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The map label for this gene is ymfN [H]

Identifier: 153933057

GI number: 153933057

Start: 2575917

End: 2577617

Strand: Reverse

Name: ymfN [H]

Synonym: CLB_2449

Alternate gene names: 153933057

Gene position: 2577617-2575917 (Counterclockwise)

Preceding gene: 153930800

Following gene: 153932756

Centisome position: 66.72

GC content: 31.22

Gene sequence:

>1701_bases
GTGAGTGAGTTTGCTCAACTATTTACTAGAATTTATAATTATTCTTTAGATATTGTAGAGAAAAAAATAAAAGCTTGTAA
AAAACATAGGCAAGCTTGCCAAAGGTTCCTGGATGATTTAGAAAAAAGTAAAGAGGACGATTATCCTTTTTATTTTGATT
ATGAGGAACTTTATAACTTTTTTAAATGGTCTGGTATGTTTAAACATAGAGTTGGAATTCTTAAAGGTCAAAATATTGAT
CTTGTAGATTTTCAACTCTTTTTAATTGGGAACATATTTTGTTGGAAAGAGAAAGAAACAGGCTATAGAAGGTTTAGAAA
AGTATATATTCAGCTTGCTAGAAAAAATGCAAAATCTCAATTGTTAGCATTAATAACTAGTTATGAGTGTTTCTTATCTG
ATGAACAACAGGAATGTTATATAAGTGGTTGGACTAAAAAACAATCTAAGATAGTTTACAAAGAAATGAAATTCCAACTA
GAGGGTAATGACTTTTTAAAAGGTAAATGGAAAGAAAGTTATGGGGTTATTACACACTTAAGGAGTGGTTCTATTATAGA
ACCTTTATCCAAGGAAGCTAAAAATAATGGTGACGGCGATAACCCAAGCTTGGGAATATGTGACGAATATCATCAACATA
AAACAGATGAAATATATGAATCTATTCTTTCTGGTATGGGCGCTAGAACAGAGCCACTTATGGTTATTATAACTACTGCA
GGAGTGGATTTAAATAGTCCTTGTTATAAGGAATATCAATATGTTAGTAAAATACTTGATCCTAACTTAAAAGATATTAC
GAATGATGAATATTTTGTAATGATTTGTGAACTAGATTCTAAAGATGATATAAAAGATGAAAGTAATTGGATTAAAGCAA
ATCCTATTTTAGCCACATATCCTTTAGGTTTAAGAAAAATAAGAAGTGAATTAAAAGCAGCGCTTGATGCTCCTGAAAAG
ATGACTAAGTTTAAAACTAAGTATATGGATATTTGGGTAAATGCTAGAGAAAATGGCTACATGAACATGACAAAGTGGTC
TGAATGTGAAAATAACAAATTATCTTTAGCAGATTTTGAAGGTGAGGAGTGTGTTGGAGGCTTAGACTTATCAACTAAGC
TTGATTTGACTTCTATAGCTTTTGAATTTAAAAGGAATGGCAAGTATTATCCATTTCAGCACTCTTTTATACCACAGGAA
GCCTATGATAGAAGATTAAACGAAGGTAAATATCCTTTTGATTTATGGAAAGAGCAAGGACATTTAACTGTAACACCAGG
AGCAGTAATAGATTATGCTTTTGTTAAACAATGGATACAAGAACAGGAACAAAAATATAATTTAAAAATTAAAGAGATAG
GGTATGACCCATACAATGCTACACAATTTGTACAGGAAATGGAGCAGGAAGGTTATGTGATGGTTGAAGTTAGACAAGGA
CCATTTACATTAAATGAACCTACTAAAGATTTTAGGGACCAGATATATGATAAAAAGTTAGAGCATAGTGGTGATGGACT
TTTAACATGGGCAATAGGAAATGCGGTAACTAAACAAAATGCACAGGAATTTATAATGCTAGATAAAGCAAAATCCAGTG
AAAAAATAGACCCTGCAGCTGCAGTAATAAATGCACATGTAAGAGGAATGGTTATATTAGATGATGGATCAGGAGATATA
TTTTATAGTCCAGATATATAG

Upstream 100 bases:

>100_bases
ATTTGGGATTAACTATAAGTAGTAGGTGCAAGTTAGTTGTACCTAAAAAAGAGGACAAGAAGGAGCTAACAGAAGAGGAA
AAACTTTTCGGTGGTAAAGT

Downstream 100 bases:

>100_bases
GAGGGAGGTGGAAAATTGGGAATATGGAATAAGATAAAAAGTTTAATTAAAGCACCATTCAAAACTAATATTGTAAGAGA
TTATAGAGAAGGTTTTAGCT

Product: putative phage terminase, large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 565

Protein sequence:

>566_residues
MSEFAQLFTRIYNYSLDIVEKKIKACKKHRQACQRFLDDLEKSKEDDYPFYFDYEELYNFFKWSGMFKHRVGILKGQNID
LVDFQLFLIGNIFCWKEKETGYRRFRKVYIQLARKNAKSQLLALITSYECFLSDEQQECYISGWTKKQSKIVYKEMKFQL
EGNDFLKGKWKESYGVITHLRSGSIIEPLSKEAKNNGDGDNPSLGICDEYHQHKTDEIYESILSGMGARTEPLMVIITTA
GVDLNSPCYKEYQYVSKILDPNLKDITNDEYFVMICELDSKDDIKDESNWIKANPILATYPLGLRKIRSELKAALDAPEK
MTKFKTKYMDIWVNARENGYMNMTKWSECENNKLSLADFEGEECVGGLDLSTKLDLTSIAFEFKRNGKYYPFQHSFIPQE
AYDRRLNEGKYPFDLWKEQGHLTVTPGAVIDYAFVKQWIQEQEQKYNLKIKEIGYDPYNATQFVQEMEQEGYVMVEVRQG
PFTLNEPTKDFRDQIYDKKLEHSGDGLLTWAIGNAVTKQNAQEFIMLDKAKSSEKIDPAAAVINAHVRGMVILDDGSGDI
FYSPDI

Sequences:

>Translated_566_residues
MSEFAQLFTRIYNYSLDIVEKKIKACKKHRQACQRFLDDLEKSKEDDYPFYFDYEELYNFFKWSGMFKHRVGILKGQNID
LVDFQLFLIGNIFCWKEKETGYRRFRKVYIQLARKNAKSQLLALITSYECFLSDEQQECYISGWTKKQSKIVYKEMKFQL
EGNDFLKGKWKESYGVITHLRSGSIIEPLSKEAKNNGDGDNPSLGICDEYHQHKTDEIYESILSGMGARTEPLMVIITTA
GVDLNSPCYKEYQYVSKILDPNLKDITNDEYFVMICELDSKDDIKDESNWIKANPILATYPLGLRKIRSELKAALDAPEK
MTKFKTKYMDIWVNARENGYMNMTKWSECENNKLSLADFEGEECVGGLDLSTKLDLTSIAFEFKRNGKYYPFQHSFIPQE
AYDRRLNEGKYPFDLWKEQGHLTVTPGAVIDYAFVKQWIQEQEQKYNLKIKEIGYDPYNATQFVQEMEQEGYVMVEVRQG
PFTLNEPTKDFRDQIYDKKLEHSGDGLLTWAIGNAVTKQNAQEFIMLDKAKSSEKIDPAAAVINAHVRGMVILDDGSGDI
FYSPDI
>Mature_565_residues
SEFAQLFTRIYNYSLDIVEKKIKACKKHRQACQRFLDDLEKSKEDDYPFYFDYEELYNFFKWSGMFKHRVGILKGQNIDL
VDFQLFLIGNIFCWKEKETGYRRFRKVYIQLARKNAKSQLLALITSYECFLSDEQQECYISGWTKKQSKIVYKEMKFQLE
GNDFLKGKWKESYGVITHLRSGSIIEPLSKEAKNNGDGDNPSLGICDEYHQHKTDEIYESILSGMGARTEPLMVIITTAG
VDLNSPCYKEYQYVSKILDPNLKDITNDEYFVMICELDSKDDIKDESNWIKANPILATYPLGLRKIRSELKAALDAPEKM
TKFKTKYMDIWVNARENGYMNMTKWSECENNKLSLADFEGEECVGGLDLSTKLDLTSIAFEFKRNGKYYPFQHSFIPQEA
YDRRLNEGKYPFDLWKEQGHLTVTPGAVIDYAFVKQWIQEQEQKYNLKIKEIGYDPYNATQFVQEMEQEGYVMVEVRQGP
FTLNEPTKDFRDQIYDKKLEHSGDGLLTWAIGNAVTKQNAQEFIMLDKAKSSEKIDPAAAVINAHVRGMVILDDGSGDIF
YSPDI

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage terminase family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR005021
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF03354 Terminase_1 [H]

EC number: NA

Molecular weight: Translated: 65844; Mature: 65713

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEFAQLFTRIYNYSLDIVEKKIKACKKHRQACQRFLDDLEKSKEDDYPFYFDYEELYNF
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHH
FKWSGMFKHRVGILKGQNIDLVDFQLFLIGNIFCWKEKETGYRRFRKVYIQLARKNAKSQ
HHHCCHHHHHHHEECCCCCCEEEEEHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
LLALITSYECFLSDEQQECYISGWTKKQSKIVYKEMKFQLEGNDFLKGKWKESYGVITHL
HHHHHHHHHHHCCCCCCCEEEECCCCHHHHHEEEEEEEEECCCCEECCCCCCCCCEEEEE
RSGSIIEPLSKEAKNNGDGDNPSLGICDEYHQHKTDEIYESILSGMGARTEPLMVIITTA
CCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEEC
GVDLNSPCYKEYQYVSKILDPNLKDITNDEYFVMICELDSKDDIKDESNWIKANPILATY
CCCCCCCHHHHHHHHHHHHCCCHHHCCCCCEEEEEEECCCCCCCCCCCCEEEECCEEEEC
PLGLRKIRSELKAALDAPEKMTKFKTKYMDIWVNARENGYMNMTKWSECENNKLSLADFE
CHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEEECCCCCCEECCCCCCCCCCCEEEEECC
GEECVGGLDLSTKLDLTSIAFEFKRNGKYYPFQHSFIPQEAYDRRLNEGKYPFDLWKEQG
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHCCC
HLTVTPGAVIDYAFVKQWIQEQEQKYNLKIKEIGYDPYNATQFVQEMEQEGYVMVEVRQG
CEEECCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHCCEEEEEEECC
PFTLNEPTKDFRDQIYDKKLEHSGDGLLTWAIGNAVTKQNAQEFIMLDKAKSSEKIDPAA
CEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCHHEEEEECCCCCCCCCHHH
AVINAHVRGMVILDDGSGDIFYSPDI
HHHHHCEEEEEEEECCCCCEEECCCC
>Mature Secondary Structure 
SEFAQLFTRIYNYSLDIVEKKIKACKKHRQACQRFLDDLEKSKEDDYPFYFDYEELYNF
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHH
FKWSGMFKHRVGILKGQNIDLVDFQLFLIGNIFCWKEKETGYRRFRKVYIQLARKNAKSQ
HHHCCHHHHHHHEECCCCCCEEEEEHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
LLALITSYECFLSDEQQECYISGWTKKQSKIVYKEMKFQLEGNDFLKGKWKESYGVITHL
HHHHHHHHHHHCCCCCCCEEEECCCCHHHHHEEEEEEEEECCCCEECCCCCCCCCEEEEE
RSGSIIEPLSKEAKNNGDGDNPSLGICDEYHQHKTDEIYESILSGMGARTEPLMVIITTA
CCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEEC
GVDLNSPCYKEYQYVSKILDPNLKDITNDEYFVMICELDSKDDIKDESNWIKANPILATY
CCCCCCCHHHHHHHHHHHHCCCHHHCCCCCEEEEEEECCCCCCCCCCCCEEEECCEEEEC
PLGLRKIRSELKAALDAPEKMTKFKTKYMDIWVNARENGYMNMTKWSECENNKLSLADFE
CHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEEECCCCCCEECCCCCCCCCCCEEEEECC
GEECVGGLDLSTKLDLTSIAFEFKRNGKYYPFQHSFIPQEAYDRRLNEGKYPFDLWKEQG
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHCCC
HLTVTPGAVIDYAFVKQWIQEQEQKYNLKIKEIGYDPYNATQFVQEMEQEGYVMVEVRQG
CEEECCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHCCEEEEEEECC
PFTLNEPTKDFRDQIYDKKLEHSGDGLLTWAIGNAVTKQNAQEFIMLDKAKSSEKIDPAA
CEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCHHEEEEECCCCCCCCCHHH
AVINAHVRGMVILDDGSGDIFYSPDI
HHHHHCEEEEEEEECCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]