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The map label for this gene is 150398539

Identifier: 150398539

GI number: 150398539

Start: 3548902

End: 3549414

Strand: Direct

Name: 150398539

Synonym: Smed_3350

Alternate gene names: NA

Gene position: 3548902-3549414 (Clockwise)

Preceding gene: 150398538

Following gene: 150398540

Centisome position: 93.84

GC content: 54.97

Gene sequence:

>513_bases
GTGACTATCGCAGCGATCTTTGTAGTTTTCCCATTTTGCCTGGCATTTGCAGCGTTCTCGGACCTGTTCACAATGACAAT
TCCGAACCGCATATCGGCAATCGTGCTTGTTTCTTTCGTCGTTATCTCACCTTTAGCCGGCCTCGACGCATCCAAGGCAT
GCTTGCATGTGGCAGCTGCTGTGCTGGTATTTGGAGCTTGCTTCTGCCTTTTCGCAGTGAATGTCATGGGAGGCGGTGAC
GCAAAACTCCTTACGGCAAGTGCGATTTGGTTCGGTTTCGAGGCGTCCCTGATTGATTTTCTCTTGTATGTCTCCGCCTT
CGGCGGTCTGTTGACGATCGCCGTTCTTCTCCTGCGCAGCCAGGAAAACCTGATCCTTGCCGCGCGCATCCCGGTTCCGC
GCTTGCTGCTGACGGCGAAGAAAATCCCATACGGCATCGCCATAGCGCTGGGCGGGTTCGCCGCCTATCCTTCTTCGCCG
CTGATGAAGCTGGCCCTCACACAGTTCTCCTGA

Upstream 100 bases:

>100_bases
TCCAGCGCCGTGATCGCTGGCTTTTTTCCGAAAGGCCGCCTTTTCGAGGCGGCCTTTCGGTGTTGCAGGTGACGTCAGCT
GTTTCAGATTGGTAGCCCAG

Downstream 100 bases:

>100_bases
AGCGCATTCCGCCTCTCGGCCGCGCCACAGCCTTCTGTTAATCATCTTCATAAGCAAGTTAACCATATCCATAAGCAGAC
CGTTAACCATAACTACACCA

Product: peptidase A24A prepilin type IV

Products: NA

Alternate protein names: Type IV Prepilin Peptidase CpaA; Prepilin Peptidase Protein; CpaA2 Pilus Assembly Protein; Pilus Assembly Protein Prepilin Peptidase Subunit; Pilus Assembly Protein; Flp Pilus Assembly Protein Protease CpaA; Component Of Type IV Pilus Prepilin Peptidase Protein; Pilus Assembly Transmembrane Protein; Pilus Assembly Prepilin Peptidase CpaA; Components Of Type IV Pilus Prepilin Peptidase

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MTIAAIFVVFPFCLAFAAFSDLFTMTIPNRISAIVLVSFVVISPLAGLDASKACLHVAAAVLVFGACFCLFAVNVMGGGD
AKLLTASAIWFGFEASLIDFLLYVSAFGGLLTIAVLLLRSQENLILAARIPVPRLLLTAKKIPYGIAIALGGFAAYPSSP
LMKLALTQFS

Sequences:

>Translated_170_residues
MTIAAIFVVFPFCLAFAAFSDLFTMTIPNRISAIVLVSFVVISPLAGLDASKACLHVAAAVLVFGACFCLFAVNVMGGGD
AKLLTASAIWFGFEASLIDFLLYVSAFGGLLTIAVLLLRSQENLILAARIPVPRLLLTAKKIPYGIAIALGGFAAYPSSP
LMKLALTQFS
>Mature_169_residues
TIAAIFVVFPFCLAFAAFSDLFTMTIPNRISAIVLVSFVVISPLAGLDASKACLHVAAAVLVFGACFCLFAVNVMGGGDA
KLLTASAIWFGFEASLIDFLLYVSAFGGLLTIAVLLLRSQENLILAARIPVPRLLLTAKKIPYGIAIALGGFAAYPSSPL
MKLALTQFS

Specific function: Unknown

COG id: COG4960

COG function: function code OU; Flp pilus assembly protein, protease CpaA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.23.43

Molecular weight: Translated: 17881; Mature: 17750

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIAAIFVVFPFCLAFAAFSDLFTMTIPNRISAIVLVSFVVISPLAGLDASKACLHVAAA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VLVFGACFCLFAVNVMGGGDAKLLTASAIWFGFEASLIDFLLYVSAFGGLLTIAVLLLRS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QENLILAARIPVPRLLLTAKKIPYGIAIALGGFAAYPSSPLMKLALTQFS
CCCEEEEECCCHHHHHHHHHHCCCHHHHEECCHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TIAAIFVVFPFCLAFAAFSDLFTMTIPNRISAIVLVSFVVISPLAGLDASKACLHVAAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VLVFGACFCLFAVNVMGGGDAKLLTASAIWFGFEASLIDFLLYVSAFGGLLTIAVLLLRS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QENLILAARIPVPRLLLTAKKIPYGIAIALGGFAAYPSSPLMKLALTQFS
CCCEEEEECCCHHHHHHHHHHCCCHHHHEECCHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA