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The map label for this gene is ydjH [C]

Identifier: 150398567

GI number: 150398567

Start: 3578835

End: 3579827

Strand: Direct

Name: ydjH [C]

Synonym: Smed_3378

Alternate gene names: 150398567

Gene position: 3578835-3579827 (Clockwise)

Preceding gene: 150398566

Following gene: 150398569

Centisome position: 94.63

GC content: 62.94

Gene sequence:

>993_bases
ATGGCAAAATACGACGTGCTGACGATCGGTAACGCGATCGTCGATATCATTGCGCGCTGCGATGACAGCTTTCTCGAAGA
AAACGGCATCATCAAGGGCGCGATGAACCTCATCAATGCCGATCGTGCCGAGTTGCTCTATTCGCGGATGGGACCGGCGG
TCGAAGCCTCGGGAGGAAGCGCGGGAAATACCGCGGCTGGTGTCGCCAGCCTCGGCGGACGGGCTGCGTATTTCGGGAAG
GTCGCCGACGACCAGCTCGGTGAGATCTTCACACACGACATCCGCGCGCAGGGCGTCCACTTTCAGACGAAGCCTCTTGA
CGGACAGCCGCCGACGGCGCGTTCGATGATCTTCGTCACCGAGGATGGCGAGCGATCCATGAACACCTATCTCGGCGCCT
GCGTCGAGCTCGGCCCGGAGGATGTCGAAGACGACGTCGTCGCCCATTCGAAAGTCACCTATTTCGAGGGCTATCTCTGG
GACCCGCCGCGCGCCAAGGACGCGATCCGCGAAGCGGCGCGCATCGCCCACGCGCATGGACGGGAGACCGCGATGACTCT
GTCCGACAGTTTCTGCGTGCATCGCTACCGGGGCGAGTTTCTCGAGCTCATGCGCTCCGGCACCGTCGATATCGTCTTCG
CCAACCGGCAGGAGGCACTCGCGCTTTACGAAACAGAGGATTTCGACCGCGCGCTCGAGCTGTTGTCCAAGGACTGCAAG
CTCGCGGCTGTCACGCTCAGCGAGGAAGGTTCCGTCGTCGTACGCGGGGCTGAGCGCATATACGTCGGTGCAAGCGTTCT
GGAGCAGGTGGTCGACACCACCGGCGCCGGTGATCTCTACGCCGCGGGTTTCCTCTTCGGCTATACTGCTGGCCGTTCCC
TCGACAGTTGCAGCAAGCTCGGCAATCTGGCCGCAGGCATCGTCATCGGCCAAATCGGCCCGCGGCCGCTGATCTCGCTT
GCCTCCGCTGCCCGCCAGGCTGGCCTCGTTTAG

Upstream 100 bases:

>100_bases
ACCTGTCCCGAACACGCGAAAAAGGCTGAAGGCGTCTTCCAAATGCCCGGAAAACCGCTATTAACGAACACCGGTCACCA
AGGAAACCCGGACGGAGTTC

Downstream 100 bases:

>100_bases
GACCGCGCCGGTTCCGGGGAACCGGCGAGCCGCGCGGATCAGGGGGGGCGGTACGAGATAAATCCGCACAAGGATCGTCA
TCTGACACAAGGTCAGATCG

Product: ribokinase-like domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MAKYDVLTIGNAIVDIIARCDDSFLEENGIIKGAMNLINADRAELLYSRMGPAVEASGGSAGNTAAGVASLGGRAAYFGK
VADDQLGEIFTHDIRAQGVHFQTKPLDGQPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEDDVVAHSKVTYFEGYLW
DPPRAKDAIREAARIAHAHGRETAMTLSDSFCVHRYRGEFLELMRSGTVDIVFANRQEALALYETEDFDRALELLSKDCK
LAAVTLSEEGSVVVRGAERIYVGASVLEQVVDTTGAGDLYAAGFLFGYTAGRSLDSCSKLGNLAAGIVIGQIGPRPLISL
ASAARQAGLV

Sequences:

>Translated_330_residues
MAKYDVLTIGNAIVDIIARCDDSFLEENGIIKGAMNLINADRAELLYSRMGPAVEASGGSAGNTAAGVASLGGRAAYFGK
VADDQLGEIFTHDIRAQGVHFQTKPLDGQPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEDDVVAHSKVTYFEGYLW
DPPRAKDAIREAARIAHAHGRETAMTLSDSFCVHRYRGEFLELMRSGTVDIVFANRQEALALYETEDFDRALELLSKDCK
LAAVTLSEEGSVVVRGAERIYVGASVLEQVVDTTGAGDLYAAGFLFGYTAGRSLDSCSKLGNLAAGIVIGQIGPRPLISL
ASAARQAGLV
>Mature_329_residues
AKYDVLTIGNAIVDIIARCDDSFLEENGIIKGAMNLINADRAELLYSRMGPAVEASGGSAGNTAAGVASLGGRAAYFGKV
ADDQLGEIFTHDIRAQGVHFQTKPLDGQPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEDDVVAHSKVTYFEGYLWD
PPRAKDAIREAARIAHAHGRETAMTLSDSFCVHRYRGEFLELMRSGTVDIVFANRQEALALYETEDFDRALELLSKDCKL
AAVTLSEEGSVVVRGAERIYVGASVLEQVVDTTGAGDLYAAGFLFGYTAGRSLDSCSKLGNLAAGIVIGQIGPRPLISLA
SAARQAGLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI32484975, Length=334, Percent_Identity=25.4491017964072, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI32484973, Length=334, Percent_Identity=25.4491017964072, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI87081971, Length=316, Percent_Identity=25.6329113924051, Blast_Score=82, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17541820, Length=330, Percent_Identity=23.3333333333333, Blast_Score=68, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17532905, Length=261, Percent_Identity=28.3524904214559, Blast_Score=65, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6322565, Length=335, Percent_Identity=27.1641791044776, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24663633, Length=343, Percent_Identity=27.1137026239067, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI21356339, Length=343, Percent_Identity=27.1137026239067, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI21355521, Length=338, Percent_Identity=25.4437869822485, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 35221; Mature: 35090

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKYDVLTIGNAIVDIIARCDDSFLEENGIIKGAMNLINADRAELLYSRMGPAVEASGGS
CCCEEEEEHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCEECCCCC
AGNTAAGVASLGGRAAYFGKVADDQLGEIFTHDIRAQGVHFQTKPLDGQPPTARSMIFVT
CCCCHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEE
EDGERSMNTYLGACVELGPEDVEDDVVAHSKVTYFEGYLWDPPRAKDAIREAARIAHAHG
CCCCHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECCEECCCCCHHHHHHHHHHHHHHCC
RETAMTLSDSFCVHRYRGEFLELMRSGTVDIVFANRQEALALYETEDFDRALELLSKDCK
CCEEEEECHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCHHHHHHHHHCCCE
LAAVTLSEEGSVVVRGAERIYVGASVLEQVVDTTGAGDLYAAGFLFGYTAGRSLDSCSKL
EEEEEECCCCCEEEECCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHH
GNLAAGIVIGQIGPRPLISLASAARQAGLV
HHHHHHEEEECCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKYDVLTIGNAIVDIIARCDDSFLEENGIIKGAMNLINADRAELLYSRMGPAVEASGGS
CCEEEEEHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCEECCCCC
AGNTAAGVASLGGRAAYFGKVADDQLGEIFTHDIRAQGVHFQTKPLDGQPPTARSMIFVT
CCCCHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEE
EDGERSMNTYLGACVELGPEDVEDDVVAHSKVTYFEGYLWDPPRAKDAIREAARIAHAHG
CCCCHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECCEECCCCCHHHHHHHHHHHHHHCC
RETAMTLSDSFCVHRYRGEFLELMRSGTVDIVFANRQEALALYETEDFDRALELLSKDCK
CCEEEEECHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCHHHHHHHHHCCCE
LAAVTLSEEGSVVVRGAERIYVGASVLEQVVDTTGAGDLYAAGFLFGYTAGRSLDSCSKL
EEEEEECCCCCEEEECCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHH
GNLAAGIVIGQIGPRPLISLASAARQAGLV
HHHHHHEEEECCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]