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The map label for this gene is yhiU [C]

Identifier: 154245006

GI number: 154245006

Start: 1211503

End: 1212624

Strand: Reverse

Name: yhiU [C]

Synonym: Xaut_1057

Alternate gene names: 154245006

Gene position: 1212624-1211503 (Counterclockwise)

Preceding gene: 154245007

Following gene: 154245005

Centisome position: 22.84

GC content: 66.04

Gene sequence:

>1122_bases
ATGAAGAAACGGATGATCCTCATGCTGGCCGCCGTCGCCCTGGTTTTCGGGGCGCTATACGGCTTCCAGCTCTTCAAGGC
GAGCATGATCAAGCAGGCGCTGGCCTCGCTGCGCGACCCGCCGCAGACCGTCGCGACCACGGTGGCTGGCCTCACGCCCT
GGCAGTCCACCGTCAAGGCGGTGGGCAGCGTGCGCGCCGAAGCGGGGGCAGACTTGGCGCTCGAGAGCTCCGGCACGGTC
GCGAAGATCAATTTCAAGTCTGGTGACGAGGTGCGCGAGGGGCAGGTCCTCCTTCAACTGCGCGACGAGCAGGAGGTGGC
CAATCTCGCCGCCCTGAAGGCGACTGCGGACGTCAGCGCCATCATCCTCAACCGCGACCAGGAGCAGTTGAAGATCCACG
CGGTGAGCCAGGCAACCATCGACAGCGACACCGCAAACCTCAAGAAGGCGCTGGCCCAGGTGGCCGAGCAGCAGGCGGTG
GTGGACAAGAAGACGCTGAAGGCGCCCTTTTCCGGCCGGCTCGGCATCCGCTCCGTCGATCTCGGCCAGTATGTGAGCGC
GGGCACGGCGGTGGTGACGCTCCAGTCCCTCAACCCCATCTTCATCGACTTCTACCTGCCGCAACAGGCCCTCGCCGAGG
TGAAGACGGGCCAGACGGTGAAGGCCACGGTGGACACCTATCCCGGCCAGGCCTTCGAGGGGACGGTGACGGCCATCAGC
CCCAAGGTGGACGTCACCTCGCGCAACGTGCAACTGCGCGCCGAGTTCAGGAACGACGATCACCGCCTCACCCCCGGCAT
GTTCGCCACTGTCGAGGTCGCTGTGGGAACGCCGGACGCGTTCGTTACCGTGCCGCAGACGGCCGTGACGGCCAATCCGT
ATGGCGACATCGTTTTCGTGGTGGAGAAGAAGGAGGGCTCGGCCACAGGCCTCGCCGCGCGTCAGGTCTTCGTGAAGACG
GGCGCGACGCGGGGCGACCAGATCGCCGTCCTATCAGGCATCAAGGAGGGCGACCAGATCGTCGCCGCCGGGCAGATGAA
GCTGCACAACGGGTCCCAGGTCAGCGTCAACAATACGGTGCTGCCGGCCAACGACCCCGCTCCCTCCATCGTCGATCGCT
GA

Upstream 100 bases:

>100_bases
AACGCCGGCTATTTCCAGGACCACTGAGCGGTACGCACGACCCCTCGCCCCTGCGCCCTCAAAACGCCACCTGCGCCGCA
GCCGCAAGAAGAGACGTCAG

Downstream 100 bases:

>100_bases
ACCGAGGCGCCAGTGTCATCCTTCACCGACATCTTCATCCGCCGGCCGGTGCTGGCGATCGTGGTCAGCCTGATGATCCT
GGTGCTGGGCCTGCGCGCCA

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MKKRMILMLAAVALVFGALYGFQLFKASMIKQALASLRDPPQTVATTVAGLTPWQSTVKAVGSVRAEAGADLALESSGTV
AKINFKSGDEVREGQVLLQLRDEQEVANLAALKATADVSAIILNRDQEQLKIHAVSQATIDSDTANLKKALAQVAEQQAV
VDKKTLKAPFSGRLGIRSVDLGQYVSAGTAVVTLQSLNPIFIDFYLPQQALAEVKTGQTVKATVDTYPGQAFEGTVTAIS
PKVDVTSRNVQLRAEFRNDDHRLTPGMFATVEVAVGTPDAFVTVPQTAVTANPYGDIVFVVEKKEGSATGLAARQVFVKT
GATRGDQIAVLSGIKEGDQIVAAGQMKLHNGSQVSVNNTVLPANDPAPSIVDR

Sequences:

