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The map label for this gene is 150398543

Identifier: 150398543

GI number: 150398543

Start: 3552684

End: 3553970

Strand: Direct

Name: 150398543

Synonym: Smed_3354

Alternate gene names: NA

Gene position: 3552684-3553970 (Clockwise)

Preceding gene: 150398542

Following gene: 150398544

Centisome position: 93.94

GC content: 63.71

Gene sequence:

>1287_bases
ATGAACGCGATTGAATATACGATCGACAGCGGCGCAGCCGGAGATTGGCCTTTCGAGGGGACGCGATCGGGCGATCTCGA
GCAGCTTCGGCCTCTGCCGCGCATCTCGATTCATGCCTTTTGCGAGAGCGAAGCCGTCCAGCGGCTGATGGAGCGCTGCG
GCCAGGATCGCCGGATGGCGAAAGTGAGCCTGCGCGTTACCGGCGGCGGCATCGCAGCCGCCGCGACCACCTTTGCGAGC
GTCTCGACCCCCAACCTGATCATTCTTGAAACCGCGACCGAGCCGCGCTCGCTGCTTTCGGAACTTGCGCCGCTTGCCGA
AGTCTGCGATCCGAGCACCAGGGTCATCGTCATCGGTCGTCACAACGACATCGCGCTCTACCGCGAGCTTCTCCGCAACG
GCATCTCCGAATACATGGTCGCGCCCGTCGGCATGGCCGATATGCTGAGCGCTGTCTCGGCGATCTTCGTGGACCCGGAG
GCCGAGCCGCTCGGGCGCAGCCTTGCCTTCATCGGCGCGAAGGGCGGCTGCGGCTCGTCGGGCATCGCCCACAATTGCGC
CTGGGGCATTTCAAATCTGTTTTCGACCGAGACGATCCTTGCCGATCTCGACCTGCCTTATGGCACCGCCAATATCGACT
TCGACCAGGACCCGCCGCAGGGGATTGCCGAGGCGGTTTTCGCACCGGAGCGGTTGGACGAGGTCTTCCTCGATCGGCTC
CTGACCAGATGCTCGGAGCATCTGTCGCTGCTCGCTGCTCCCTCCATGCTCGACCGCGCCTATGATTTCGAGACAGCCGC
CTTTCAGCCGATCCTCGAGATCCTTCAGCGTAGCGCACCCGTATCCGTTCTGGATCTGCCGCACAGCTGGTCAGACTGGA
CCCGATCGGTGCTGTCGGCCGCCGACGAGGTCGTCATCACCGCCGCTCCGGACCTTGCGAGCCTCAGGAACGCGAAGAAC
CTGCTCGATGCCATGAAGAAGCTGAGGCCGAACGACAAGCCGCCGCATCTCGTGCTCAACCAGGTTGGCCTGCCGAAGCG
TCCGGAGATTGCGCCCGACGAGTTCTGCGCATCACTGGAGGTCGAGGCCGCAGCAATCATTCCGTTCGATGCGGTCCTCT
TCGGTAACGCCTCCAACAGCGGCCGCATGATCGCGGAGATCGACAGGAAATCGCCGGCCGCCGAGACCTTTTCGCAGCTG
TCCCACCTTTTGACCGGGCGAACCGCCGCCAAGAAAGCCCGTCGGGGCGGCCTCGGCAAGGTTCTGGCAAAGCTCGGAAA
GCGGTAG

Upstream 100 bases:

>100_bases
GCAGCGCGGGCAGGTGATCGATAGCTGGCGCGGCACGGAAAAGGGCGACGGCGGAACCACGATCGTCTTCAACTGACATG
GAGCCATCCAGGGAAAAGCG

Downstream 100 bases:

>100_bases
CGGCAATATTATCGATCCTGCATCCGCAGGTAACGAGTGCTGAAGCAATTGGAATGAAGTCATGTTTGGCAAACGCGGAA
ATGAAGGTCCTGGCAAGGGT

Product: response regulator receiver protein

Products: NA

Alternate protein names: Pilus Assembly Protein CpaE; Pilus Assembly Protein; Response Regulator Receiver Domain-Containing Protein; Flp Pilus Assembly Protein ATPase CpaE; Flp Pilus Assembly Protein ATPase CpaE-Like; Pilus Assembly ATPase CpaE; Flp Pilus Assembly Protein ATPase CpaE-Like Protein; Flp Pilus Assembly Protein ATPase; Two-Component Response Regulator; Response Regulator; Flp Pilus Assembly Protein; Response Regulator Receiver; Flp Pilus Assembly ATPase CpaE; Response Receiver Involved In Pilum Assembly; CtpF Protein; Flp Pilus Assembly ATPase; Septum Site-Determining Protein; Fimbriae Assembly-Related Protein; CpaE2 Pilus Assembly Protein; ParaA Family ATPase; TadE-Like; Cobyrinic Acid Ac-Diamide Synthase; Component Of Type IV Pilus; Components Of Type IV Pilus

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MNAIEYTIDSGAAGDWPFEGTRSGDLEQLRPLPRISIHAFCESEAVQRLMERCGQDRRMAKVSLRVTGGGIAAAATTFAS
VSTPNLIILETATEPRSLLSELAPLAEVCDPSTRVIVIGRHNDIALYRELLRNGISEYMVAPVGMADMLSAVSAIFVDPE
AEPLGRSLAFIGAKGGCGSSGIAHNCAWGISNLFSTETILADLDLPYGTANIDFDQDPPQGIAEAVFAPERLDEVFLDRL
LTRCSEHLSLLAAPSMLDRAYDFETAAFQPILEILQRSAPVSVLDLPHSWSDWTRSVLSAADEVVITAAPDLASLRNAKN
LLDAMKKLRPNDKPPHLVLNQVGLPKRPEIAPDEFCASLEVEAAAIIPFDAVLFGNASNSGRMIAEIDRKSPAAETFSQL
SHLLTGRTAAKKARRGGLGKVLAKLGKR

Sequences:

>Translated_428_residues
MNAIEYTIDSGAAGDWPFEGTRSGDLEQLRPLPRISIHAFCESEAVQRLMERCGQDRRMAKVSLRVTGGGIAAAATTFAS
VSTPNLIILETATEPRSLLSELAPLAEVCDPSTRVIVIGRHNDIALYRELLRNGISEYMVAPVGMADMLSAVSAIFVDPE
AEPLGRSLAFIGAKGGCGSSGIAHNCAWGISNLFSTETILADLDLPYGTANIDFDQDPPQGIAEAVFAPERLDEVFLDRL
LTRCSEHLSLLAAPSMLDRAYDFETAAFQPILEILQRSAPVSVLDLPHSWSDWTRSVLSAADEVVITAAPDLASLRNAKN
LLDAMKKLRPNDKPPHLVLNQVGLPKRPEIAPDEFCASLEVEAAAIIPFDAVLFGNASNSGRMIAEIDRKSPAAETFSQL
SHLLTGRTAAKKARRGGLGKVLAKLGKR
>Mature_428_residues
MNAIEYTIDSGAAGDWPFEGTRSGDLEQLRPLPRISIHAFCESEAVQRLMERCGQDRRMAKVSLRVTGGGIAAAATTFAS
VSTPNLIILETATEPRSLLSELAPLAEVCDPSTRVIVIGRHNDIALYRELLRNGISEYMVAPVGMADMLSAVSAIFVDPE
AEPLGRSLAFIGAKGGCGSSGIAHNCAWGISNLFSTETILADLDLPYGTANIDFDQDPPQGIAEAVFAPERLDEVFLDRL
LTRCSEHLSLLAAPSMLDRAYDFETAAFQPILEILQRSAPVSVLDLPHSWSDWTRSVLSAADEVVITAAPDLASLRNAKN
LLDAMKKLRPNDKPPHLVLNQVGLPKRPEIAPDEFCASLEVEAAAIIPFDAVLFGNASNSGRMIAEIDRKSPAAETFSQL
SHLLTGRTAAKKARRGGLGKVLAKLGKR

Specific function: Unknown

COG id: COG4963

COG function: function code U; Flp pilus assembly protein, ATPase CpaE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46051; Mature: 46051

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAIEYTIDSGAAGDWPFEGTRSGDLEQLRPLPRISIHAFCESEAVQRLMERCGQDRRMA
CCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE
KVSLRVTGGGIAAAATTFASVSTPNLIILETATEPRSLLSELAPLAEVCDPSTRVIVIGR
EEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEC
HNDIALYRELLRNGISEYMVAPVGMADMLSAVSAIFVDPEAEPLGRSLAFIGAKGGCGSS
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCCCEEEEECCCCCCCC
GIAHNCAWGISNLFSTETILADLDLPYGTANIDFDQDPPQGIAEAVFAPERLDEVFLDRL
CCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHH
LTRCSEHLSLLAAPSMLDRAYDFETAAFQPILEILQRSAPVSVLDLPHSWSDWTRSVLSA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHC
ADEVVITAAPDLASLRNAKNLLDAMKKLRPNDKPPHLVLNQVGLPKRPEIAPDEFCASLE
CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCC
VEAAAIIPFDAVLFGNASNSGRMIAEIDRKSPAAETFSQLSHLLTGRTAAKKARRGGLGK
CCEEEECCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHCCCHHH
VLAKLGKR
HHHHHCCC
>Mature Secondary Structure
MNAIEYTIDSGAAGDWPFEGTRSGDLEQLRPLPRISIHAFCESEAVQRLMERCGQDRRMA
CCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE
KVSLRVTGGGIAAAATTFASVSTPNLIILETATEPRSLLSELAPLAEVCDPSTRVIVIGR
EEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEC
HNDIALYRELLRNGISEYMVAPVGMADMLSAVSAIFVDPEAEPLGRSLAFIGAKGGCGSS
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCCCEEEEECCCCCCCC
GIAHNCAWGISNLFSTETILADLDLPYGTANIDFDQDPPQGIAEAVFAPERLDEVFLDRL
CCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHH
LTRCSEHLSLLAAPSMLDRAYDFETAAFQPILEILQRSAPVSVLDLPHSWSDWTRSVLSA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHC
ADEVVITAAPDLASLRNAKNLLDAMKKLRPNDKPPHLVLNQVGLPKRPEIAPDEFCASLE
CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCC
VEAAAIIPFDAVLFGNASNSGRMIAEIDRKSPAAETFSQLSHLLTGRTAAKKARRGGLGK
CCEEEECCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHCCCHHH
VLAKLGKR
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA