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The map label for this gene is ydfM [H]

Identifier: 152976828

GI number: 152976828

Start: 3173436

End: 3174329

Strand: Reverse

Name: ydfM [H]

Synonym: Bcer98_3126

Alternate gene names: 152976828

Gene position: 3174329-3173436 (Counterclockwise)

Preceding gene: 152976829

Following gene: 152976827

Centisome position: 77.67

GC content: 38.59

Gene sequence:

>894_bases
ATGGAAAAAGATGAACGTTTTAAACAGGCGGAGTTTGGAGCTATTGTCGGAATCGTTGGGAATATTGTGCTAGCGATTGT
GAAAGCAGTAATCGGCTATATGGGAAATAGTAAAGCGCTTTTAGCAGATGCAGTTCATTCAGCATCGGATGTAGTTGGTT
CGTTGGCTGTCTTTTTTGGGCTGCGTGCAGCTAAGCAACCGCCTGATGAAGATCATCCTTATGGTCATGGGAAAGCGGAA
TCGATCTCAGCGATTATTGTTGCCGTTTTATTATTTATTGTTGGAATTGAAATTGCTATATCTTCGATTAAAGCTTTTAC
TGAGGAACTTGATCCGCCGAAAGGGATTGCCATTTTTGCTGTTATCCTTTCTATTGTTGTTAAGGAAGGGATGTTTCAAT
ATAAGTATCGGTTAGGGAAACGGGTAAATAGTGATGCAATTATTGCAAATGCATATGAACACCGTTCAGATGTGTTTTCT
TCAATTACAGCTTTAATCGGAATTTGTGCAGCAATTATTGGAAATCAAATAGATGCTAGTTGGCTTGTGTATGCTGATCC
TGTTGCAGGGCTATTTGTCTCATTATTTGTTGTAAAGATGGCATGGGATATTGGTGGAGAGGCGATTCATACGACACTTG
ATCATGTTCTGCATGAAGAACATGTCATTCCATTAAGGGAAGCAGTTCTTCAAATAGAAGGCGTGAAGAAAATAGGTTCT
CTATATGCGCGTGAGCATGGACATTATGTAATTGTTGATATTAAAGTGTCTGTTGACCCATATATTACAGTGGAAGAAGG
GCATCGTATTGGGAAATGTGTAAAAGAAGTATTAATGAAGCAAGATAATGTCCAAAATGTGTTTGTTCATATTAATCCGT
ATTCGCCAGATTAA

Upstream 100 bases:

>100_bases
TTATGAAAGTAGTAATGGATAAACGAGAAGGGAGTGATACTATTGTTAGCATTTTTGCTACAATGAAAAGGTATTTTTGA
GAAAAGAAGGGACTTCAGTT

Downstream 100 bases:

>100_bases
TACGAATGTTGTGGAATGGTGAATGATATTGTCACCCCTTAATCTGTCTTGTATAATGAACAGGTTAAGGGGTGATTTCG
TGTTACAACCGAAAACGCGT

Product: cation diffusion facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MEKDERFKQAEFGAIVGIVGNIVLAIVKAVIGYMGNSKALLADAVHSASDVVGSLAVFFGLRAAKQPPDEDHPYGHGKAE
SISAIIVAVLLFIVGIEIAISSIKAFTEELDPPKGIAIFAVILSIVVKEGMFQYKYRLGKRVNSDAIIANAYEHRSDVFS
SITALIGICAAIIGNQIDASWLVYADPVAGLFVSLFVVKMAWDIGGEAIHTTLDHVLHEEHVIPLREAVLQIEGVKKIGS
LYAREHGHYVIVDIKVSVDPYITVEEGHRIGKCVKEVLMKQDNVQNVFVHINPYSPD

Sequences:

>Translated_297_residues
MEKDERFKQAEFGAIVGIVGNIVLAIVKAVIGYMGNSKALLADAVHSASDVVGSLAVFFGLRAAKQPPDEDHPYGHGKAE
SISAIIVAVLLFIVGIEIAISSIKAFTEELDPPKGIAIFAVILSIVVKEGMFQYKYRLGKRVNSDAIIANAYEHRSDVFS
SITALIGICAAIIGNQIDASWLVYADPVAGLFVSLFVVKMAWDIGGEAIHTTLDHVLHEEHVIPLREAVLQIEGVKKIGS
LYAREHGHYVIVDIKVSVDPYITVEEGHRIGKCVKEVLMKQDNVQNVFVHINPYSPD
>Mature_297_residues
MEKDERFKQAEFGAIVGIVGNIVLAIVKAVIGYMGNSKALLADAVHSASDVVGSLAVFFGLRAAKQPPDEDHPYGHGKAE
SISAIIVAVLLFIVGIEIAISSIKAFTEELDPPKGIAIFAVILSIVVKEGMFQYKYRLGKRVNSDAIIANAYEHRSDVFS
SITALIGICAAIIGNQIDASWLVYADPVAGLFVSLFVVKMAWDIGGEAIHTTLDHVLHEEHVIPLREAVLQIEGVKKIGS
LYAREHGHYVIVDIKVSVDPYITVEEGHRIGKCVKEVLMKQDNVQNVFVHINPYSPD

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=280, Percent_Identity=24.2857142857143, Blast_Score=92, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI115533508, Length=279, Percent_Identity=22.9390681003584, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI115533506, Length=279, Percent_Identity=22.9390681003584, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI72000060, Length=304, Percent_Identity=21.0526315789474, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI72000062, Length=304, Percent_Identity=21.0526315789474, Blast_Score=69, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6325032, Length=253, Percent_Identity=30.4347826086957, Blast_Score=108, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6323831, Length=218, Percent_Identity=29.8165137614679, Blast_Score=87, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 32310; Mature: 32310

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKDERFKQAEFGAIVGIVGNIVLAIVKAVIGYMGNSKALLADAVHSASDVVGSLAVFFG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LRAAKQPPDEDHPYGHGKAESISAIIVAVLLFIVGIEIAISSIKAFTEELDPPKGIAIFA
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
VILSIVVKEGMFQYKYRLGKRVNSDAIIANAYEHRSDVFSSITALIGICAAIIGNQIDAS
HHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
WLVYADPVAGLFVSLFVVKMAWDIGGEAIHTTLDHVLHEEHVIPLREAVLQIEGVKKIGS
EEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LYAREHGHYVIVDIKVSVDPYITVEEGHRIGKCVKEVLMKQDNVQNVFVHINPYSPD
HHHHCCCCEEEEEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MEKDERFKQAEFGAIVGIVGNIVLAIVKAVIGYMGNSKALLADAVHSASDVVGSLAVFFG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LRAAKQPPDEDHPYGHGKAESISAIIVAVLLFIVGIEIAISSIKAFTEELDPPKGIAIFA
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
VILSIVVKEGMFQYKYRLGKRVNSDAIIANAYEHRSDVFSSITALIGICAAIIGNQIDAS
HHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
WLVYADPVAGLFVSLFVVKMAWDIGGEAIHTTLDHVLHEEHVIPLREAVLQIEGVKKIGS
EEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LYAREHGHYVIVDIKVSVDPYITVEEGHRIGKCVKEVLMKQDNVQNVFVHINPYSPD
HHHHCCCCEEEEEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]