Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

Click here to switch to the map view.

The map label for this gene is 150396064

Identifier: 150396064

GI number: 150396064

Start: 899489

End: 899878

Strand: Direct

Name: 150396064

Synonym: Smed_0840

Alternate gene names: NA

Gene position: 899489-899878 (Clockwise)

Preceding gene: 150396060

Following gene: 150396065

Centisome position: 23.78

GC content: 60.26

Gene sequence:

>390_bases
ATGGGCTTGAAAAGTCTTCTCATCGTCGCAGCCTTGATCATCGCTCCGCTTGCCGTCCAACCGGTCGCCGCACAGGAGGC
GAAGGGTCCCGTGATCCGGATCGCGGAACTAGAAATCGACCCGGCGCAGATGGCCGCCTACTCGGCCGCCGTGAAAGAGG
AGATGGAGGAATCCATCCGCGTCGAGCCGGGCGTCCTGGCGCTTTACGCGGTGTCGATCAAGGGTCAGCCGAATCATCTC
AGATTCTTCGAGATGTATGCCGACCAGGCCGCCTACGAGGCCCACCGGGAATCGCCGCATTTCAGGAAATACGTCGAGAC
CACCAAGAACATGATCACGTCGCGCAAGCTCTTCGAGACGGACAACTTCCAGCTCAGCGCCAAGCGGTGA

Upstream 100 bases:

>100_bases
CTCATATTGACGTCTAATCGAAACAAACGGCGAGGTCTATATTTCATCGTACAGGAGGCACTGGCGTCTTCGGAAACCAA
AATCAGTTCGGAGCCGTGTC

Downstream 100 bases:

>100_bases
TGAGCAGATGAACCGGAACGAGTGCAGTTTGCGATTTGTCCTGTCAAAGCTTTGGGTCGGAGTGGTCGTGGCGCTCCTTG
CCTGCGAAGCCACTGCCTCC

Product: antibiotic biosynthesis monooxygenase

Products: NA

Alternate protein names: Flavoredoxin; Antibiotic Biosynthesis Monooxygenase Protein; Carboxymuconolactone Decarboxylase

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MGLKSLLIVAALIIAPLAVQPVAAQEAKGPVIRIAELEIDPAQMAAYSAAVKEEMEESIRVEPGVLALYAVSIKGQPNHL
RFFEMYADQAAYEAHRESPHFRKYVETTKNMITSRKLFETDNFQLSAKR

Sequences:

>Translated_129_residues
MGLKSLLIVAALIIAPLAVQPVAAQEAKGPVIRIAELEIDPAQMAAYSAAVKEEMEESIRVEPGVLALYAVSIKGQPNHL
RFFEMYADQAAYEAHRESPHFRKYVETTKNMITSRKLFETDNFQLSAKR
>Mature_128_residues
GLKSLLIVAALIIAPLAVQPVAAQEAKGPVIRIAELEIDPAQMAAYSAAVKEEMEESIRVEPGVLALYAVSIKGQPNHLR
FFEMYADQAAYEAHRESPHFRKYVETTKNMITSRKLFETDNFQLSAKR

Specific function: Unknown

COG id: COG1359

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14390; Mature: 14259

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLKSLLIVAALIIAPLAVQPVAAQEAKGPVIRIAELEIDPAQMAAYSAAVKEEMEESIR
CCHHHHHHHHHHHHHHHHCCCCCHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHC
VEPGVLALYAVSIKGQPNHLRFFEMYADQAAYEAHRESPHFRKYVETTKNMITSRKLFET
CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
DNFQLSAKR
CCEEEEECC
>Mature Secondary Structure 
GLKSLLIVAALIIAPLAVQPVAAQEAKGPVIRIAELEIDPAQMAAYSAAVKEEMEESIR
CHHHHHHHHHHHHHHHHCCCCCHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHC
VEPGVLALYAVSIKGQPNHLRFFEMYADQAAYEAHRESPHFRKYVETTKNMITSRKLFET
CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
DNFQLSAKR
CCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA