| Definition | Bacillus cereus subsp. cytotoxis NVH 391-98, complete genome. |
|---|---|
| Accession | NC_009674 |
| Length | 4,087,024 |
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The map label for this gene is recJ [H]
Identifier: 152976827
GI number: 152976827
Start: 3171017
End: 3173356
Strand: Reverse
Name: recJ [H]
Synonym: Bcer98_3125
Alternate gene names: 152976827
Gene position: 3173356-3171017 (Counterclockwise)
Preceding gene: 152976828
Following gene: 152976826
Centisome position: 77.64
GC content: 38.03
Gene sequence:
>2340_bases GTGTTACAACCGAAAACGCGTTGGAAAGAAAAAACATATAATGAAGAACTGGTGAGGGAATTAGCAAGTAAATTGCAATT ATCACCACTTGTTGTTTCTTTATTCCTCGGTAGAGGTTTAGATACAGAAGATAAGATTATGGATTTTTTTAATACAGCAG AGCAAGAATTTCATGATCCATTTTTATTAGAAGGCATGGATCGGACAGTAGAGCGTGTGAAACAGGCGATCCAAAATGGA GAGCAGATTTTAATATTTGGTGACTATGATGCAGACGGAGTCAGTAGTACGACCGTACTATTTTTAGCGCTTCAAGAATT AGGAGCAGATGTGGAATTTTATATTCCAAACCGTTTTACGGAAGGATATGGACCAAATGAAGAGGCGTTTCGTTGGGCGC ACCAAGCCGGTTTTTCTTTAATTATTACGGTTGATACAGGAATAGCAGCAGTACATGAGGCGCAAGTGGCAAAAGAGCTT GGAATTGATTTAATTATTACAGATCATCATGAGCCACCGCCAGAACTGCCAGAAGCACTTGCGATTATTCATCCGAAGCT TGAGGGTGGTGTATATCCGTTTCACTATTTAGCAGGGGTTGGTGTTGCTTTTAAAGTAGCGCATGCGTTGCTAGGGCGTG TTCCGGAGCATTTGCTAGAAATTGCTGTTATTGGTACAGTAGCTGACTTAGTATCACTTCATGGTGAGAATAGATTAATT GTACAGCGCGGATTAAAACATATGAGAATGACAAAAAACATCGGCTTAAAAGCACTTTTTAAAGTGGCGAATGTCTCGCA AAGTGAAATTACAGAAGAAAGTATTGGTTTTTTGTTGGCGCCTCGTATTAATGCGGTTGGACGTTTAGAAGATGCTGCTC CGGCAGTTCATCTTCTGCTATCAGAAGATCCAGAAGAAGCAAAAGAGCTGGCAGAAGAAATTGATGAATTAAACAAACTA CGAAAAGATATTGTGAAACAAATTACCGAGGAAGCAATTATTGAGGTGGAATGTAAATATCCACCAGAGGAGAATAAAGT GCTTGTTCTTGCGAAAGAAGGCTGGAACCCGGGGGTAATTGGAATTGTTGCTTCTAAATTGGTAGAACGTTTTTATCGTC CGACGATTGTGTTAAGTATTGATTCTGAGAAACAAATTGCCAAGGGATCTGCGCGCAGTATTGAAGGGTTTGATTTGTTT GCTAATTTATCGGATTGTAGAGATTTATTACCTCATTTTGGAGGTCATCCAATGGCAGCAGGGATGACGCTTCATATGAA TGATGTAGATGAACTGAGACGCCGTTTGAATGAACAAGCGAATGCAGTCTTAGTAGAGGAAGATTTTATTCCGATTACAA CTATAGATGCCGTTTGTAAAGTAGAGGATGTCACTCTTTCAGCAATTGAAGATATGCAGAAGTTGGCACCATTTGGTGTT GGAAATCCAAAACCATGTATCGCAGTGAAAGATGCTGATTTAGAAAGTATTCGCGCAATCGGATCAGATGGCTCTCATTT AAAAATGGCTCTTCGGGATGGACAAGCTACGCTAGATACAATTGGTTTTGGATTTGGTGCCTATGCAAAAGAGATTTCTC CAGTTGCGAAAGTTTCTGTTGTAGGAGAAGTATCTATTAACGAATGGAATAATTTTAAGAAACCGCAGTTAATGGTGCAA GATATCGCAGTAGAAGCGTGGCAACTATTTGATTGGCGCAGCATGCGTAATGTAGAAGTGAATTTAGCAGAACTTCCAAA AGAAAAAATAATTATAGTGTATTTTTCTGAAGATGTATTGAATAAATTTTCTTTAGAAGGTTATAAAGAGCAACTTGTGC ATGCATCAGCAGTCACTCGTTTAGATGGTGAGTATGTTGTTTTACTTGACTTACCAAAAGGGATAGAAGAGTTGCGAAAT ATATTTCAAGTTGGCTTCCCGGCTCGTATTTATACGTTATTTTATCAAGAAAATAATCATTTGTTTAGCACAGTTCCAAC GAGAGAACACTTTAAATGGTATTACTCTTTCTTACATCAAAAAGCCCCATTTTCTTTAAGGCAATATGGCGAGCAACTAT GCCGTCATAAAGGGTGGTCAAAAGATACAGTAAATTTCATGACACAGGTGTTTTTTGAGTTAGAATTTGTTACAATAAAA GACGGTGTCATTTTTATGGCCGAACAAATTCAAAAGCGTGATTTAACTGAATCGAACACATATCGTGAGAAAATGAACCA TTTACAACTTGAAAAAGAATTAGTATATAGCACATATCAACAGCTGTACACATGGTTTGAAACGATTCGTAATCATAAAG AAATAGAACAGTTAAGATAA
Upstream 100 bases:
>100_bases AATCCGTATTCGCCAGATTAATACGAATGTTGTGGAATGGTGAATGATATTGTCACCCCTTAATCTGTCTTGTATAATGA ACAGGTTAAGGGGTGATTTC
Downstream 100 bases:
>100_bases GGGGTTTGCTATTTACAAGCCTTTCATATCTGAGGAGGATTCAGAAATATGGATTTTAAGCAACATATCGCAATTGTACC AGATTATCCAAAAGAAGGAA
Product: single-stranded-DNA-specific exonuclease RecJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 779; Mature: 779
Protein sequence:
>779_residues MLQPKTRWKEKTYNEELVRELASKLQLSPLVVSLFLGRGLDTEDKIMDFFNTAEQEFHDPFLLEGMDRTVERVKQAIQNG EQILIFGDYDADGVSSTTVLFLALQELGADVEFYIPNRFTEGYGPNEEAFRWAHQAGFSLIITVDTGIAAVHEAQVAKEL GIDLIITDHHEPPPELPEALAIIHPKLEGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEIAVIGTVADLVSLHGENRLI VQRGLKHMRMTKNIGLKALFKVANVSQSEITEESIGFLLAPRINAVGRLEDAAPAVHLLLSEDPEEAKELAEEIDELNKL RKDIVKQITEEAIIEVECKYPPEENKVLVLAKEGWNPGVIGIVASKLVERFYRPTIVLSIDSEKQIAKGSARSIEGFDLF ANLSDCRDLLPHFGGHPMAAGMTLHMNDVDELRRRLNEQANAVLVEEDFIPITTIDAVCKVEDVTLSAIEDMQKLAPFGV GNPKPCIAVKDADLESIRAIGSDGSHLKMALRDGQATLDTIGFGFGAYAKEISPVAKVSVVGEVSINEWNNFKKPQLMVQ DIAVEAWQLFDWRSMRNVEVNLAELPKEKIIIVYFSEDVLNKFSLEGYKEQLVHASAVTRLDGEYVVLLDLPKGIEELRN IFQVGFPARIYTLFYQENNHLFSTVPTREHFKWYYSFLHQKAPFSLRQYGEQLCRHKGWSKDTVNFMTQVFFELEFVTIK DGVIFMAEQIQKRDLTESNTYREKMNHLQLEKELVYSTYQQLYTWFETIRNHKEIEQLR
Sequences:
>Translated_779_residues MLQPKTRWKEKTYNEELVRELASKLQLSPLVVSLFLGRGLDTEDKIMDFFNTAEQEFHDPFLLEGMDRTVERVKQAIQNG EQILIFGDYDADGVSSTTVLFLALQELGADVEFYIPNRFTEGYGPNEEAFRWAHQAGFSLIITVDTGIAAVHEAQVAKEL GIDLIITDHHEPPPELPEALAIIHPKLEGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEIAVIGTVADLVSLHGENRLI VQRGLKHMRMTKNIGLKALFKVANVSQSEITEESIGFLLAPRINAVGRLEDAAPAVHLLLSEDPEEAKELAEEIDELNKL RKDIVKQITEEAIIEVECKYPPEENKVLVLAKEGWNPGVIGIVASKLVERFYRPTIVLSIDSEKQIAKGSARSIEGFDLF ANLSDCRDLLPHFGGHPMAAGMTLHMNDVDELRRRLNEQANAVLVEEDFIPITTIDAVCKVEDVTLSAIEDMQKLAPFGV GNPKPCIAVKDADLESIRAIGSDGSHLKMALRDGQATLDTIGFGFGAYAKEISPVAKVSVVGEVSINEWNNFKKPQLMVQ DIAVEAWQLFDWRSMRNVEVNLAELPKEKIIIVYFSEDVLNKFSLEGYKEQLVHASAVTRLDGEYVVLLDLPKGIEELRN IFQVGFPARIYTLFYQENNHLFSTVPTREHFKWYYSFLHQKAPFSLRQYGEQLCRHKGWSKDTVNFMTQVFFELEFVTIK DGVIFMAEQIQKRDLTESNTYREKMNHLQLEKELVYSTYQQLYTWFETIRNHKEIEQLR >Mature_779_residues MLQPKTRWKEKTYNEELVRELASKLQLSPLVVSLFLGRGLDTEDKIMDFFNTAEQEFHDPFLLEGMDRTVERVKQAIQNG EQILIFGDYDADGVSSTTVLFLALQELGADVEFYIPNRFTEGYGPNEEAFRWAHQAGFSLIITVDTGIAAVHEAQVAKEL GIDLIITDHHEPPPELPEALAIIHPKLEGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEIAVIGTVADLVSLHGENRLI VQRGLKHMRMTKNIGLKALFKVANVSQSEITEESIGFLLAPRINAVGRLEDAAPAVHLLLSEDPEEAKELAEEIDELNKL RKDIVKQITEEAIIEVECKYPPEENKVLVLAKEGWNPGVIGIVASKLVERFYRPTIVLSIDSEKQIAKGSARSIEGFDLF ANLSDCRDLLPHFGGHPMAAGMTLHMNDVDELRRRLNEQANAVLVEEDFIPITTIDAVCKVEDVTLSAIEDMQKLAPFGV GNPKPCIAVKDADLESIRAIGSDGSHLKMALRDGQATLDTIGFGFGAYAKEISPVAKVSVVGEVSINEWNNFKKPQLMVQ DIAVEAWQLFDWRSMRNVEVNLAELPKEKIIIVYFSEDVLNKFSLEGYKEQLVHASAVTRLDGEYVVLLDLPKGIEELRN IFQVGFPARIYTLFYQENNHLFSTVPTREHFKWYYSFLHQKAPFSLRQYGEQLCRHKGWSKDTVNFMTQVFFELEFVTIK DGVIFMAEQIQKRDLTESNTYREKMNHLQLEKELVYSTYQQLYTWFETIRNHKEIEQLR
Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]
COG id: COG0608
COG function: function code L; Single-stranded DNA-specific exonuclease
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 OB DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1789259, Length=526, Percent_Identity=33.8403041825095, Blast_Score=263, Evalue=5e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003156 - InterPro: IPR001667 - InterPro: IPR004610 - InterPro: IPR018779 [H]
Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]
EC number: 3.1.-.- [C]
Molecular weight: Translated: 88237; Mature: 88237
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQPKTRWKEKTYNEELVRELASKLQLSPLVVSLFLGRGLDTEDKIMDFFNTAEQEFHDP CCCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC FLLEGMDRTVERVKQAIQNGEQILIFGDYDADGVSSTTVLFLALQELGADVEFYIPNRFT HHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCC EGYGPNEEAFRWAHQAGFSLIITVDTGIAAVHEAQVAKELGIDLIITDHHEPPPELPEAL CCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHH AIIHPKLEGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEIAVIGTVADLVSLHGENRLI HHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VQRGLKHMRMTKNIGLKALFKVANVSQSEITEESIGFLLAPRINAVGRLEDAAPAVHLLL HHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCEEECCCCCHHHCCCHHCHHEEEEE SEDPEEAKELAEEIDELNKLRKDIVKQITEEAIIEVECKYPPEENKVLVLAKEGWNPGVI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEEEECCCCCCHH GIVASKLVERFYRPTIVLSIDSEKQIAKGSARSIEGFDLFANLSDCRDLLPHFGGHPMAA HHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCC GMTLHMNDVDELRRRLNEQANAVLVEEDFIPITTIDAVCKVEDVTLSAIEDMQKLAPFGV CEEEECCCHHHHHHHHHHHHCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCC GNPKPCIAVKDADLESIRAIGSDGSHLKMALRDGQATLDTIGFGFGAYAKEISPVAKVSV CCCCCEEEEECCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCHHHHHHHCCCHHEEEE VGEVSINEWNNFKKPQLMVQDIAVEAWQLFDWRSMRNVEVNLAELPKEKIIIVYFSEDVL EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCEEEEEECHHHH NKFSLEGYKEQLVHASAVTRLDGEYVVLLDLPKGIEELRNIFQVGFPARIYTLFYQENNH HHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEEEECCCE LFSTVPTREHFKWYYSFLHQKAPFSLRQYGEQLCRHKGWSKDTVNFMTQVFFELEFVTIK EEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEEC DGVIFMAEQIQKRDLTESNTYREKMNHLQLEKELVYSTYQQLYTWFETIRNHKEIEQLR CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCC >Mature Secondary Structure MLQPKTRWKEKTYNEELVRELASKLQLSPLVVSLFLGRGLDTEDKIMDFFNTAEQEFHDP CCCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC FLLEGMDRTVERVKQAIQNGEQILIFGDYDADGVSSTTVLFLALQELGADVEFYIPNRFT HHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCC EGYGPNEEAFRWAHQAGFSLIITVDTGIAAVHEAQVAKELGIDLIITDHHEPPPELPEAL CCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHH AIIHPKLEGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEIAVIGTVADLVSLHGENRLI HHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VQRGLKHMRMTKNIGLKALFKVANVSQSEITEESIGFLLAPRINAVGRLEDAAPAVHLLL HHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCEEECCCCCHHHCCCHHCHHEEEEE SEDPEEAKELAEEIDELNKLRKDIVKQITEEAIIEVECKYPPEENKVLVLAKEGWNPGVI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEEEECCCCCCHH GIVASKLVERFYRPTIVLSIDSEKQIAKGSARSIEGFDLFANLSDCRDLLPHFGGHPMAA HHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCC GMTLHMNDVDELRRRLNEQANAVLVEEDFIPITTIDAVCKVEDVTLSAIEDMQKLAPFGV CEEEECCCHHHHHHHHHHHHCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCC GNPKPCIAVKDADLESIRAIGSDGSHLKMALRDGQATLDTIGFGFGAYAKEISPVAKVSV CCCCCEEEEECCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCHHHHHHHCCCHHEEEE VGEVSINEWNNFKKPQLMVQDIAVEAWQLFDWRSMRNVEVNLAELPKEKIIIVYFSEDVL EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCEEEEEECHHHH NKFSLEGYKEQLVHASAVTRLDGEYVVLLDLPKGIEELRNIFQVGFPARIYTLFYQENNH HHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEEEECCCE LFSTVPTREHFKWYYSFLHQKAPFSLRQYGEQLCRHKGWSKDTVNFMTQVFFELEFVTIK EEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEEC DGVIFMAEQIQKRDLTESNTYREKMNHLQLEKELVYSTYQQLYTWFETIRNHKEIEQLR CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on ester bonds [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]