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The map label for this gene is 150398540

Identifier: 150398540

GI number: 150398540

Start: 3549564

End: 3550373

Strand: Direct

Name: 150398540

Synonym: Smed_3351

Alternate gene names: NA

Gene position: 3549564-3550373 (Clockwise)

Preceding gene: 150398539

Following gene: 150398541

Centisome position: 93.86

GC content: 64.69

Gene sequence:

>810_bases
ATGAAACCGGTGCGCATTATCATTCTGGCCGTGGCGGTCGGCTCGGCTGCCATGGCCGGGCTGCTGGCGATGAAGCTTAC
CCGCGCGCCCGCCGCCCGAATGGCGGAACCGGTCATCGAGCAGGCGCCGACGATCAACGTGCTCGTTGCCGGCAAGAGCC
TGCCCGTCGGCTCCCGTCTCGGCGCCGATTCCATTCACTGGAAAGCCTGGCCGAAGGACGGCATCGCCGAAGGCATGATT
ACAGAGGAAACACGTCCCTCTGCCGTCGACGACCTTGCCGGCGCGGTCGTCCGCCTGCCGATCTTCACCGGGGAGCCGGT
CCGTCAGGAAAAGATCGCCGATGCATCGAACCGGATCATGTCGTCGCTGTTGCCGGCCGGAAAGCGGGCGGTGGCGACGG
AAATCACGGTCGCGACCGGTGCGGGCGGATTCATCCTGCCGAACGATCGCGTCGACGTCATCATGGTGCGCAAGTCCGAC
GGCGATCTCTATCTGACGGAAACCGTCCTCAGCAATGTGCGCGTGCTCGCGATCGACCAGCAGATCGAGGAGAAGGAGGA
CGGCACAAAGGCCGTCGTCGGCACGACTGCGACGCTGGAACTCACGCCGGATCAGTCGAAAGTCATGACGGTGACGCAGC
AGATGGCGGACCGCATCTCGCTGGCGCTCCGCAGCGTCGCCGACGCGCAGGAGCCGGACACCACGGCTGCCGACCACCTT
CTCAACGGCGACGGCCAACCAAGCATTCAGGTCATCAAGTCGGGCTCCATCGTCAAGGGCGACGGTGTGGCTCTCCAGAA
TCAGAAGTAG

Upstream 100 bases:

>100_bases
ATAAGCAAGTTAACCATATCCATAAGCAGACCGTTAACCATAACTACACCAATTCCTGATCAACCTGATCCCGGGCAATT
TTCTGGGGTTCGGGGCGATC

Downstream 100 bases:

>100_bases
GACGGGGCGCAAGGTGAAACGGATCGAAAACAGGTTTCGGGCGTCTCTCGCAGCCGGCTTCTCCTTCTGGCTGATTTTCT
CGGGCATGGCGCTGCCGACG

Product: SAF domain-containing protein

Products: NA

Alternate protein names: Flp Pilus Assembly CpaB; Pilus Assembly Protein CpaB; SAF Domain-Containing Protein; Pilus Assembly Protein; Pilus Assembly Transmembrane Protein; Flp Pilus Assembly Protein; CtpC Protein; Flp Pilus Assembly Protein Cpab; Flp Pilus Assembly Protein RcpC/CpaB; CpaB Pilus Assembly Protein; Pilus Assembly-Related Exported Protein; Pilus Assembly Domain-Containing Protein; CpaB2 Pilus Assembly Protein; CpaB2 Flp Pilus Assembly Protein CpaB; Component Of Type IV Pilus; Flp Pilus Assembly Protein CpaB-Like Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKPVRIIILAVAVGSAAMAGLLAMKLTRAPAARMAEPVIEQAPTINVLVAGKSLPVGSRLGADSIHWKAWPKDGIAEGMI
TEETRPSAVDDLAGAVVRLPIFTGEPVRQEKIADASNRIMSSLLPAGKRAVATEITVATGAGGFILPNDRVDVIMVRKSD
GDLYLTETVLSNVRVLAIDQQIEEKEDGTKAVVGTTATLELTPDQSKVMTVTQQMADRISLALRSVADAQEPDTTAADHL
LNGDGQPSIQVIKSGSIVKGDGVALQNQK

Sequences:

>Translated_269_residues
MKPVRIIILAVAVGSAAMAGLLAMKLTRAPAARMAEPVIEQAPTINVLVAGKSLPVGSRLGADSIHWKAWPKDGIAEGMI
TEETRPSAVDDLAGAVVRLPIFTGEPVRQEKIADASNRIMSSLLPAGKRAVATEITVATGAGGFILPNDRVDVIMVRKSD
GDLYLTETVLSNVRVLAIDQQIEEKEDGTKAVVGTTATLELTPDQSKVMTVTQQMADRISLALRSVADAQEPDTTAADHL
LNGDGQPSIQVIKSGSIVKGDGVALQNQK
>Mature_269_residues
MKPVRIIILAVAVGSAAMAGLLAMKLTRAPAARMAEPVIEQAPTINVLVAGKSLPVGSRLGADSIHWKAWPKDGIAEGMI
TEETRPSAVDDLAGAVVRLPIFTGEPVRQEKIADASNRIMSSLLPAGKRAVATEITVATGAGGFILPNDRVDVIMVRKSD
GDLYLTETVLSNVRVLAIDQQIEEKEDGTKAVVGTTATLELTPDQSKVMTVTQQMADRISLALRSVADAQEPDTTAADHL
LNGDGQPSIQVIKSGSIVKGDGVALQNQK

Specific function: Unknown

COG id: COG3745

COG function: function code U; Flp pilus assembly protein CpaB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28288; Mature: 28288

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPVRIIILAVAVGSAAMAGLLAMKLTRAPAARMAEPVIEQAPTINVLVAGKSLPVGSRL
CCCCEEEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCC
GADSIHWKAWPKDGIAEGMITEETRPSAVDDLAGAVVRLPIFTGEPVRQEKIADASNRIM
CCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHH
SSLLPAGKRAVATEITVATGAGGFILPNDRVDVIMVRKSDGDLYLTETVLSNVRVLAIDQ
HHHCCCCCCEEEEEEEEEECCCCEEECCCCEEEEEEEECCCCEEEEHHHHCCCEEEEECC
QIEEKEDGTKAVVGTTATLELTPDQSKVMTVTQQMADRISLALRSVADAQEPDTTAADHL
HHHHCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LNGDGQPSIQVIKSGSIVKGDGVALQNQK
HCCCCCCCEEEEECCCEEECCCEEECCCC
>Mature Secondary Structure
MKPVRIIILAVAVGSAAMAGLLAMKLTRAPAARMAEPVIEQAPTINVLVAGKSLPVGSRL
CCCCEEEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCC
GADSIHWKAWPKDGIAEGMITEETRPSAVDDLAGAVVRLPIFTGEPVRQEKIADASNRIM
CCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHH
SSLLPAGKRAVATEITVATGAGGFILPNDRVDVIMVRKSDGDLYLTETVLSNVRVLAIDQ
HHHCCCCCCEEEEEEEEEECCCCEEECCCCEEEEEEEECCCCEEEEHHHHCCCEEEEECC
QIEEKEDGTKAVVGTTATLELTPDQSKVMTVTQQMADRISLALRSVADAQEPDTTAADHL
HHHHCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LNGDGQPSIQVIKSGSIVKGDGVALQNQK
HCCCCCCCEEEEECCCEEECCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA