Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
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Accession | NC_009697 |
Length | 3,863,450 |
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The map label for this gene is 153932756
Identifier: 153932756
GI number: 153932756
Start: 2574717
End: 2575901
Strand: Reverse
Name: 153932756
Synonym: CLB_2448
Alternate gene names: NA
Gene position: 2575901-2574717 (Counterclockwise)
Preceding gene: 153933057
Following gene: 153932099
Centisome position: 66.67
GC content: 29.28
Gene sequence:
>1185_bases TTGGGAATATGGAATAAGATAAAAAGTTTAATTAAAGCACCATTCAAAACTAATATTGTAAGAGATTATAGAGAAGGTTT TAGCTTTTTTAATACTGACTTAGCAACAAATGAAACTATATTCTCAGCAGTGTCATTATTAAGTAATACAATGGGTAGTT TGCCTCTTAAACTTTATAAAAATTATGAAATAACTAAACCAGAAGATAATGATTTATCTAGAATGATAGAATACAACCCT ACTTCATATATGACTATGCTACAGTGGGTTAGATGTATGGAAACTTTAAAAAATACTAAGGGCAACTCATATGCTATAAA AGAATATGATTATATGCATCAACCTATAAAAATGCATATTTTAAACCCTGATTTCGTTACTCCTATAATAGAAAAAGGTA CTAAGGAACTTTGGTATGAGATTAGGGATGAAGATGCTTTAATGTATGTGCATAATTCTCATATAATACATTTTAGCCAC ATTTCTGTTAATGGCTATAAAGGTATTAACCCATTAGATGTTTTAAGGAATACCATAGATTATGACAGAGAAATTAAAGA ATTTAGTTTAAATCAGATGAAAAATGGATTAAAGGCAAATATAGTTATTAAATTAGCAGCTAAATTAAACAAAGATGCTA TGAATGAGTATACAGAGATGATAGGAAGGTTTCAAAAGAATGGAATTTTATTTGTAGACCAGGGCAAAGAATTTCAAGAG TTAAAGAATAGTTCATTTATAGATCCTAAAGTTTTCGATGTAGAAAATATAACTATTGCTAGGGTAGCCAGGGTATATAA TATACCACTCCATAAACTTTTAGCTGAAAAACAAGGTTATTCTAGTGCTGAACAAGCAGATTTGGAATATATAAAAGATA CTATTTTACCTGTTATAAGGCAGTATGAAGAAGAATTAAATAAAAAATTGCTTACAGAACAACAAAGAAACGAGGGATAC TCCTTTAAGTTTAATCTGAATGGTTTAGCCAGGGCAGATATGAAAACTAGAGGAGATTTTTATTTTAAAGGTATTAGGAG TGCTTGGTTTACACCTAATGAAATAAGAGCTTTGGAAGAAATGCAACCGATAAAAGGTGGAGATCAATTATTTGTATCAA GGGATTTGATTCCGATAGATAAAATTGATTTATTACTGAAAGGGGGTGAAAAGAATGGCAAATAA
Upstream 100 bases:
>100_bases AGCTGCAGTAATAAATGCACATGTAAGAGGAATGGTTATATTAGATGATGGATCAGGAGATATATTTTATAGTCCAGATA TATAGGAGGGAGGTGGAAAA
Downstream 100 bases:
>100_bases GAAATTTTGGGAGGTTAAAAACTCAACAGAAAATGAAAACATAGGAGAAGCGTATATCTATGGTGATATAGTGTCTTATA AATGGGATGATACTGATACA
Product: HK97 family phage portal protein
Products: NA
Alternate protein names: HK97 Family Phage Portal Protein; Portal Protein; Head Portal Protein; HK97 Family Portal Protein; Phage-Related Head Portal Protein; Phage Portal Protein HK; Phage Capsid Protein HK; Phage Portal; Prophage; Phage-Like Protein; Bacteriophage Portal Protein; HK97 Family Portal Protein ; Phage Related Head Portal Protein; Phage-Related Portal Protein; Protein RF
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MGIWNKIKSLIKAPFKTNIVRDYREGFSFFNTDLATNETIFSAVSLLSNTMGSLPLKLYKNYEITKPEDNDLSRMIEYNP TSYMTMLQWVRCMETLKNTKGNSYAIKEYDYMHQPIKMHILNPDFVTPIIEKGTKELWYEIRDEDALMYVHNSHIIHFSH ISVNGYKGINPLDVLRNTIDYDREIKEFSLNQMKNGLKANIVIKLAAKLNKDAMNEYTEMIGRFQKNGILFVDQGKEFQE LKNSSFIDPKVFDVENITIARVARVYNIPLHKLLAEKQGYSSAEQADLEYIKDTILPVIRQYEEELNKKLLTEQQRNEGY SFKFNLNGLARADMKTRGDFYFKGIRSAWFTPNEIRALEEMQPIKGGDQLFVSRDLIPIDKIDLLLKGGEKNGK
Sequences:
>Translated_394_residues MGIWNKIKSLIKAPFKTNIVRDYREGFSFFNTDLATNETIFSAVSLLSNTMGSLPLKLYKNYEITKPEDNDLSRMIEYNP TSYMTMLQWVRCMETLKNTKGNSYAIKEYDYMHQPIKMHILNPDFVTPIIEKGTKELWYEIRDEDALMYVHNSHIIHFSH ISVNGYKGINPLDVLRNTIDYDREIKEFSLNQMKNGLKANIVIKLAAKLNKDAMNEYTEMIGRFQKNGILFVDQGKEFQE LKNSSFIDPKVFDVENITIARVARVYNIPLHKLLAEKQGYSSAEQADLEYIKDTILPVIRQYEEELNKKLLTEQQRNEGY SFKFNLNGLARADMKTRGDFYFKGIRSAWFTPNEIRALEEMQPIKGGDQLFVSRDLIPIDKIDLLLKGGEKNGK >Mature_393_residues GIWNKIKSLIKAPFKTNIVRDYREGFSFFNTDLATNETIFSAVSLLSNTMGSLPLKLYKNYEITKPEDNDLSRMIEYNPT SYMTMLQWVRCMETLKNTKGNSYAIKEYDYMHQPIKMHILNPDFVTPIIEKGTKELWYEIRDEDALMYVHNSHIIHFSHI SVNGYKGINPLDVLRNTIDYDREIKEFSLNQMKNGLKANIVIKLAAKLNKDAMNEYTEMIGRFQKNGILFVDQGKEFQEL KNSSFIDPKVFDVENITIARVARVYNIPLHKLLAEKQGYSSAEQADLEYIKDTILPVIRQYEEELNKKLLTEQQRNEGYS FKFNLNGLARADMKTRGDFYFKGIRSAWFTPNEIRALEEMQPIKGGDQLFVSRDLIPIDKIDLLLKGGEKNGK
Specific function: Unknown
COG id: COG4695
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45814; Mature: 45683
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIWNKIKSLIKAPFKTNIVRDYREGFSFFNTDLATNETIFSAVSLLSNTMGSLPLKLYK CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHC NYEITKPEDNDLSRMIEYNPTSYMTMLQWVRCMETLKNTKGNSYAIKEYDYMHQPIKMHI CCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHCCCEEEEE LNPDFVTPIIEKGTKELWYEIRDEDALMYVHNSHIIHFSHISVNGYKGINPLDVLRNTID ECCHHHHHHHHCCCHHHHHEECCCCEEEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHH YDREIKEFSLNQMKNGLKANIVIKLAAKLNKDAMNEYTEMIGRFQKNGILFVDQGKEFQE HHHHHHHHHHHHHHCCCCEEEEEEEHHHHCHHHHHHHHHHHHHHHHCCEEEEECCCHHHH LKNSSFIDPKVFDVENITIARVARVYNIPLHKLLAEKQGYSSAEQADLEYIKDTILPVIR HCCCCCCCCCEECCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH QYEEELNKKLLTEQQRNEGYSFKFNLNGLARADMKTRGDFYFKGIRSAWFTPNEIRALEE HHHHHHHHHHHHHHHHCCCCEEEEECCCCEECCHHHCCCHHHHHHHHHCCCHHHHHHHHH MQPIKGGDQLFVSRDLIPIDKIDLLLKGGEKNGK HCCCCCCCEEEEECCCCCCCHHHHEEECCCCCCC >Mature Secondary Structure GIWNKIKSLIKAPFKTNIVRDYREGFSFFNTDLATNETIFSAVSLLSNTMGSLPLKLYK CHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHC NYEITKPEDNDLSRMIEYNPTSYMTMLQWVRCMETLKNTKGNSYAIKEYDYMHQPIKMHI CCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHCCCEEEEE LNPDFVTPIIEKGTKELWYEIRDEDALMYVHNSHIIHFSHISVNGYKGINPLDVLRNTID ECCHHHHHHHHCCCHHHHHEECCCCEEEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHH YDREIKEFSLNQMKNGLKANIVIKLAAKLNKDAMNEYTEMIGRFQKNGILFVDQGKEFQE HHHHHHHHHHHHHHCCCCEEEEEEEHHHHCHHHHHHHHHHHHHHHHCCEEEEECCCHHHH LKNSSFIDPKVFDVENITIARVARVYNIPLHKLLAEKQGYSSAEQADLEYIKDTILPVIR HCCCCCCCCCEECCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH QYEEELNKKLLTEQQRNEGYSFKFNLNGLARADMKTRGDFYFKGIRSAWFTPNEIRALEE HHHHHHHHHHHHHHHHCCCCEEEEECCCCEECCHHHCCCHHHHHHHHHCCCHHHHHHHHH MQPIKGGDQLFVSRDLIPIDKIDLLLKGGEKNGK HCCCCCCCEEEEECCCCCCCHHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA