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The map label for this gene is yloC [H]

Identifier: 153931589

GI number: 153931589

Start: 2523431

End: 2524309

Strand: Reverse

Name: yloC [H]

Synonym: CLB_2389

Alternate gene names: 153931589

Gene position: 2524309-2523431 (Counterclockwise)

Preceding gene: 153932296

Following gene: 153933909

Centisome position: 65.34

GC content: 27.87

Gene sequence:

>879_bases
ATGGTTAAAAGTATGACGGGTTTTGGTAGAGGTTTTTTAGAACAGGATAAAAAAAGTTTTACTGTAGAAATGAAAAGTGT
AAACCATAGATACTGTGATATAAACATAAGAATGCCTAAAGCATTTATGGCTTTAGAAGAAAAAATGAGGGCTACAATAC
AAGAAAAAGTACATAGAGGTAAAATTGATATTTATATCACAGTAAATACATATGATAAAGATGATGTAGAACTTATATAC
AATGAAACCTTATCAGACAATTATTATGAATGCTTAAAAAAGATAAGTGGAAGATATGATGTTAAAAACGACATATCAGT
ATCTTTAATAGGAAGATTTCCAGAAGTAATAACTGTAAAACAAAAAGAAGAGGATTTAGAGGAAGTTTGGAAAAGTTTAA
ATACTCCGCTGAAAGAAGCGGTGGATGCTTTGGTATCCATGAGAGAGAGGGAGGGTAGTAAATTATATAAAGACATAAAT
ATAAAATGTGATGAAATAAAAAAAATGGTTGATAGAATAGAGGAAAAGGCGCCAAAAGTAGTGAATGAATATAATAAAAA
AATTCATGAAAGAGTAAGTGAGCTTTTATCTCAATCAGAAATCGATGAAAGTAGAATAGCTATGGAAGTAGCATTGTTTG
TTGATAAGTCTTCTGTAGATGAAGAAATAGTTAGATTGAACAGTCATATAAATCAAGTATCAGAAACCCTTAATTTAAAA
GAACCTGTAGGAAGAAAATTAGATTTTATAGTTCAAGAGATGAATAGAGAAGCAAATACTATAGCTTCTAAATCTACAGA
CCTTGAAATAGTTAATTTAGTATTAAATATAAAAAATTATATAGAAAAAATTAGAGAGCAAATTCAAAATATAGAATAA

Upstream 100 bases:

>100_bases
GAAAACAGAGTATTTTAAAGTAAAATAGAGATTATGTTGTAAATATCCTTTAGTTTATGTATAATTATCATATCTGGCTG
TTTGTGGAAGGATGGAGAAT

Downstream 100 bases:

>100_bases
TTAGGAGGATTTTTAATGGCAATAAAATTAATAAACATAGGATTTGGTAATATAGTTTCAGCTAATAGATTAGTTGCAAT
AGTAAGCCCAGAGTCAGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MVKSMTGFGRGFLEQDKKSFTVEMKSVNHRYCDINIRMPKAFMALEEKMRATIQEKVHRGKIDIYITVNTYDKDDVELIY
NETLSDNYYECLKKISGRYDVKNDISVSLIGRFPEVITVKQKEEDLEEVWKSLNTPLKEAVDALVSMREREGSKLYKDIN
IKCDEIKKMVDRIEEKAPKVVNEYNKKIHERVSELLSQSEIDESRIAMEVALFVDKSSVDEEIVRLNSHINQVSETLNLK
EPVGRKLDFIVQEMNREANTIASKSTDLEIVNLVLNIKNYIEKIREQIQNIE

Sequences:

>Translated_292_residues
MVKSMTGFGRGFLEQDKKSFTVEMKSVNHRYCDINIRMPKAFMALEEKMRATIQEKVHRGKIDIYITVNTYDKDDVELIY
NETLSDNYYECLKKISGRYDVKNDISVSLIGRFPEVITVKQKEEDLEEVWKSLNTPLKEAVDALVSMREREGSKLYKDIN
IKCDEIKKMVDRIEEKAPKVVNEYNKKIHERVSELLSQSEIDESRIAMEVALFVDKSSVDEEIVRLNSHINQVSETLNLK
EPVGRKLDFIVQEMNREANTIASKSTDLEIVNLVLNIKNYIEKIREQIQNIE
>Mature_292_residues
MVKSMTGFGRGFLEQDKKSFTVEMKSVNHRYCDINIRMPKAFMALEEKMRATIQEKVHRGKIDIYITVNTYDKDDVELIY
NETLSDNYYECLKKISGRYDVKNDISVSLIGRFPEVITVKQKEEDLEEVWKSLNTPLKEAVDALVSMREREGSKLYKDIN
IKCDEIKKMVDRIEEKAPKVVNEYNKKIHERVSELLSQSEIDESRIAMEVALFVDKSSVDEEIVRLNSHINQVSETLNLK
EPVGRKLDFIVQEMNREANTIASKSTDLEIVNLVLNIKNYIEKIREQIQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=292, Percent_Identity=31.5068493150685, Blast_Score=147, Evalue=6e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 34037; Mature: 34037

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSMTGFGRGFLEQDKKSFTVEMKSVNHRYCDINIRMPKAFMALEEKMRATIQEKVHRG
CCCCCCCCCCHHHHHCCHHHEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCC
KIDIYITVNTYDKDDVELIYNETLSDNYYECLKKISGRYDVKNDISVSLIGRFPEVITVK
CEEEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHEEEH
QKEEDLEEVWKSLNTPLKEAVDALVSMREREGSKLYKDINIKCDEIKKMVDRIEEKAPKV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VNEYNKKIHERVSELLSQSEIDESRIAMEVALFVDKSSVDEEIVRLNSHINQVSETLNLK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCH
EPVGRKLDFIVQEMNREANTIASKSTDLEIVNLVLNIKNYIEKIREQIQNIE
HHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKSMTGFGRGFLEQDKKSFTVEMKSVNHRYCDINIRMPKAFMALEEKMRATIQEKVHRG
CCCCCCCCCCHHHHHCCHHHEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCC
KIDIYITVNTYDKDDVELIYNETLSDNYYECLKKISGRYDVKNDISVSLIGRFPEVITVK
CEEEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHEEEH
QKEEDLEEVWKSLNTPLKEAVDALVSMREREGSKLYKDINIKCDEIKKMVDRIEEKAPKV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VNEYNKKIHERVSELLSQSEIDESRIAMEVALFVDKSSVDEEIVRLNSHINQVSETLNLK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCH
EPVGRKLDFIVQEMNREANTIASKSTDLEIVNLVLNIKNYIEKIREQIQNIE
HHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]