Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is yjbE [H]
Identifier: 154246268
GI number: 154246268
Start: 2600023
End: 2600763
Strand: Reverse
Name: yjbE [H]
Synonym: Xaut_2326
Alternate gene names: 154246268
Gene position: 2600763-2600023 (Counterclockwise)
Preceding gene: 154246269
Following gene: 154246267
Centisome position: 48.99
GC content: 67.34
Gene sequence:
>741_bases ATGGATTTTACCGCCCCCACATTCTGGGTCTCGCTGCTGCAAATCATCTGGATCGATCTCTTGCTGTCCGGCGACAATGC GGTCGTCATCGCGCTGGCCTGCCGGTCGCTGCCGCCCAGTCAGCGCAAATGGGGCATCCTGCTCGGCGCCGGTGCGGCCG TGGGGCTGCGCATCCTGTTCGCCCTCGCCGTCTCCGCGCTGCTCGGCATACCATTCCTGAAGGTGGCAGGCGGCCTGCTG CTGTTCTGGATCGCCATCAAGCTGGTCACCGACAATGACGGCGACAGCCACGAGGTCGCGGCGTCCGACAGCCTGTGGAA GGCGGTGCGCACCATCGCCATCGCCGATGCCGTCATGAGCCTCGACAATGTGGTGGCCATCGCCGCCGCCGCGCGCGGCC ACTGGGAACTGTTCGTGTTCGGGCTGCTGCTGACCATCCCGCTCATCGTCTTCGGATCGCAGCTGCTACTGCGGCTTTTG ACCCGCTTCCCCATCCTGATCTGGGCCGGTGCGGCGCTGCTGGGCTGGATCGCCGGCGAGATGCTGGTGGGCGACGTGAT GTCCCTCAACGCCCTTCAGCACCTGGACCCGTCGCTGGTGAAGATGGACGACCACGGCATGCACCCGGCCCCGCTGCCCC ACTATGTGGCAAGCGTCATCGGTGCCGCCATCGTGCTGGGCGCCGGCTATGTGCTGCGCAACCGGGCGCGGGCCATCGCC CAGGCCGGGCACGGCGCCTGA
Upstream 100 bases:
>100_bases GTAACGTCATCGAAAGGTTCGCCTCGACTTCCGCTTGGGAATGAGACACGCACACCTGTTGCGGGCGCGTGGTGGTCCAG CGCGCTGCATGGAGTGAACG
Downstream 100 bases:
>100_bases GCCGAGCCGGCGGGAAAAGAGGGGGCGACGGCGACCGTCTCCCCCTTTATCCTGAGGGCATGAACGTGCATGCCCCGAAC ACGTCGCCGCAGGCCTCCGT
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MDFTAPTFWVSLLQIIWIDLLLSGDNAVVIALACRSLPPSQRKWGILLGAGAAVGLRILFALAVSALLGIPFLKVAGGLL LFWIAIKLVTDNDGDSHEVAASDSLWKAVRTIAIADAVMSLDNVVAIAAAARGHWELFVFGLLLTIPLIVFGSQLLLRLL TRFPILIWAGAALLGWIAGEMLVGDVMSLNALQHLDPSLVKMDDHGMHPAPLPHYVASVIGAAIVLGAGYVLRNRARAIA QAGHGA
Sequences:
>Translated_246_residues MDFTAPTFWVSLLQIIWIDLLLSGDNAVVIALACRSLPPSQRKWGILLGAGAAVGLRILFALAVSALLGIPFLKVAGGLL LFWIAIKLVTDNDGDSHEVAASDSLWKAVRTIAIADAVMSLDNVVAIAAAARGHWELFVFGLLLTIPLIVFGSQLLLRLL TRFPILIWAGAALLGWIAGEMLVGDVMSLNALQHLDPSLVKMDDHGMHPAPLPHYVASVIGAAIVLGAGYVLRNRARAIA QAGHGA >Mature_246_residues MDFTAPTFWVSLLQIIWIDLLLSGDNAVVIALACRSLPPSQRKWGILLGAGAAVGLRILFALAVSALLGIPFLKVAGGLL LFWIAIKLVTDNDGDSHEVAASDSLWKAVRTIAIADAVMSLDNVVAIAAAARGHWELFVFGLLLTIPLIVFGSQLLLRLL TRFPILIWAGAALLGWIAGEMLVGDVMSLNALQHLDPSLVKMDDHGMHPAPLPHYVASVIGAAIVLGAGYVLRNRARAIA QAGHGA
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI1788119, Length=187, Percent_Identity=26.7379679144385, Blast_Score=61, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022301 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 26070; Mature: 26070
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFTAPTFWVSLLQIIWIDLLLSGDNAVVIALACRSLPPSQRKWGILLGAGAAVGLRILF CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHCCCCCCCCCEEEEECCHHHHHHHHH ALAVSALLGIPFLKVAGGLLLFWIAIKLVTDNDGDSHEVAASDSLWKAVRTIAIADAVMS HHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LDNVVAIAAAARGHWELFVFGLLLTIPLIVFGSQLLLRLLTRFPILIWAGAALLGWIAGE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLVGDVMSLNALQHLDPSLVKMDDHGMHPAPLPHYVASVIGAAIVLGAGYVLRNRARAIA HHHHHHHHHHHHHHCCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAGHGA HCCCCC >Mature Secondary Structure MDFTAPTFWVSLLQIIWIDLLLSGDNAVVIALACRSLPPSQRKWGILLGAGAAVGLRILF CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHCCCCCCCCCEEEEECCHHHHHHHHH ALAVSALLGIPFLKVAGGLLLFWIAIKLVTDNDGDSHEVAASDSLWKAVRTIAIADAVMS HHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LDNVVAIAAAARGHWELFVFGLLLTIPLIVFGSQLLLRLLTRFPILIWAGAALLGWIAGE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLVGDVMSLNALQHLDPSLVKMDDHGMHPAPLPHYVASVIGAAIVLGAGYVLRNRARAIA HHHHHHHHHHHHHHCCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAGHGA HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]