| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is 153933909
Identifier: 153933909
GI number: 153933909
Start: 2523140
End: 2523415
Strand: Reverse
Name: 153933909
Synonym: CLB_2388
Alternate gene names: NA
Gene position: 2523415-2523140 (Counterclockwise)
Preceding gene: 153931589
Following gene: 153933883
Centisome position: 65.32
GC content: 32.97
Gene sequence:
>276_bases ATGGCAATAAAATTAATAAACATAGGATTTGGTAATATAGTTTCAGCTAATAGATTAGTTGCAATAGTAAGCCCAGAGTC AGCACCTATAAAAAGAATAATACAAGAAGCAAGAGATAGAGGTATGCTTATAGATGCAACTTATGGAAGAAGAACAAGAG CAGTTATAATAACTGATAGTGATCATGTTATTTTATCAGCAGTTCAGCCAGAAACAGTAGCTCATAGATTAGCTTCTAAA GCAGAAGAGGAAGATATAAATGAGGGAGAAGAGTAA
Upstream 100 bases:
>100_bases TACAGACCTTGAAATAGTTAATTTAGTATTAAATATAAAAAATTATATAGAAAAAATTAGAGAGCAAATTCAAAATATAG AATAATTAGGAGGATTTTTA
Downstream 100 bases:
>100_bases TGGCTAAAAAAGGACTTCTTATAGTTATTTCTGGACCATCTGGTGCAGGAAAAGGAACTATATGCAAAGAACTTTTAAAA AAGGAAGACCTATGGGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MAIKLINIGFGNIVSANRLVAIVSPESAPIKRIIQEARDRGMLIDATYGRRTRAVIITDSDHVILSAVQPETVAHRLASK AEEEDINEGEE
Sequences:
>Translated_91_residues MAIKLINIGFGNIVSANRLVAIVSPESAPIKRIIQEARDRGMLIDATYGRRTRAVIITDSDHVILSAVQPETVAHRLASK AEEEDINEGEE >Mature_90_residues AIKLINIGFGNIVSANRLVAIVSPESAPIKRIIQEARDRGMLIDATYGRRTRAVIITDSDHVILSAVQPETVAHRLASKA EEEDINEGEE
Specific function: Unknown
COG id: COG2052
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0296 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1897_CLOBM (B1KX65)
Other databases:
- EMBL: CP000962 - RefSeq: YP_001787830.1 - GeneID: 6151557 - GenomeReviews: CP000962_GR - KEGG: cbl:CLK_1897 - HOGENOM: HBG286498 - OMA: KRIISDA - ProtClustDB: PRK04323 - HAMAP: MF_01503 - InterPro: IPR007169 - ProDom: PD063023
Pfam domain/function: PF04025 DUF370
EC number: NA
Molecular weight: Translated: 9966; Mature: 9834
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKLINIGFGNIVSANRLVAIVSPESAPIKRIIQEARDRGMLIDATYGRRTRAVIITDS CEEEEEECCCCCEECCCEEEEEECCCCCHHHHHHHHHHHCCEEEECCCCCCEEEEEEECC DHVILSAVQPETVAHRLASKAEEEDINEGEE CCEEEEECCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AIKLINIGFGNIVSANRLVAIVSPESAPIKRIIQEARDRGMLIDATYGRRTRAVIITDS EEEEEECCCCCEECCCEEEEEECCCCCHHHHHHHHHHHCCEEEECCCCCCEEEEEEECC DHVILSAVQPETVAHRLASKAEEEDINEGEE CCEEEEECCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA