Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is katA [H]
Identifier: 154246263
GI number: 154246263
Start: 2593438
End: 2594943
Strand: Reverse
Name: katA [H]
Synonym: Xaut_2321
Alternate gene names: 154246263
Gene position: 2594943-2593438 (Counterclockwise)
Preceding gene: 154246267
Following gene: 154246261
Centisome position: 48.88
GC content: 65.01
Gene sequence:
>1506_bases ATGACGCGACCCACACTCACCACCACGGCCGGCAACCCCATCGCCGACAATCAGAATTCGCTGACCGCCGGCGAGCGCGG CCCGGTGCTGATGCAGGACTACCAGCTGCTCGAGAAGCTGGCGCACCAGAACCGCGAGCGCATCCCCGAGCGCGTGGTGC ATGCCAAGGGCTGGGGCGCTCACGGCACCCTCACCATCACCGGCGACATCTCGAAATACACCAAGGCGGCGGCGCTCCAG CCCGGCGCGCAGACCCCCATGATCGCCCGCTTCTCCACCGTGGCCGGTGAGCTGGGCGCGGCGGATGCCGAGCGCGACGT GCGCGGCTTCGCCCTCAAATTCTATACGCCGGAAGGCAACTGGGACCTCGTAGGCAACAACACTCCGGTGTTTTTCGTCC GCGACCCCTACAAGTTCCCGGACTTCATCCACACCCAGAAGCGCCACCCCAAGACCAACCTGCGCTCGCCCACCGCCATG TGGGACTTCTGGTCCCTGTCACCGGAGAGCCTGCACCAGGTGACCATCCTGTTCTCCGACCGCGGCCTGCCCGTGGGCGT GCGGAACATGAACGGCTACGGCTCGCACACCTATTCCTTCGTCAACGCGGCTGGCGAGCGGTTCTGGGTGAAGTTCCACT TCAAGACGCTTCAGGGCCATGAGCACTGGACCAATGCGGAGGCCACGCAGGTGGTGGGCCGCACCCGCGAATCCACGCAG GAAGACCTGTTCGGCGCCATCGAAGCCGGCAACTTCCCCAAGTGGAAGGTGCAGGTCCAGATCATGCCGGAACTGGATGC GGAGAAGACCTCCTACAATCCGTTCGACCTCACCAAGGTGTGGCCCCACGGCGAGTATCCGCCCATCGACATCGGCGTGA TGGAGCTGAACCGCAATCCGGAGAATTATTTCGCGGAGATCGAGCAGGCGGCGTTCTCACCGTCCAACATCGTGCCCGGC ATCTCGTTCTCGCCGGACAAGATGCTGCAGGCCCGCATCTTCTCCTATGCGGATGCGCACCGCCACCGCATCGGCACCCA TTACGAGCACCTGCCGGTGAACGCCCCCAAGTGCCCGGTCCATCACTATCACAAGGACGGCGCCATGCGCTTCTTCCCGC AGGTGACGGGCAGCACCGATGCCTATTACGAGCCCAACTCGTTCGGCGGTGCGAAGGAAGACGCCAAATATGCCGAGCCT CCGCTGAAGATCTCGGGCGATGCGGAACGCTACAACCACCGCATCGGCAATGACGACTTCTCCCAGCCGCGGGCGCTGTT CGAGCTGTTCGATGCCGGCCAGCGGGCGCGCCTTTACTCCAACCTCGCGGCGGGCATGTACGGCATCCCGCAGGAGATCG CGGACCGGCAGATCGCGCTGTTCACGCAGATCCACCCGGAATACGGGGCGGGGGTGCGCGCGGCGCTGGAGCAGGAAACC CGCCAGAAGGCGGCGGAAACGGCGCAGCAGCAGAAGAATCCATCGGGTCCCGTCGCCGCCGAGTGA
Upstream 100 bases:
>100_bases TTATCGAATCTTGAACGCAATCTGATTTGTAGTCAGTCCCGGAGACGCCCATCCTGCGCTCGTGATTTTCGCCCTCCGGG CCTTTTCAGGGAGCCCATTC
Downstream 100 bases:
>100_bases ACGGCCGGGAAGATGCGGGGGACGCCGGGCGGCTCACCGCCCGGCGCCCGGAAAGGGGATGGGCTCCGACCCATCCCCTT TTTGATTCGCGGAGTCCTCG
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MTRPTLTTTAGNPIADNQNSLTAGERGPVLMQDYQLLEKLAHQNRERIPERVVHAKGWGAHGTLTITGDISKYTKAAALQ PGAQTPMIARFSTVAGELGAADAERDVRGFALKFYTPEGNWDLVGNNTPVFFVRDPYKFPDFIHTQKRHPKTNLRSPTAM WDFWSLSPESLHQVTILFSDRGLPVGVRNMNGYGSHTYSFVNAAGERFWVKFHFKTLQGHEHWTNAEATQVVGRTRESTQ EDLFGAIEAGNFPKWKVQVQIMPELDAEKTSYNPFDLTKVWPHGEYPPIDIGVMELNRNPENYFAEIEQAAFSPSNIVPG ISFSPDKMLQARIFSYADAHRHRIGTHYEHLPVNAPKCPVHHYHKDGAMRFFPQVTGSTDAYYEPNSFGGAKEDAKYAEP PLKISGDAERYNHRIGNDDFSQPRALFELFDAGQRARLYSNLAAGMYGIPQEIADRQIALFTQIHPEYGAGVRAALEQET RQKAAETAQQQKNPSGPVAAE
Sequences:
>Translated_501_residues MTRPTLTTTAGNPIADNQNSLTAGERGPVLMQDYQLLEKLAHQNRERIPERVVHAKGWGAHGTLTITGDISKYTKAAALQ PGAQTPMIARFSTVAGELGAADAERDVRGFALKFYTPEGNWDLVGNNTPVFFVRDPYKFPDFIHTQKRHPKTNLRSPTAM WDFWSLSPESLHQVTILFSDRGLPVGVRNMNGYGSHTYSFVNAAGERFWVKFHFKTLQGHEHWTNAEATQVVGRTRESTQ EDLFGAIEAGNFPKWKVQVQIMPELDAEKTSYNPFDLTKVWPHGEYPPIDIGVMELNRNPENYFAEIEQAAFSPSNIVPG ISFSPDKMLQARIFSYADAHRHRIGTHYEHLPVNAPKCPVHHYHKDGAMRFFPQVTGSTDAYYEPNSFGGAKEDAKYAEP PLKISGDAERYNHRIGNDDFSQPRALFELFDAGQRARLYSNLAAGMYGIPQEIADRQIALFTQIHPEYGAGVRAALEQET RQKAAETAQQQKNPSGPVAAE >Mature_500_residues TRPTLTTTAGNPIADNQNSLTAGERGPVLMQDYQLLEKLAHQNRERIPERVVHAKGWGAHGTLTITGDISKYTKAAALQP GAQTPMIARFSTVAGELGAADAERDVRGFALKFYTPEGNWDLVGNNTPVFFVRDPYKFPDFIHTQKRHPKTNLRSPTAMW DFWSLSPESLHQVTILFSDRGLPVGVRNMNGYGSHTYSFVNAAGERFWVKFHFKTLQGHEHWTNAEATQVVGRTRESTQE DLFGAIEAGNFPKWKVQVQIMPELDAEKTSYNPFDLTKVWPHGEYPPIDIGVMELNRNPENYFAEIEQAAFSPSNIVPGI SFSPDKMLQARIFSYADAHRHRIGTHYEHLPVNAPKCPVHHYHKDGAMRFFPQVTGSTDAYYEPNSFGGAKEDAKYAEPP LKISGDAERYNHRIGNDDFSQPRALFELFDAGQRARLYSNLAAGMYGIPQEIADRQIALFTQIHPEYGAGVRAALEQETR QKAAETAQQQKNPSGPVAAE
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=482, Percent_Identity=50.4149377593361, Blast_Score=493, Evalue=1e-139, Organism=Escherichia coli, GI48994891, Length=416, Percent_Identity=44.9519230769231, Blast_Score=352, Evalue=4e-98, Organism=Caenorhabditis elegans, GI71998444, Length=481, Percent_Identity=52.1829521829522, Blast_Score=501, Evalue=1e-142, Organism=Caenorhabditis elegans, GI25151141, Length=478, Percent_Identity=51.8828451882845, Blast_Score=495, Evalue=1e-140, Organism=Caenorhabditis elegans, GI25147792, Length=479, Percent_Identity=51.5657620041754, Blast_Score=494, Evalue=1e-140, Organism=Saccharomyces cerevisiae, GI6320462, Length=489, Percent_Identity=43.3537832310838, Blast_Score=375, Evalue=1e-105, Organism=Saccharomyces cerevisiae, GI6321525, Length=504, Percent_Identity=37.8968253968254, Blast_Score=316, Evalue=5e-87, Organism=Drosophila melanogaster, GI17981717, Length=469, Percent_Identity=48.1876332622601, Blast_Score=454, Evalue=1e-128, Organism=Drosophila melanogaster, GI19920968, Length=476, Percent_Identity=43.0672268907563, Blast_Score=416, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 56143; Mature: 56012
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS00437 CATALASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPTLTTTAGNPIADNQNSLTAGERGPVLMQDYQLLEKLAHQNRERIPERVVHAKGWGA CCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC HGTLTITGDISKYTKAAALQPGAQTPMIARFSTVAGELGAADAERDVRGFALKFYTPEGN CEEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCC WDLVGNNTPVFFVRDPYKFPDFIHTQKRHPKTNLRSPTAMWDFWSLSPESLHQVTILFSD EEEECCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEECCCCHHHCEEEEEEEEC RGLPVGVRNMNGYGSHTYSFVNAAGERFWVKFHFKTLQGHEHWTNAEATQVVGRTRESTQ CCCEEEEECCCCCCCHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCHHHHHHHCCHHHHH EDLFGAIEAGNFPKWKVQVQIMPELDAEKTSYNPFDLTKVWPHGEYPPIDIGVMELNRNP HHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCH ENYFAEIEQAAFSPSNIVPGISFSPDKMLQARIFSYADAHRHRIGTHYEHLPVNAPKCPV HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC HHYHKDGAMRFFPQVTGSTDAYYEPNSFGGAKEDAKYAEPPLKISGDAERYNHRIGNDDF CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCEEECCCHHHHHCCCCCCCC SQPRALFELFDAGQRARLYSNLAAGMYGIPQEIADRQIALFTQIHPEYGAGVRAALEQET CHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCCEEEEEEEECCCCCCCHHHHHHHHH RQKAAETAQQQKNPSGPVAAE HHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TRPTLTTTAGNPIADNQNSLTAGERGPVLMQDYQLLEKLAHQNRERIPERVVHAKGWGA CCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC HGTLTITGDISKYTKAAALQPGAQTPMIARFSTVAGELGAADAERDVRGFALKFYTPEGN CEEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCC WDLVGNNTPVFFVRDPYKFPDFIHTQKRHPKTNLRSPTAMWDFWSLSPESLHQVTILFSD EEEECCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEECCCCHHHCEEEEEEEEC RGLPVGVRNMNGYGSHTYSFVNAAGERFWVKFHFKTLQGHEHWTNAEATQVVGRTRESTQ CCCEEEEECCCCCCCHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCHHHHHHHCCHHHHH EDLFGAIEAGNFPKWKVQVQIMPELDAEKTSYNPFDLTKVWPHGEYPPIDIGVMELNRNP HHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCH ENYFAEIEQAAFSPSNIVPGISFSPDKMLQARIFSYADAHRHRIGTHYEHLPVNAPKCPV HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC HHYHKDGAMRFFPQVTGSTDAYYEPNSFGGAKEDAKYAEPPLKISGDAERYNHRIGNDDF CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCEEECCCHHHHHCCCCCCCC SQPRALFELFDAGQRARLYSNLAAGMYGIPQEIADRQIALFTQIHPEYGAGVRAALEQET CHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCCEEEEEEEECCCCCCCHHHHHHHHH RQKAAETAQQQKNPSGPVAAE HHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7961511 [H]