACGTGATGCCCGACGGCCGCATCGGCCGCGTGCGCGGGGCCAAGGCCC AGACCTACACCGCCGGCGTCATCTGCGCGAAGGTGGCCCGCTATGCGGAGCGGGCGAACCATCCCGAGCGCCTCACCCAT CCTTTGATGCGCAGCGGCCCCAAGGGCTCCGGCCAGTTCACCCGCATCTCATGGGACGAGGCCCTCGACCGCATCGCAGC AGGGCTGCTGGAGGCCGAGCGCACGCACGGCGCCCAATCGGTCTGGCCTTATTATTATGCCGGCACCATGGGCCTGGTGA TGCGCGACGGCATCAATCGGCTGACCCATGCCAAGGGCTATTCCCGCTTCTTCGCCACCATCTGCGTGAACCCGGCCTGG AGCGGCTACATGGCGGGGGCCGGGCGCATCTCCGGCGCCGACCCGCGCGAGATGGCGGCCTCCGACCTCATCACCCTGTG GGGCACCAACGCGGTCTCGACCCAGGTCAATGTGATGACCCACGCCATGCGCGCCCGCAAGGAGCGCGGGGCGAAGCTTG CGGTGGTGGATGTCTATCGCACCCCCACCATGGAGCAGGCGGACCTTCCCCTCCTCATCCGCCCCGGCACCGACGGGGCG CTCGCCTGCGCCGTCATGCACGTGCTGTTCCGCGACGGCCACGCCGACCGCGCCTATCTCGACCGCTACGCCCGCGACAC CGAGGCACTCGAAGAGCACCTGAAAACCCGCACGCCGGCATGGGCCGCCGCCATCTGCGGGCTCTCGGTGGACGAGATCG AGACCTACGCGCGCCTCGTGGGCACCACGCCCCGCGCCTTCTTCCGCGTCGGCTACGGCTTCTCCCGCTCCCGCAACGGG GCGGTGAACATGCATGCCGTGGCCTCCATCCCGGTGGTGGCGGGCAGTTGGCAACATGAGGGCGGCGGAGCGCTGCATTC GCTGTCAGGCACCTATGGCTGGCGCAAGAAGATGATCGAGGGGCTGGACAAGCTGGATCCGAGGACCCGCCAGCTCGACC AGTCCCGCATCGGCCCCATCCTGATGGGAGAGGAGGACGCACTGGCTGGCGGGCCGCCGGTGAAGGCGCTGTTCATCCAG AACACCAATCCGGTGGCCATCGCCCCGGAGCAGGAGAAGGTGCGGGCCGGATTCCTGCGCGAGGACCTGTTCGTGGCCGT ACACGAGCAGTTCATGACCGACACGGCGCTCCTCGCCGACATCGTGCTCCCCGCCACCATGTTCACCGAGCATGACGACC TCTACCAGGCCGGCGGGCACCCCCACATCCAGCTCGGTCCGAAGCTGGTGGAGCCGCCGGGCGAGTGCCGCTCCAACCAT GAGGTGATCGCTGCCCTGGCCGAGCGCCTGGGCGCGGAGCACCCCGGCTTTGCCATGAGCCCGCGCGACCTCATCGACTG GACCCTGCGCGAGAGCGGCCGCGCGCCCGTCAATGAGCTGGAGAAGGCGCGCTTCATCGAGGTGGCGCAGAGCTTCGAGG ACGCGCATTTCCTCAATGGCTTCGGCCATCGCGACAAGCGCTTCCACTTCGCCGTGGACTGGGCCAACCTCGGCTTTCCG GCCCCGGCCAAGTTCGGCCCGGTGGCGGACATGCCGTCTTTGCCCGACCACTGGGCGGTGATCGAGGAAGCGACGCCCGA GCACCCGTTCCGTCTGGTGACCGCGCCGGCGCGCAACTTCCTCAATTCCTCCTTCACCGAGACCCCCACCTCCGCGGCAC GGGAGGGCGAGCCCTCGCTGCTGATCCATCCGGAGGATGCGGCGGCTCTGAAGGTGGCCGACGGCGACCTCGTGGCGGTG GAGAACCCCCGCGGGCGAGTGGTGCTGAAGGCGCGCCTGTTCGACGGCGTGCTGCGGGGCGTGGTGGTGTCGGAGCAGAT CCAGCCGGCGCGGGCCCATCGCGAGGGCCGCGGCATCAACACCCTGACCGGCGCCGATCCGGTGGCCCCGGTGGGCGGCG CCGCATTCCACGACAACCGCGTGCGGCTGGAGAAGCTGGCGGATTGA
Upstream 100 bases:
>100_bases CGCGGGCCATCGCCCAGGCCGGGCACGGCGCCTGAGCCGAGCCGGCGGGAAAAGAGGGGGCGACGGCGACCGTCTCCCCC TTTATCCTGAGGGCATGAAC
Downstream 100 bases:
