Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is 150398566
Identifier: 150398566
GI number: 150398566
Start: 3578283
End: 3578708
Strand: Direct
Name: 150398566
Synonym: Smed_3377
Alternate gene names: NA
Gene position: 3578283-3578708 (Clockwise)
Preceding gene: 150398564
Following gene: 150398567
Centisome position: 94.62
GC content: 58.22
Gene sequence:
>426_bases ATGAAATCGACAAGCTATTACCCGGTCATCATGACGGAGGACGTGCAGCAGACGGCAGATTTCTACGTCAGGCACCTGCG CTTCGAGCCGCTCTTCACCAGCGACTGGTACGTTCACCTCCAGTCGAAAGAGGACGAGCATGTAACGCTCGCAGTTCTCG ACTGCCGTCACGAGACGGTACCGGAACGGCATCGCGCGCCCGTGCGTGGCCTTCTCCTGAATTTCGAGGTGGAAGATCCC GACCGTCTTTATGCCGAAATGCAGGATGCCGGCCTGCCCATTCTCAAGCCGATCTGCGACGAGGAATTCGGTCAGCGTCA TTTCATCACCGCTGATCCGAACGGCGTGATGATCGACATCATCAAGCCGATCCCCCCGAGCGCCGGCTTTGCCGATGCCT ATGATGAAAGGGCGCTGCCAACGTGA
Upstream 100 bases:
>100_bases CGATTGGATCGCCTTGGTTCTTTCTGTTGCATACATGCAGCCTGTATGTTAACAATGAGTACATGCAGATTGTATGTTAA TATTCGACGGAGGAAAAGGA
Downstream 100 bases:
>100_bases GGGTGGAGACGCCAACTGCCCGGTCTACCTGTCCCGAACACGCGAAAAAGGCTGAAGGCGTCTTCCAAATGCCCGGAAAA CCGCTATTAACGAACACCGG
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Glyoxalase/Bleomycin Resistance Protein; Antibiotic Resistance Protein; Glyoxalase Protein; Glyoxalase/Bleomycin Resistance-Like Protein
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MKSTSYYPVIMTEDVQQTADFYVRHLRFEPLFTSDWYVHLQSKEDEHVTLAVLDCRHETVPERHRAPVRGLLLNFEVEDP DRLYAEMQDAGLPILKPICDEEFGQRHFITADPNGVMIDIIKPIPPSAGFADAYDERALPT
Sequences:
>Translated_141_residues MKSTSYYPVIMTEDVQQTADFYVRHLRFEPLFTSDWYVHLQSKEDEHVTLAVLDCRHETVPERHRAPVRGLLLNFEVEDP DRLYAEMQDAGLPILKPICDEEFGQRHFITADPNGVMIDIIKPIPPSAGFADAYDERALPT >Mature_141_residues MKSTSYYPVIMTEDVQQTADFYVRHLRFEPLFTSDWYVHLQSKEDEHVTLAVLDCRHETVPERHRAPVRGLLLNFEVEDP DRLYAEMQDAGLPILKPICDEEFGQRHFITADPNGVMIDIIKPIPPSAGFADAYDERALPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16261; Mature: 16261
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSTSYYPVIMTEDVQQTADFYVRHLRFEPLFTSDWYVHLQSKEDEHVTLAVLDCRHETV CCCCCCCEEEEECCHHHHHHHHHHHHCCCCEECCCEEEEEECCCCCEEEEEEEECCCCCC PERHRAPVRGLLLNFEVEDPDRLYAEMQDAGLPILKPICDEEFGQRHFITADPNGVMIDI CHHHCCCCEEEEEEEEECCHHHHHHHHHHCCCCHHHHHCCHHCCCEEEEEECCCCEEEEE IKPIPPSAGFADAYDERALPT ECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKSTSYYPVIMTEDVQQTADFYVRHLRFEPLFTSDWYVHLQSKEDEHVTLAVLDCRHETV CCCCCCCEEEEECCHHHHHHHHHHHHCCCCEECCCEEEEEECCCCCEEEEEEEECCCCCC PERHRAPVRGLLLNFEVEDPDRLYAEMQDAGLPILKPICDEEFGQRHFITADPNGVMIDI CHHHCCCCEEEEEEEEECCHHHHHHHHHHCCCCHHHHHCCHHCCCEEEEEECCCCEEEEE IKPIPPSAGFADAYDERALPT ECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA