Definition | Clostridium botulinum A str. Hall, complete genome. |
---|---|
Accession | NC_009698 |
Length | 3,760,560 |
Click here to switch to the map view.
The map label for this gene is arcA-2 [H]
Identifier: 153935569
GI number: 153935569
Start: 1688483
End: 1689709
Strand: Direct
Name: arcA-2 [H]
Synonym: CLC_1617
Alternate gene names: 153935569
Gene position: 1688483-1689709 (Clockwise)
Preceding gene: 153934620
Following gene: 153936488
Centisome position: 44.9
GC content: 33.41
Gene sequence:
>1227_bases ATGAGTTCTTTTATTAATGTAACTTCTGAGATAGGAAAGCTTAATAAAGTTATGCTTCATAGACCAGGAGCGGAAATTGA AAATCTAGTTCCTGAATATCTTGAGAGATTACTATTTGATGATATACCTTTTTTAAAAGTGGCGAGGGAAGAGCACGATA GATTTGCACAAATTTTAAGAGAAAACGGAACTGAAGTTTTCTACTTAGAAGAACTTACAGCAGAAACTTTAGAAAATGTT AAAATAAAGAAAGAATTCTTAGAAGAGTTCTTAACAGAAAGTAAAATAACATCTGAAGTAGTAAAAGAAGCTTTAACTGA ATATCTTCTTAATATGTCAACAAGAGAAATGGTTGATACATTAATGGCTGGTGTTAGAAAGAAAGATATCGAAGTTAAAG AAGCTACATCATTAGTAGATTTAATGCAAGATGATTATCCATTCTATCTTGACCCAATGCCAAACCTTTACTTCACAAGA GATCCAGCTGCTTCAATTGGAAGTGGAATGACAATAAATACAATGAGAACAGAAGCAAGAAGAAGAGAAACACTATTCTT AACATACATTCACAAATATCATAAGAATTTTGCTAATGGCGAAACTAGCCTATGGTATAACAGGACTTTACCTTATGCAA TAGAAGGTGGAGACGAACTTGTACTTTCAGATAAAGTTGTAGCTATTGGATGCAGTGCTAGAACATCAGCTGAAGGTATA GAAATAGTAGCTAAAAGCTTATTTGCTAAAAATGAAAGCTTTGAAAAGGTTCTTGTATTTGATATACCAAACTGTAGAGC ATTTATGCATCTTGATACAGTGTTTACAATGGTTGATTATGATAAATTTACGATTCATCCACAAATACAAGGTCCACTTA GTGTTTATGAAGTTACTAAGGGCCCAAATGGAACATTAAGATTTAAACATCATACAGATCCATTAGAAAAAATATTAGCT TCAGCTCTTGAAATTCCATCTGTTGAGTTAATTCAATGTGGCGGAGGAGATTTTGTAATAGCAGGAAGAGAGCAATGGAA TGATGGTTCAAATACACTTGCAATAGCTCCAGGAACTGTTGTAACTTATGAAAGAAACTATGTATCAAATGAACTTTTAG CTAAGAAGGGCATTAATGTTCTTACCATGCCAAGTGCAGAGCTTTCAAGAGGAAGAGGCGGTCCAAGATGCATGAGTATG CCTCTTCATAGAGACAATTTAAGATAA
Upstream 100 bases:
>100_bases ACTAGAAATATCAATTTGAATTAATTATGCATTGAATGTATAATGAATAACAAATGTTAAATAAATAACTAGTACATGAG TACACAGAGGAGGAAAAAAT
Downstream 100 bases:
>100_bases CCCAATTATTTAGATATGTTAACATAATTTATATAATTATGTTAACATAATCTATATAATTTTTCATGAAAATCTATATA ATTTTGTATAATAATCTATA
Product: arginine deiminase
Products: NA
Alternate protein names: ADI; Arginine dihydrolase; AD [H]
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MSSFINVTSEIGKLNKVMLHRPGAEIENLVPEYLERLLFDDIPFLKVAREEHDRFAQILRENGTEVFYLEELTAETLENV KIKKEFLEEFLTESKITSEVVKEALTEYLLNMSTREMVDTLMAGVRKKDIEVKEATSLVDLMQDDYPFYLDPMPNLYFTR DPAASIGSGMTINTMRTEARRRETLFLTYIHKYHKNFANGETSLWYNRTLPYAIEGGDELVLSDKVVAIGCSARTSAEGI EIVAKSLFAKNESFEKVLVFDIPNCRAFMHLDTVFTMVDYDKFTIHPQIQGPLSVYEVTKGPNGTLRFKHHTDPLEKILA SALEIPSVELIQCGGGDFVIAGREQWNDGSNTLAIAPGTVVTYERNYVSNELLAKKGINVLTMPSAELSRGRGGPRCMSM PLHRDNLR
Sequences:
>Translated_408_residues MSSFINVTSEIGKLNKVMLHRPGAEIENLVPEYLERLLFDDIPFLKVAREEHDRFAQILRENGTEVFYLEELTAETLENV KIKKEFLEEFLTESKITSEVVKEALTEYLLNMSTREMVDTLMAGVRKKDIEVKEATSLVDLMQDDYPFYLDPMPNLYFTR DPAASIGSGMTINTMRTEARRRETLFLTYIHKYHKNFANGETSLWYNRTLPYAIEGGDELVLSDKVVAIGCSARTSAEGI EIVAKSLFAKNESFEKVLVFDIPNCRAFMHLDTVFTMVDYDKFTIHPQIQGPLSVYEVTKGPNGTLRFKHHTDPLEKILA SALEIPSVELIQCGGGDFVIAGREQWNDGSNTLAIAPGTVVTYERNYVSNELLAKKGINVLTMPSAELSRGRGGPRCMSM PLHRDNLR >Mature_407_residues SSFINVTSEIGKLNKVMLHRPGAEIENLVPEYLERLLFDDIPFLKVAREEHDRFAQILRENGTEVFYLEELTAETLENVK IKKEFLEEFLTESKITSEVVKEALTEYLLNMSTREMVDTLMAGVRKKDIEVKEATSLVDLMQDDYPFYLDPMPNLYFTRD PAASIGSGMTINTMRTEARRRETLFLTYIHKYHKNFANGETSLWYNRTLPYAIEGGDELVLSDKVVAIGCSARTSAEGIE IVAKSLFAKNESFEKVLVFDIPNCRAFMHLDTVFTMVDYDKFTIHPQIQGPLSVYEVTKGPNGTLRFKHHTDPLEKILAS ALEIPSVELIQCGGGDFVIAGREQWNDGSNTLAIAPGTVVTYERNYVSNELLAKKGINVLTMPSAELSRGRGGPRCMSMP LHRDNLR
Specific function: Unknown
COG id: COG2235
COG function: function code E; Arginine deiminase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginine deiminase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003198 - InterPro: IPR003876 [H]
Pfam domain/function: PF02274 Amidinotransf [H]
EC number: =3.5.3.6 [H]
Molecular weight: Translated: 46200; Mature: 46068
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFINVTSEIGKLNKVMLHRPGAEIENLVPEYLERLLFDDIPFLKVAREEHDRFAQILR CCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ENGTEVFYLEELTAETLENVKIKKEFLEEFLTESKITSEVVKEALTEYLLNMSTREMVDT HCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LMAGVRKKDIEVKEATSLVDLMQDDYPFYLDPMPNLYFTRDPAASIGSGMTINTMRTEAR HHHCCHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCEEECCCHHHHCCCCEEEHHHHHHH RRETLFLTYIHKYHKNFANGETSLWYNRTLPYAIEGGDELVLSDKVVAIGCSARTSAEGI HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCEEEEECCEEEEECCCCCCCHHH EIVAKSLFAKNESFEKVLVFDIPNCRAFMHLDTVFTMVDYDKFTIHPQIQGPLSVYEVTK HHHHHHHHHCCCCCCEEEEEECCCCCEEEEHHHHHHHEECCEEEECCCCCCCEEEEEECC GPNGTLRFKHHTDPLEKILASALEIPSVELIQCGGGDFVIAGREQWNDGSNTLAIAPGTV CCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCEEEECCCEE VTYERNYVSNELLAKKGINVLTMPSAELSRGRGGPRCMSMPLHRDNLR EEEECCHHHHHHHHHCCCCEEEECCHHHHCCCCCCCEEECCCCCCCCC >Mature Secondary Structure SSFINVTSEIGKLNKVMLHRPGAEIENLVPEYLERLLFDDIPFLKVAREEHDRFAQILR CCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ENGTEVFYLEELTAETLENVKIKKEFLEEFLTESKITSEVVKEALTEYLLNMSTREMVDT HCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LMAGVRKKDIEVKEATSLVDLMQDDYPFYLDPMPNLYFTRDPAASIGSGMTINTMRTEAR HHHCCHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCEEECCCHHHHCCCCEEEHHHHHHH RRETLFLTYIHKYHKNFANGETSLWYNRTLPYAIEGGDELVLSDKVVAIGCSARTSAEGI HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCEEEEECCEEEEECCCCCCCHHH EIVAKSLFAKNESFEKVLVFDIPNCRAFMHLDTVFTMVDYDKFTIHPQIQGPLSVYEVTK HHHHHHHHHCCCCCCEEEEEECCCCCEEEEHHHHHHHEECCEEEECCCCCCCEEEEEECC GPNGTLRFKHHTDPLEKILASALEIPSVELIQCGGGDFVIAGREQWNDGSNTLAIAPGTV CCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCEEEECCCEE VTYERNYVSNELLAKKGINVLTMPSAELSRGRGGPRCMSMPLHRDNLR EEEECCHHHHHHHHHCCCCEEEECCHHHHCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA