Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154246095
Identifier: 154246095
GI number: 154246095
Start: 2413206
End: 2414234
Strand: Reverse
Name: 154246095
Synonym: Xaut_2152
Alternate gene names: NA
Gene position: 2414234-2413206 (Counterclockwise)
Preceding gene: 154246096
Following gene: 154246094
Centisome position: 45.47
GC content: 66.47
Gene sequence:
>1029_bases ATGCGCCCCACCCTTCCCCGCCTCCTCAAAGCCGGCGCCTTCGCCGCGCTCGCCCTCGCGACGCTTCCCCTCGCCGGCCG GCCGGCCGCGGCGGCGGACGCCATCTGCTACAATTGTCCGCCCGAATGGGCCGACTGGGGCAGCATGCTGAAGGCCATCA AGGCCGACACCGGTATCGACGTGCCGCAGGACAACAAGAATTCCGGCCAGTCCCTCACCCAGATCATCGCCGAGAAGGCG AGCCCGGTGGCGGATGTGGCCTATCTGGGCGTCACCTTCGGCATCAAGGCCAAGGACGCCGGCGTGACCCAGCCCTATGA GCCCAAGGGCTTCGCCGACATCCCGGACGGCCTGAAGGACAAGGATGGCAACTGGTTCACCATCCACTCCGGCACCCTCG GCCTGTTCGTGAACAAGGATGCGCTGGGCGGCGCCCCGGTTCCGGCCTGCTGGGCCGACCTGCTGAAACCGGAATACAAG GGCCTCGTCGGCTATCTCGATCCCACCAGCGCCTTCGTGGGCTATGTGGGCGCGGTGGCGGTGAACGGCGCCATGGGCGG CTCGCTGGACGACTTCAAGCCGGGCATCGAATACTTCAAGAAGCTGCAGGCGAACCAGCCCATCGTGCCGAAGCAGACCT CCTACGCCCGCGTGGTCTCCGGCGAGATCCCGATCCTGTTCGACTATGACTTCAACGCCTACCGCGCCCGCTACTCGGAC ATGGGCCACTTCGAGTTCGTCATCCCGTGCGAGGGCAGCGTGGTGGTGCCCTATGTGATGACCATGGTGAAGGGCGCGCC CCACCCGGAGGCGGCCAAAAAGGTGCTGGACTACGTGCTCTCCGACAAGGGCCAGACCATGTGGGCCAAGGCCTATCTGC GCCCGGCCCGCGACATCAAGCTGCCGCCGGAGGTGGCGAGCCGCTTCCTGCCCGCCGCCGACTATGCCCGCGCCAAGCCG GTGGACTACGCCAAGATGGAATCCGCCCAGAAGGCCTTCTCGGAAGCCTATCTGAACGCGGTGAAGTGA
Upstream 100 bases:
>100_bases CGCCACGCCCCGTGTCGAGCACCTGCCGTTTACGCTCCGCCCCGGCGGAACGCTTGCGTCCAGAGTTTAGAACGCCCCTC TCCTTCTCCCGAGGCCAGCC
Downstream 100 bases:
>100_bases GGGCTACGAGCCGCGGCAAAGCCCTCTCCCGTTTGCGGGGGAGGGAGCCCGACTGTCCTTGCGCCGCCATCACCCCGGCA CTCTCCAACCCGGTCCCACC
Product: putative periplasmic solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MRPTLPRLLKAGAFAALALATLPLAGRPAAAADAICYNCPPEWADWGSMLKAIKADTGIDVPQDNKNSGQSLTQIIAEKA SPVADVAYLGVTFGIKAKDAGVTQPYEPKGFADIPDGLKDKDGNWFTIHSGTLGLFVNKDALGGAPVPACWADLLKPEYK GLVGYLDPTSAFVGYVGAVAVNGAMGGSLDDFKPGIEYFKKLQANQPIVPKQTSYARVVSGEIPILFDYDFNAYRARYSD MGHFEFVIPCEGSVVVPYVMTMVKGAPHPEAAKKVLDYVLSDKGQTMWAKAYLRPARDIKLPPEVASRFLPAADYARAKP VDYAKMESAQKAFSEAYLNAVK
Sequences:
>Translated_342_residues MRPTLPRLLKAGAFAALALATLPLAGRPAAAADAICYNCPPEWADWGSMLKAIKADTGIDVPQDNKNSGQSLTQIIAEKA SPVADVAYLGVTFGIKAKDAGVTQPYEPKGFADIPDGLKDKDGNWFTIHSGTLGLFVNKDALGGAPVPACWADLLKPEYK GLVGYLDPTSAFVGYVGAVAVNGAMGGSLDDFKPGIEYFKKLQANQPIVPKQTSYARVVSGEIPILFDYDFNAYRARYSD MGHFEFVIPCEGSVVVPYVMTMVKGAPHPEAAKKVLDYVLSDKGQTMWAKAYLRPARDIKLPPEVASRFLPAADYARAKP VDYAKMESAQKAFSEAYLNAVK >Mature_342_residues MRPTLPRLLKAGAFAALALATLPLAGRPAAAADAICYNCPPEWADWGSMLKAIKADTGIDVPQDNKNSGQSLTQIIAEKA SPVADVAYLGVTFGIKAKDAGVTQPYEPKGFADIPDGLKDKDGNWFTIHSGTLGLFVNKDALGGAPVPACWADLLKPEYK GLVGYLDPTSAFVGYVGAVAVNGAMGGSLDDFKPGIEYFKKLQANQPIVPKQTSYARVVSGEIPILFDYDFNAYRARYSD MGHFEFVIPCEGSVVVPYVMTMVKGAPHPEAAKKVLDYVLSDKGQTMWAKAYLRPARDIKLPPEVASRFLPAADYARAKP VDYAKMESAQKAFSEAYLNAVK
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 36779; Mature: 36779
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPTLPRLLKAGAFAALALATLPLAGRPAAAADAICYNCPPEWADWGSMLKAIKADTGID CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEECCCCCHHHHHHHHHHHHHCCCCC VPQDNKNSGQSLTQIIAEKASPVADVAYLGVTFGIKAKDAGVTQPYEPKGFADIPDGLKD CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHEECCEECCCCCCCCCCCCCCCCCCCCCCC KDGNWFTIHSGTLGLFVNKDALGGAPVPACWADLLKPEYKGLVGYLDPTSAFVGYVGAVA CCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHCHHHHCEEEECCHHHHHHHHHHHHH VNGAMGGSLDDFKPGIEYFKKLQANQPIVPKQTSYARVVSGEIPILFDYDFNAYRARYSD CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHEEECCCCCEEEECCCHHHHHHHCC MGHFEFVIPCEGSVVVPYVMTMVKGAPHPEAAKKVLDYVLSDKGQTMWAKAYLRPARDIK CCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCC LPPEVASRFLPAADYARAKPVDYAKMESAQKAFSEAYLNAVK CCHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRPTLPRLLKAGAFAALALATLPLAGRPAAAADAICYNCPPEWADWGSMLKAIKADTGID CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEECCCCCHHHHHHHHHHHHHCCCCC VPQDNKNSGQSLTQIIAEKASPVADVAYLGVTFGIKAKDAGVTQPYEPKGFADIPDGLKD CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHEECCEECCCCCCCCCCCCCCCCCCCCCCC KDGNWFTIHSGTLGLFVNKDALGGAPVPACWADLLKPEYKGLVGYLDPTSAFVGYVGAVA CCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHCHHHHCEEEECCHHHHHHHHHHHHH VNGAMGGSLDDFKPGIEYFKKLQANQPIVPKQTSYARVVSGEIPILFDYDFNAYRARYSD CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHEEECCCCCEEEECCCHHHHHHHCC MGHFEFVIPCEGSVVVPYVMTMVKGAPHPEAAKKVLDYVLSDKGQTMWAKAYLRPARDIK CCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCC LPPEVASRFLPAADYARAKPVDYAKMESAQKAFSEAYLNAVK CCHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]