>100_bases CATTGGACAGACCCTCTCCGCTCGCGGAGAGGGGGCGTCTCACACCGCCGGCACCACCAGCGGTTTCAGCCCGCCCTTGG CGCCCGCGATCGCCACCCGC
Product: molybdopterin oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 708; Mature: 708
Protein sequence:
>708_residues MHAPNTSPQASVTAARPVQTRASVCPHDCPSTCSLEVDVMPDGRIGRVRGAKAQTYTAGVICAKVARYAERANHPERLTH PLMRSGPKGSGQFTRISWDEALDRIAAGLLEAERTHGAQSVWPYYYAGTMGLVMRDGINRLTHAKGYSRFFATICVNPAW SGYMAGAGRISGADPREMAASDLITLWGTNAVSTQVNVMTHAMRARKERGAKLAVVDVYRTPTMEQADLPLLIRPGTDGA LACAVMHVLFRDGHADRAYLDRYARDTEALEEHLKTRTPAWAAAICGLSVDEIETYARLVGTTPRAFFRVGYGFSRSRNG AVNMHAVASIPVVAGSWQHEGGGALHSLSGTYGWRKKMIEGLDKLDPRTRQLDQSRIGPILMGEEDALAGGPPVKALFIQ NTNPVAIAPEQEKVRAGFLREDLFVAVHEQFMTDTALLADIVLPATMFTEHDDLYQAGGHPHIQLGPKLVEPPGECRSNH EVIAALAERLGAEHPGFAMSPRDLIDWTLRESGRAPVNELEKARFIEVAQSFEDAHFLNGFGHRDKRFHFAVDWANLGFP APAKFGPVADMPSLPDHWAVIEEATPEHPFRLVTAPARNFLNSSFTETPTSAAREGEPSLLIHPEDAAALKVADGDLVAV ENPRGRVVLKARLFDGVLRGVVVSEQIQPARAHREGRGINTLTGADPVAPVGGAAFHDNRVRLEKLAD
Sequences:
>Translated_708_residues MHAPNTSPQASVTAARPVQTRASVCPHDCPSTCSLEVDVMPDGRIGRVRGAKAQTYTAGVICAKVARYAERANHPERLTH PLMRSGPKGSGQFTRISWDEALDRIAAGLLEAERTHGAQSVWPYYYAGTMGLVMRDGINRLTHAKGYSRFFATICVNPAW SGYMAGAGRISGADPREMAASDLITLWGTNAVSTQVNVMTHAMRARKERGAKLAVVDVYRTPTMEQADLPLLIRPGTDGA LACAVMHVLFRDGHADRAYLDRYARDTEALEEHLKTRTPAWAAAICGLSVDEIETYARLVGTTPRAFFRVGYGFSRSRNG AVNMHAVASIPVVAGSWQHEGGGALHSLSGTYGWRKKMIEGLDKLDPRTRQLDQSRIGPILMGEEDALAGGPPVKALFIQ NTNPVAIAPEQEKVRAGFLREDLFVAVHEQFMTDTALLADIVLPATMFTEHDDLYQAGGHPHIQLGPKLVEPPGECRSNH EVIAALAERLGAEHPGFAMSPRDLIDWTLRESGRAPVNELEKARFIEVAQSFEDAHFLNGFGHRDKRFHFAVDWANLGFP APAKFGPVADMPSLPDHWAVIEEATPEHPFRLVTAPARNFLNSSFTETPTSAAREGEPSLLIHPEDAAALKVADGDLVAV ENPRGRVVLKARLFDGVLRGVVVSEQIQPARAHREGRGINTLTGADPVAPVGGAAFHDNRVRLEKLAD >Mature_708_residues MHAPNTSPQASVTAARPVQTRASVCPHDCPSTCSLEVDVMPDGRIGRVRGAKAQTYTAGVICAKVARYAERANHPERLTH PLMRSGPKGSGQFTRISWDEALDRIAAGLLEAERTHGAQSVWPYYYAGTMGLVMRDGINRLTHAKGYSRFFATICVNPAW SGYMAGAGRISGADPREMAASDLITLWGTNAVSTQVNVMTHAMRARKERGAKLAVVDVYRTPTMEQADLPLLIRPGTDGA LACAVMHVLFRDGHADRAYLDRYARDTEALEEHLKTRTPAWAAAICGLSVDEIETYARLVGTTPRAFFRVGYGFSRSRNG AVNMHAVASIPVVAGSWQHEGGGALHSLSGTYGWRKKMIEGLDKLDPRTRQLDQSRIGPILMGEEDALAGGPPVKALFIQ NTNPVAIAPEQEKVRAGFLREDLFVAVHEQFMTDTALLADIVLPATMFTEHDDLYQAGGHPHIQLGPKLVEPPGECRSNH EVIAALAERLGAEHPGFAMSPRDLIDWTLRESGRAPVNELEKARFIEVAQSFEDAHFLNGFGHRDKRFHFAVDWANLGFP APAKFGPVADMPSLPDHWAVIEEATPEHPFRLVTAPARNFLNSSFTETPTSAAREGEPSLLIHPEDAAALKVADGDLVAV ENPRGRVVLKARLFDGVLRGVVVSEQIQPARAHREGRGINTLTGADPVAPVGGAAFHDNRVRLEKLAD
Specific function: Terminal Reductase During Anaerobic Growth On Various Sulfoxide And N-Oxide Compounds (By Similarity). [C]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Cytoplasm Face Of The Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787870, Length=773, Percent_Identity=25.8732212160414, Blast_Score=168, Evalue=1e-42, Organism=Escherichia coli, GI87081797, Length=776, Percent_Identity=24.0979381443299, Blast_Score=161, Evalue=2e-40, Organism=Escherichia coli, GI171474008, Length=533, Percent_Identity=28.5178236397749, Blast_Score=157, Evalue=3e-39, Organism=Escherichia coli, GI3868721, Length=712, Percent_Identity=24.0168539325843, Blast_Score=128, Evalue=1e-30, Organism=Escherichia coli, GI145693196, Length=665, Percent_Identity=25.1127819548872, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI87081994, Length=714, Percent_Identity=23.6694677871148, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1787231, Length=744, Percent_Identity=23.252688172043, Blast_Score=99, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 [H]
Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.8.99.- [C]
Molecular weight: Translated: 77066; Mature: 77066
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAPNTSPQASVTAARPVQTRASVCPHDCPSTCSLEVDVMPDGRIGRVRGAKAQTYTAGV CCCCCCCCCCCEEECCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHH ICAKVARYAERANHPERLTHPLMRSGPKGSGQFTRISWDEALDRIAAGLLEAERTHGAQS HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCC VWPYYYAGTMGLVMRDGINRLTHAKGYSRFFATICVNPAWSGYMAGAGRISGADPREMAA CCCCHHHCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH SDLITLWGTNAVSTQVNVMTHAMRARKERGAKLAVVDVYRTPTMEQADLPLLIRPGTDGA HHEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEECCCCHH LACAVMHVLFRDGHADRAYLDRYARDTEALEEHLKTRTPAWAAAICGLSVDEIETYARLV HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHH GTTPRAFFRVGYGFSRSRNGAVNMHAVASIPVVAGSWQHEGGGALHSLSGTYGWRKKMIE CCCCHHHHEECCCCCCCCCCCEEEEEEEECCEEECCCCCCCCCCEECCCCCHHHHHHHHH GLDKLDPRTRQLDQSRIGPILMGEEDALAGGPPVKALFIQNTNPVAIAPEQEKVRAGFLR HHHHCCCHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEECCCCEEECCCHHHHHHHHHH EDLFVAVHEQFMTDTALLADIVLPATMFTEHDDLYQAGGHPHIQLGPKLVEPPGECRSNH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEECCEECCCCCCCCCCH EVIAALAERLGAEHPGFAMSPRDLIDWTLRESGRAPVNELEKARFIEVAQSFEDAHFLNG HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC FGHRDKRFHFAVDWANLGFPAPAKFGPVADMPSLPDHWAVIEEATPEHPFRLVTAPARNF CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEHHHHHH LNSSFTETPTSAAREGEPSLLIHPEDAAALKVADGDLVAVENPRGRVVLKARLFDGVLRG HCCCCCCCCCHHHHCCCCCEEEECCCCCEEEEECCCEEEEECCCCCEEEEHHHHHHHHHH VVVSEQIQPARAHREGRGINTLTGADPVAPVGGAAFHDNRVRLEKLAD HHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHCC >Mature Secondary Structure MHAPNTSPQASVTAARPVQTRASVCPHDCPSTCSLEVDVMPDGRIGRVRGAKAQTYTAGV CCCCCCCCCCCEEECCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHH ICAKVARYAERANHPERLTHPLMRSGPKGSGQFTRISWDEALDRIAAGLLEAERTHGAQS HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCC VWPYYYAGTMGLVMRDGINRLTHAKGYSRFFATICVNPAWSGYMAGAGRISGADPREMAA CCCCHHHCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH SDLITLWGTNAVSTQVNVMTHAMRARKERGAKLAVVDVYRTPTMEQADLPLLIRPGTDGA HHEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEECCCCHH LACAVMHVLFRDGHADRAYLDRYARDTEALEEHLKTRTPAWAAAICGLSVDEIETYARLV HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHH GTTPRAFFRVGYGFSRSRNGAVNMHAVASIPVVAGSWQHEGGGALHSLSGTYGWRKKMIE CCCCHHHHEECCCCCCCCCCCEEEEEEEECCEEECCCCCCCCCCEECCCCCHHHHHHHHH GLDKLDPRTRQLDQSRIGPILMGEEDALAGGPPVKALFIQNTNPVAIAPEQEKVRAGFLR HHHHCCCHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEECCCCEEECCCHHHHHHHHHH EDLFVAVHEQFMTDTALLADIVLPATMFTEHDDLYQAGGHPHIQLGPKLVEPPGECRSNH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEECCEECCCCCCCCCCH EVIAALAERLGAEHPGFAMSPRDLIDWTLRESGRAPVNELEKARFIEVAQSFEDAHFLNG HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC FGHRDKRFHFAVDWANLGFPAPAKFGPVADMPSLPDHWAVIEEATPEHPFRLVTAPARNF CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEHHHHHH LNSSFTETPTSAAREGEPSLLIHPEDAAALKVADGDLVAVENPRGRVVLKARLFDGVLRG HCCCCCCCCCHHHHCCCCCEEEECCCCCEEEEECCCEEEEECCCCCEEEEHHHHHHHHHH VVVSEQIQPARAHREGRGINTLTGADPVAPVGGAAFHDNRVRLEKLAD HHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: May Bind 4Fe-4S Cluster. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]