>Translated_373_residues
MKKRMILMLAAVALVFGALYGFQLFKASMIKQALASLRDPPQTVATTVAGLTPWQSTVKAVGSVRAEAGADLALESSGTV
AKINFKSGDEVREGQVLLQLRDEQEVANLAALKATADVSAIILNRDQEQLKIHAVSQATIDSDTANLKKALAQVAEQQAV
VDKKTLKAPFSGRLGIRSVDLGQYVSAGTAVVTLQSLNPIFIDFYLPQQALAEVKTGQTVKATVDTYPGQAFEGTVTAIS
PKVDVTSRNVQLRAEFRNDDHRLTPGMFATVEVAVGTPDAFVTVPQTAVTANPYGDIVFVVEKKEGSATGLAARQVFVKT
GATRGDQIAVLSGIKEGDQIVAAGQMKLHNGSQVSVNNTVLPANDPAPSIVDR
>Mature_373_residues
MKKRMILMLAAVALVFGALYGFQLFKASMIKQALASLRDPPQTVATTVAGLTPWQSTVKAVGSVRAEAGADLALESSGTV
AKINFKSGDEVREGQVLLQLRDEQEVANLAALKATADVSAIILNRDQEQLKIHAVSQATIDSDTANLKKALAQVAEQQAV
VDKKTLKAPFSGRLGIRSVDLGQYVSAGTAVVTLQSLNPIFIDFYLPQQALAEVKTGQTVKATVDTYPGQAFEGTVTAIS
PKVDVTSRNVQLRAEFRNDDHRLTPGMFATVEVAVGTPDAFVTVPQTAVTANPYGDIVFVVEKKEGSATGLAARQVFVKT
GATRGDQIAVLSGIKEGDQIVAAGQMKLHNGSQVSVNNTVLPANDPAPSIVDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1789929, Length=328, Percent_Identity=29.8780487804878, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87082036, Length=301, Percent_Identity=28.2392026578073, Blast_Score=98, Evalue=8e-22,
Organism=Escherichia coli, GI1786668, Length=397, Percent_Identity=29.7229219143577, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1789665, Length=379, Percent_Identity=27.7044854881267, Blast_Score=91, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 39469; Mature: 39469

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRMILMLAAVALVFGALYGFQLFKASMIKQALASLRDPPQTVATTVAGLTPWQSTVKA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHH
VGSVRAEAGADLALESSGTVAKINFKSGDEVREGQVLLQLRDEQEVANLAALKATADVSA
HHHHHHHCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEE
IILNRDQEQLKIHAVSQATIDSDTANLKKALAQVAEQQAVVDKKTLKAPFSGRLGIRSVD
EEECCCHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEC
LGQYVSAGTAVVTLQSLNPIFIDFYLPQQALAEVKTGQTVKATVDTYPGQAFEGTVTAIS
CCHHHCCCEEEEEEECCCCEEEEEECCHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEC
PKVDVTSRNVQLRAEFRNDDHRLTPGMFATVEVAVGTPDAFVTVPQTAVTANPYGDIVFV
CCEEEECCCEEEEEEECCCCCEECCCCEEEEEEEECCCCCEEECCCCEEECCCCCCEEEE
VEKKEGSATGLAARQVFVKTGATRGDQIAVLSGIKEGDQIVAAGQMKLHNGSQVSVNNTV
EECCCCCCCCHHHHEEEEECCCCCCCEEEEEECCCCCCEEEEECEEEECCCCEEEECCEE
LPANDPAPSIVDR
ECCCCCCCHHCCC
>Mature Secondary Structure
MKKRMILMLAAVALVFGALYGFQLFKASMIKQALASLRDPPQTVATTVAGLTPWQSTVKA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHH
VGSVRAEAGADLALESSGTVAKINFKSGDEVREGQVLLQLRDEQEVANLAALKATADVSA
HHHHHHHCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEE
IILNRDQEQLKIHAVSQATIDSDTANLKKALAQVAEQQAVVDKKTLKAPFSGRLGIRSVD
EEECCCHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEC
LGQYVSAGTAVVTLQSLNPIFIDFYLPQQALAEVKTGQTVKATVDTYPGQAFEGTVTAIS
CCHHHCCCEEEEEEECCCCEEEEEECCHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEC
PKVDVTSRNVQLRAEFRNDDHRLTPGMFATVEVAVGTPDAFVTVPQTAVTANPYGDIVFV
CCEEEECCCEEEEEEECCCCCEECCCCEEEEEEEECCCCCEEECCCCEEECCCCCCEEEE
VEKKEGSATGLAARQVFVKTGATRGDQIAVLSGIKEGDQIVAAGQMKLHNGSQVSVNNTV
EECCCCCCCCHHHHEEEEECCCCCCCEEEEEECCCCCCEEEEECEEEECCCCEEEECCEE
LPANDPAPSIVDR
ECCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]