| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
Click here to switch to the map view.
The map label for this gene is gmk [H]
Identifier: 153933883
GI number: 153933883
Start: 2522511
End: 2523140
Strand: Reverse
Name: gmk [H]
Synonym: CLB_2387
Alternate gene names: 153933883
Gene position: 2523140-2522511 (Counterclockwise)
Preceding gene: 153933909
Following gene: 153933120
Centisome position: 65.31
GC content: 28.73
Gene sequence:
>630_bases ATGGCTAAAAAAGGACTTCTTATAGTTATTTCTGGACCATCTGGTGCAGGAAAAGGAACTATATGCAAAGAACTTTTAAA AAAGGAAGACCTATGGGTATCAGTTTCTGCCACCACTAGATCTCCAAGAAAGGGAGAGGAAAATGGAGTACATTATTTTT TCTTAAATAAAGATGAATTTAATGAAAGAATAGAGAAAGATGATTTTTTAGAATATGCTAAAGTTCATCAAAATTTATAT GGAACTCCTAAATCTAGTGTTTTAGAAAAGATTAATAATGGTAATAATGTAATATTAGAGATAGATATTCAAGGAGCTTT AAAAGTAAAAGAAACTTATCCAGAAGGAATATTTATATTTATATTGCCTCCTTCTATGGAAGAATTAAAAAATAGAATAA TAAATAGAGGCAGTGAAACAGCAGAAACTTTAATGATAAGATTTAAAGCTGCTTACAAAGAAATAAATTATGTATCAAAA TATAATTATGCAGTAGTAAATGATACAGTGGAGGACGCAGTTAATAAGGTAAGAAGTATTATATTAGCGGAAAGCTGTAG AGTTGATAGAATGAAGGATACAATATTAGCATCAAAGGAGGAATTTATTCATGAGCAATTCTATGATTAA
Upstream 100 bases:
>100_bases ATAGTGATCATGTTATTTTATCAGCAGTTCAGCCAGAAACAGTAGCTCATAGATTAGCTTCTAAAGCAGAAGAGGAAGAT ATAAATGAGGGAGAAGAGTA
Downstream 100 bases:
>100_bases TCCATCAATAGTAAATTTATTAGAAAAGGTTGATGACAGATACTCATTAGTAACTATAACATCTAAAAGATCAAGGCAAT TAATAGATGGAGCAAAACCA
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MAKKGLLIVISGPSGAGKGTICKELLKKEDLWVSVSATTRSPRKGEENGVHYFFLNKDEFNERIEKDDFLEYAKVHQNLY GTPKSSVLEKINNGNNVILEIDIQGALKVKETYPEGIFIFILPPSMEELKNRIINRGSETAETLMIRFKAAYKEINYVSK YNYAVVNDTVEDAVNKVRSIILAESCRVDRMKDTILASKEEFIHEQFYD
Sequences:
>Translated_209_residues MAKKGLLIVISGPSGAGKGTICKELLKKEDLWVSVSATTRSPRKGEENGVHYFFLNKDEFNERIEKDDFLEYAKVHQNLY GTPKSSVLEKINNGNNVILEIDIQGALKVKETYPEGIFIFILPPSMEELKNRIINRGSETAETLMIRFKAAYKEINYVSK YNYAVVNDTVEDAVNKVRSIILAESCRVDRMKDTILASKEEFIHEQFYD >Mature_208_residues AKKGLLIVISGPSGAGKGTICKELLKKEDLWVSVSATTRSPRKGEENGVHYFFLNKDEFNERIEKDDFLEYAKVHQNLYG TPKSSVLEKINNGNNVILEIDIQGALKVKETYPEGIFIFILPPSMEELKNRIINRGSETAETLMIRFKAAYKEINYVSKY NYAVVNDTVEDAVNKVRSIILAESCRVDRMKDTILASKEEFIHEQFYD
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874831, Length=189, Percent_Identity=35.4497354497354, Blast_Score=122, Evalue=3e-28, Organism=Homo sapiens, GI226874833, Length=189, Percent_Identity=35.4497354497354, Blast_Score=122, Evalue=3e-28, Organism=Homo sapiens, GI4504221, Length=189, Percent_Identity=35.4497354497354, Blast_Score=122, Evalue=3e-28, Organism=Homo sapiens, GI38570142, Length=184, Percent_Identity=29.8913043478261, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI262118255, Length=174, Percent_Identity=28.1609195402299, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI4505237, Length=174, Percent_Identity=28.1609195402299, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI262118259, Length=174, Percent_Identity=28.1609195402299, Blast_Score=70, Evalue=9e-13, Organism=Homo sapiens, GI262118263, Length=174, Percent_Identity=28.1609195402299, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI14780902, Length=190, Percent_Identity=28.4210526315789, Blast_Score=67, Evalue=8e-12, Organism=Homo sapiens, GI21361598, Length=186, Percent_Identity=26.3440860215054, Blast_Score=65, Evalue=3e-11, Organism=Escherichia coli, GI1790080, Length=192, Percent_Identity=43.2291666666667, Blast_Score=172, Evalue=2e-44, Organism=Caenorhabditis elegans, GI193203132, Length=172, Percent_Identity=39.5348837209302, Blast_Score=126, Evalue=7e-30, Organism=Caenorhabditis elegans, GI17508835, Length=172, Percent_Identity=39.5348837209302, Blast_Score=126, Evalue=8e-30, Organism=Caenorhabditis elegans, GI17557440, Length=182, Percent_Identity=27.4725274725275, Blast_Score=68, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71984092, Length=183, Percent_Identity=29.5081967213115, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320662, Length=183, Percent_Identity=42.0765027322404, Blast_Score=136, Evalue=2e-33, Organism=Drosophila melanogaster, GI21356141, Length=182, Percent_Identity=39.010989010989, Blast_Score=124, Evalue=3e-29, Organism=Drosophila melanogaster, GI45551002, Length=135, Percent_Identity=34.0740740740741, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI85816281, Length=129, Percent_Identity=34.8837209302326, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI85816106, Length=129, Percent_Identity=34.8837209302326, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 23821; Mature: 23689
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKGLLIVISGPSGAGKGTICKELLKKEDLWVSVSATTRSPRKGEENGVHYFFLNKDEF CCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEECHHHH NERIEKDDFLEYAKVHQNLYGTPKSSVLEKINNGNNVILEIDIQGALKVKETYPEGIFIF HHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEECCCEEEEEECCCCCEEEE ILPPSMEELKNRIINRGSETAETLMIRFKAAYKEINYVSKYNYAVVNDTVEDAVNKVRSI EECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHH ILAESCRVDRMKDTILASKEEFIHEQFYD HHHHHCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKKGLLIVISGPSGAGKGTICKELLKKEDLWVSVSATTRSPRKGEENGVHYFFLNKDEF CCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEECHHHH NERIEKDDFLEYAKVHQNLYGTPKSSVLEKINNGNNVILEIDIQGALKVKETYPEGIFIF HHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEECCCEEEEEECCCCCEEEE ILPPSMEELKNRIINRGSETAETLMIRFKAAYKEINYVSKYNYAVVNDTVEDAVNKVRSI EECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHH ILAESCRVDRMKDTILASKEEFIHEQFYD HHHHHCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]