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The map label for this gene is yfcA [C]

Identifier: 150398294

GI number: 150398294

Start: 3245790

End: 3246536

Strand: Reverse

Name: yfcA [C]

Synonym: Smed_3100

Alternate gene names: 150398294

Gene position: 3246536-3245790 (Counterclockwise)

Preceding gene: 150398298

Following gene: 150398288

Centisome position: 85.84

GC content: 64.79

Gene sequence:

>747_bases
ATGACGTTATTCCAGATCTTCTTGCTCTTCGTTGCAGGGTTCCTGTCCGGCGTGGTCAACGCTATTGCCGGCGGCGGCAC
CTTCCTGACTTTCGGCGCCATGACGCTTGCAGGCCTGCCGCCTATCGTTGCCAACGCCACTTCCTCCATCATTCAGTTCC
CCGGCTACATCACCTCGGCGCTTGCCTATGCCAAGGAAATCCGGGCCGACCGGAAGAACGCGCTCGTCCTCGCCGTCATC
TCGGCGGTCGGAGGTCTTGCCGGCGCGCTGCTTCTCCTGTCGCTCTCCAATCCGGCTTTTCGTCAGATGGTGCCCTGGCT
GCTGATCGCCGCGACAGCGATCTTCGCGGCCGGTCCGCTGCTGAAGCCGAAGGCGCGCAGCGACGAGCACCGCATCGGGC
CGCTCGGTGTGGCGAGCCAGTTGGTCACCTCCGTCTATGGCGGCTTCTTCGGCGCCGGCATGGGGATCATGATGCTTGCC
GTTCTCGGGCTTGCGACCGGCGGCGGCTACCACCGGCTGAACGCGCTCAAGAACTTCATCTCCATCATCATCGCCGCGAT
CGCGATCGTGGTTTTCACCGCGGGCGGGGTCGTCTCCTGGCTGCATGCGGCGATCATGGTGCCGGGCGCAGCCCTCGGCG
GCTATATGGGCGTATGGGCGGCACGCCGCGTTCCGCAGTCGGTGATACGCGCCGTGGTCGTGGCAGTGGGGCTCCTGCTG
GCCGCCTATTACTTCTTCACGGGTTGA

Upstream 100 bases:

>100_bases
AACGTTACGATCGCAACTTAAGCCGCCGCCGAGATCGGGGGGCGGGGTTGCGGGCGAACGCGCCACCCGCTATCCCCGAT
TCACGCGTTCGGGGGAAGCC

Downstream 100 bases:

>100_bases
GCCGGATCAGGCTGCGGTTTCAGATCACGCTCCAGGAGGTCCGGCCGGCGCTCGGCGGTCAGCCGGCGGGCGGCGACCAA
TCGCCATTGGGCTATAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF9 [H]

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MTLFQIFLLFVAGFLSGVVNAIAGGGTFLTFGAMTLAGLPPIVANATSSIIQFPGYITSALAYAKEIRADRKNALVLAVI
SAVGGLAGALLLLSLSNPAFRQMVPWLLIAATAIFAAGPLLKPKARSDEHRIGPLGVASQLVTSVYGGFFGAGMGIMMLA
VLGLATGGGYHRLNALKNFISIIIAAIAIVVFTAGGVVSWLHAAIMVPGAALGGYMGVWAARRVPQSVIRAVVVAVGLLL
AAYYFFTG

Sequences:

>Translated_248_residues
MTLFQIFLLFVAGFLSGVVNAIAGGGTFLTFGAMTLAGLPPIVANATSSIIQFPGYITSALAYAKEIRADRKNALVLAVI
SAVGGLAGALLLLSLSNPAFRQMVPWLLIAATAIFAAGPLLKPKARSDEHRIGPLGVASQLVTSVYGGFFGAGMGIMMLA
VLGLATGGGYHRLNALKNFISIIIAAIAIVVFTAGGVVSWLHAAIMVPGAALGGYMGVWAARRVPQSVIRAVVVAVGLLL
AAYYFFTG
>Mature_247_residues
TLFQIFLLFVAGFLSGVVNAIAGGGTFLTFGAMTLAGLPPIVANATSSIIQFPGYITSALAYAKEIRADRKNALVLAVIS
AVGGLAGALLLLSLSNPAFRQMVPWLLIAATAIFAAGPLLKPKARSDEHRIGPLGVASQLVTSVYGGFFGAGMGIMMLAV
LGLATGGGYHRLNALKNFISIIIAAIAIVVFTAGGVVSWLHAAIMVPGAALGGYMGVWAARRVPQSVIRAVVVAVGLLLA
AYYFFTG

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=247, Percent_Identity=25.5060728744939, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 25481; Mature: 25350

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCC
>Mature Secondary Structure 
TLFQIFLLFVAGFLSGVVNAIAGGGTFLTFGAMTLAGLPPIVANATSSIIQFPGYITSA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHH
LAYAKEIRADRKNALVLAVISAVGGLAGALLLLSLSNPAFRQMVPWLLIAATAIFAAGPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
LKPKARSDEHRIGPLGVASQLVTSVYGGFFGAGMGIMMLAVLGLATGGGYHRLNALKNFI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SIIIAAIAIVVFTAGGVVSWLHAAIMVPGAALGGYMGVWAARRVPQSVIRAVVVAVGLLL
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAYYFFTG
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655697 [H]