Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
---|---|
Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is aacA4 [H]
Identifier: 150398457
GI number: 150398457
Start: 3443673
End: 3444191
Strand: Direct
Name: aacA4 [H]
Synonym: Smed_3265
Alternate gene names: 150398457
Gene position: 3443673-3444191 (Clockwise)
Preceding gene: 150398456
Following gene: 150398458
Centisome position: 91.06
GC content: 61.85
Gene sequence:
>519_bases ATGCCGAATGAGCCGGCGGAGGTCAGCTTCGAGCCGGTGGCCGAGCGCCATCTGCCGATGCTCCTTGCCTGGCTTTCAGA GCCGCATGTCCGGCAGTGGTGGGGCGATCCCGATGTGGAACTTGAACTGATACGGGACGGTTGTGCGAAGGGCGAGGTCG ATGGTTTCGTCTTTCATGTGAAGGGAGCACCGACGGGCTACATTCAGGCTTGGGTGCCTTCGGAATATGACGAGGAGCCC TGGGCCAAGGACCTGTCGGCCGATACGCCCGGCGTCGACATCTTCATCGGGCCTCCTGAAATGACCGGCAAGGGCGTCGC GGCTCTGGCGCTCAGGGCCTTTGCCGCAAGACTGTTCGAAAACGGCGCTGCCCGCATCGTCATCGACCCCGATGCCGGCA ATCGCCGCGCCGTCCGCGCCTATTCGAAGGCCGGTTTCGTACCCTTTGGCGAATGGATCGACAAGTCCGGTCGAACCCTC CTTATGGAGCTCAAGCGGACGGAATTTGAGAGGAATTGA
Upstream 100 bases:
>100_bases GATACCGACAGGTCGGCCGAGGAGATCGCCCGCCGGGCGCTCGAGATCGCCGGCGACATATGCGTTTACACGAACCACAA TGTCGTCTTGGAGACGCTGG
Downstream 100 bases:
>100_bases TGAGCAGTTTTTCACCCAGGGAAATCGTATCGGAACTCGACCGCTACATTATCGGCCAGAAGGACGCGAAGCGCGCCGTT GCCATTGCGCTGCGCAACCG
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: AAC(6'); Amikacin resistance protein [H]
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MPNEPAEVSFEPVAERHLPMLLAWLSEPHVRQWWGDPDVELELIRDGCAKGEVDGFVFHVKGAPTGYIQAWVPSEYDEEP WAKDLSADTPGVDIFIGPPEMTGKGVAALALRAFAARLFENGAARIVIDPDAGNRRAVRAYSKAGFVPFGEWIDKSGRTL LMELKRTEFERN
Sequences:
>Translated_172_residues MPNEPAEVSFEPVAERHLPMLLAWLSEPHVRQWWGDPDVELELIRDGCAKGEVDGFVFHVKGAPTGYIQAWVPSEYDEEP WAKDLSADTPGVDIFIGPPEMTGKGVAALALRAFAARLFENGAARIVIDPDAGNRRAVRAYSKAGFVPFGEWIDKSGRTL LMELKRTEFERN >Mature_171_residues PNEPAEVSFEPVAERHLPMLLAWLSEPHVRQWWGDPDVELELIRDGCAKGEVDGFVFHVKGAPTGYIQAWVPSEYDEEPW AKDLSADTPGVDIFIGPPEMTGKGVAALALRAFAARLFENGAARIVIDPDAGNRRAVRAYSKAGFVPFGEWIDKSGRTLL MELKRTEFERN
Specific function: Resistance to antibiotics containing the purpurosamine ring including gentamicin, kanamycin, tobramycin, and neomycin [H]
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR019432 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF10331 AlcB [H]
EC number: =2.3.1.82 [H]
Molecular weight: Translated: 19151; Mature: 19020
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNEPAEVSFEPVAERHLPMLLAWLSEPHVRQWWGDPDVELELIRDGCAKGEVDGFVFHV CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEE KGAPTGYIQAWVPSEYDEEPWAKDLSADTPGVDIFIGPPEMTGKGVAALALRAFAARLFE CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH NGAARIVIDPDAGNRRAVRAYSKAGFVPFGEWIDKSGRTLLMELKRTEFERN CCCEEEEECCCCCCCHHEEHHHHCCCCCCHHHHCCCCCEEEHHHHHHHCCCC >Mature Secondary Structure PNEPAEVSFEPVAERHLPMLLAWLSEPHVRQWWGDPDVELELIRDGCAKGEVDGFVFHV CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEE KGAPTGYIQAWVPSEYDEEPWAKDLSADTPGVDIFIGPPEMTGKGVAALALRAFAARLFE CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH NGAARIVIDPDAGNRRAVRAYSKAGFVPFGEWIDKSGRTLLMELKRTEFERN CCCEEEEECCCCCCCHHEEHHHHCCCCCCHHHHCCCCCEEEHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2841303; 1963948 [H]