Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
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Accession | NC_009636 |
Length | 3,781,904 |
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The map label for this gene is 150396065
Identifier: 150396065
GI number: 150396065
Start: 899914
End: 900327
Strand: Direct
Name: 150396065
Synonym: Smed_0841
Alternate gene names: NA
Gene position: 899914-900327 (Clockwise)
Preceding gene: 150396064
Following gene: 150396066
Centisome position: 23.8
GC content: 54.11
Gene sequence:
>414_bases TTGTCCTGTCAAAGCTTTGGGTCGGAGTGGTCGTGGCGCTCCTTGCCTGCGAAGCCACTGCCTCCGCACAGGGGGCTGTC GAGATCGAGGCGCCGATCGTGCGGATTTTCGAGTTTTGTGGTGGTCTCCGACGACCTTGAGGCTTTCATGGTGGCCGGGA GAAAGAATGTTCAGACCTCCGTACGCGACGAACCAGGAGTTCTCTCGATGCATTGTGTCGCGGATAAGAGTGACCCGACG AAGCTCTATGTTGTCGAGGTCTATGAAGATGAAGATGCGTACCGTTCCCATGTCGAGTCGGCGCATTTCAGAGACTTCAT CAATGCAATCAAGGGAAAGGTGATCTCAAGGCGTGTCATCGAGACCAACCCGAAAATGGTTGGCTCCAAACAGTTTGCTT GGACTGAGCAGTAA
Upstream 100 bases:
>100_bases AGAACATGATCACGTCGCGCAAGCTCTTCGAGACGGACAACTTCCAGCTCAGCGCCAAGCGGTGATGAGCAGATGAACCG GAACGAGTGCAGTTTGCGAT
Downstream 100 bases:
>100_bases AAATGCGGGTGAGATAGTGATGACTGATCGACCTGGAAACGACGTTTCCGCGCGTTACGCTACAATGACCAATCGTCGCA CATTGCTTGGCGCCGGTCTC
Product: antibiotic biosynthesis monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSCQSFGSEWSWRSLPAKPLPPHRGLSRSRRRSCGFSSFVVVSDDLEAFMVAGRKNVQTSVRDEPGVLSMHCVADKSDPT KLYVVEVYEDEDAYRSHVESAHFRDFINAIKGKVISRRVIETNPKMVGSKQFAWTEQ
Sequences:
>Translated_137_residues MSCQSFGSEWSWRSLPAKPLPPHRGLSRSRRRSCGFSSFVVVSDDLEAFMVAGRKNVQTSVRDEPGVLSMHCVADKSDPT KLYVVEVYEDEDAYRSHVESAHFRDFINAIKGKVISRRVIETNPKMVGSKQFAWTEQ >Mature_136_residues SCQSFGSEWSWRSLPAKPLPPHRGLSRSRRRSCGFSSFVVVSDDLEAFMVAGRKNVQTSVRDEPGVLSMHCVADKSDPTK LYVVEVYEDEDAYRSHVESAHFRDFINAIKGKVISRRVIETNPKMVGSKQFAWTEQ
Specific function: Unknown
COG id: COG1359
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15555; Mature: 15424
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCQSFGSEWSWRSLPAKPLPPHRGLSRSRRRSCGFSSFVVVSDDLEAFMVAGRKNVQTS CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCHHHHHHCCCCCCCCC VRDEPGVLSMHCVADKSDPTKLYVVEVYEDEDAYRSHVESAHFRDFINAIKGKVISRRVI CCCCCCEEEEEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETNPKMVGSKQFAWTEQ HCCCCCCCCCCCEECCC >Mature Secondary Structure SCQSFGSEWSWRSLPAKPLPPHRGLSRSRRRSCGFSSFVVVSDDLEAFMVAGRKNVQTS CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCHHHHHHCCCCCCCCC VRDEPGVLSMHCVADKSDPTKLYVVEVYEDEDAYRSHVESAHFRDFINAIKGKVISRRVI CCCCCCEEEEEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETNPKMVGSKQFAWTEQ HCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA