Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is cah [H]
Identifier: 154246171
GI number: 154246171
Start: 2488064
End: 2488813
Strand: Direct
Name: cah [H]
Synonym: Xaut_2228
Alternate gene names: 154246171
Gene position: 2488064-2488813 (Clockwise)
Preceding gene: 154246170
Following gene: 154246176
Centisome position: 46.87
GC content: 68.4
Gene sequence:
>750_bases ATGGCCGTTACACGTCGTACTTTGCTTGCGGGCCTCATCGCGTGCCCGGTCTGTGCCAGCGCCGCGCACGCAGCCGGTGT GCACTGGACGTATGAGGGCCACGGCGGCCCGCAGGAATGGGGGTCGCTGGAAAGCGGCTTCCAGGCCTGCGCAGTTGGCA GCCAGCAGTCGCCCATCAACCTGGAAGGGGCCGTGCAGGCCGCTGGAGACGGGCCGACGTTGGCCTGGAAGCCCGACGCC TTCAAGATCGTCAACAACGGCCACACCATCCAGGCCGACGTGGTGGGGGATGCGGGAACGGCCACCATGGGCGGCAAGAC CTACACCCTGCGCCAGTTCCACTTCCATGCACCGAGCGAACACGCCCTGAACGGCGAGCGGACCGCCATGGAGGCTCATT TCGTCCATGACGCGCCCGGAGGCGGCCTGCTGGTGGTGGGGGTGTTCATAAAGCCCGGCGCCACCAACGCCGCCTTCTCC GAGGTGATGGCGAGCGCCCCCCGCGCGGAAGGCTCGACCGCGCTCAAGGCTCCGCTCGATGCCACCGGGTTGCTGCCGGC GCAGCGGGCCACCTATCGCTACGAGGGCTCGCTGACCACGCCGCCCTGCTCGGAGGTGGTGGACTGGAACGTGTACGCCA CGCCCATTTCGGTGGCTGAGGCCGACATCGCCGCCTTCCGCGCCATCTTCCCCATGAATGCGCGGCCGCTGCAGGCGGTG AACCGGCGCTTCCTGTTGCGGCTCAATTGA
Upstream 100 bases:
>100_bases ATATGCCGTCGAAATGGCACCAATACCATTTCATCCCTCCTTCTCGTGCTCTAGCTTTCGCACACCGATGGAATTCGGAT GTCATAAAAGGGGAAACGCC
Downstream 100 bases:
>100_bases TACCTGCGGGCGGGTGATATCTGGCGGTCGAGTGACCGGTGGGCGAGCCTGGCTCTCCCGCCGGTCAGGCCCGCGCGGCG TTCGAGCGTATCCCGTTCCG
Product: carbonate dehydratase
Products: NA
Alternate protein names: Carbonate dehydratase [H]
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MAVTRRTLLAGLIACPVCASAAHAAGVHWTYEGHGGPQEWGSLESGFQACAVGSQQSPINLEGAVQAAGDGPTLAWKPDA FKIVNNGHTIQADVVGDAGTATMGGKTYTLRQFHFHAPSEHALNGERTAMEAHFVHDAPGGGLLVVGVFIKPGATNAAFS EVMASAPRAEGSTALKAPLDATGLLPAQRATYRYEGSLTTPPCSEVVDWNVYATPISVAEADIAAFRAIFPMNARPLQAV NRRFLLRLN
Sequences:
>Translated_249_residues MAVTRRTLLAGLIACPVCASAAHAAGVHWTYEGHGGPQEWGSLESGFQACAVGSQQSPINLEGAVQAAGDGPTLAWKPDA FKIVNNGHTIQADVVGDAGTATMGGKTYTLRQFHFHAPSEHALNGERTAMEAHFVHDAPGGGLLVVGVFIKPGATNAAFS EVMASAPRAEGSTALKAPLDATGLLPAQRATYRYEGSLTTPPCSEVVDWNVYATPISVAEADIAAFRAIFPMNARPLQAV NRRFLLRLN >Mature_248_residues AVTRRTLLAGLIACPVCASAAHAAGVHWTYEGHGGPQEWGSLESGFQACAVGSQQSPINLEGAVQAAGDGPTLAWKPDAF KIVNNGHTIQADVVGDAGTATMGGKTYTLRQFHFHAPSEHALNGERTAMEAHFVHDAPGGGLLVVGVFIKPGATNAAFSE VMASAPRAEGSTALKAPLDATGLLPAQRATYRYEGSLTTPPCSEVVDWNVYATPISVAEADIAAFRAIFPMNARPLQAVN RRFLLRLN
Specific function: Reversible hydration of carbon dioxide [H]
COG id: COG3338
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha-carbonic anhydrase family [H]
Homologues:
Organism=Homo sapiens, GI4557395, Length=234, Percent_Identity=32.0512820512821, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI4885101, Length=231, Percent_Identity=34.1991341991342, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI4885099, Length=258, Percent_Identity=31.0077519379845, Blast_Score=101, Evalue=7e-22, Organism=Homo sapiens, GI258679498, Length=246, Percent_Identity=28.8617886178862, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI192447434, Length=246, Percent_Identity=28.8617886178862, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI192447432, Length=246, Percent_Identity=28.8617886178862, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI192447430, Length=246, Percent_Identity=28.8617886178862, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI4502517, Length=246, Percent_Identity=28.8617886178862, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI38348436, Length=230, Percent_Identity=29.5652173913043, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI62240989, Length=176, Percent_Identity=35.2272727272727, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI45935383, Length=257, Percent_Identity=28.4046692607004, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI4502515, Length=257, Percent_Identity=28.4046692607004, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI6912284, Length=266, Percent_Identity=29.3233082706767, Blast_Score=91, Evalue=7e-19, Organism=Homo sapiens, GI4502521, Length=235, Percent_Identity=32.3404255319149, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI6005723, Length=230, Percent_Identity=29.1304347826087, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI4502519, Length=276, Percent_Identity=28.2608695652174, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI70167127, Length=228, Percent_Identity=30.7017543859649, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI169636420, Length=257, Percent_Identity=29.5719844357977, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI194097398, Length=239, Percent_Identity=27.6150627615063, Blast_Score=68, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17568715, Length=257, Percent_Identity=31.9066147859922, Blast_Score=114, Evalue=6e-26, Organism=Caenorhabditis elegans, GI71995280, Length=272, Percent_Identity=27.5735294117647, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17569163, Length=153, Percent_Identity=33.9869281045752, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17569165, Length=153, Percent_Identity=33.9869281045752, Blast_Score=74, Evalue=5e-14, Organism=Drosophila melanogaster, GI21358169, Length=289, Percent_Identity=28.719723183391, Blast_Score=100, Evalue=7e-22, Organism=Drosophila melanogaster, GI17737413, Length=232, Percent_Identity=32.3275862068966, Blast_Score=94, Evalue=9e-20, Organism=Drosophila melanogaster, GI24645604, Length=268, Percent_Identity=27.6119402985075, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI161079350, Length=272, Percent_Identity=27.2058823529412, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24650523, Length=247, Percent_Identity=28.3400809716599, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI116008410, Length=269, Percent_Identity=27.1375464684015, Blast_Score=68, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001148 - InterPro: IPR018338 - InterPro: IPR018340 [H]
Pfam domain/function: PF00194 Carb_anhydrase [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 26088; Mature: 25956
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS51144 ALPHA_CA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTRRTLLAGLIACPVCASAAHAAGVHWTYEGHGGPQEWGSLESGFQACAVGSQQSPIN CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCCCCCCC LEGAVQAAGDGPTLAWKPDAFKIVNNGHTIQADVVGDAGTATMGGKTYTLRQFHFHAPSE CCCEEEECCCCCEEEECCCCEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCC HALNGERTAMEAHFVHDAPGGGLLVVGVFIKPGATNAAFSEVMASAPRAEGSTALKAPLD CCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEECCCC ATGLLPAQRATYRYEGSLTTPPCSEVVDWNVYATPISVAEADIAAFRAIFPMNARPLQAV CCCCCCCCCCEEEECCCCCCCCHHHHCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHH NRRFLLRLN CCEEEEEEC >Mature Secondary Structure AVTRRTLLAGLIACPVCASAAHAAGVHWTYEGHGGPQEWGSLESGFQACAVGSQQSPIN CCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCCCCCCC LEGAVQAAGDGPTLAWKPDAFKIVNNGHTIQADVVGDAGTATMGGKTYTLRQFHFHAPSE CCCEEEECCCCCEEEECCCCEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCC HALNGERTAMEAHFVHDAPGGGLLVVGVFIKPGATNAAFSEVMASAPRAEGSTALKAPLD CCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEECCCC ATGLLPAQRATYRYEGSLTTPPCSEVVDWNVYATPISVAEADIAAFRAIFPMNARPLQAV CCCCCCCCCCEEEECCCCCCCCHHHHCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHH NRRFLLRLN CCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9108244; 7721686; 9761692 [H]