| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is mrpA [H]
Identifier: 150395831
GI number: 150395831
Start: 655816
End: 658191
Strand: Direct
Name: mrpA [H]
Synonym: Smed_0607
Alternate gene names: 150395831
Gene position: 655816-658191 (Clockwise)
Preceding gene: 150395829
Following gene: 150395832
Centisome position: 17.34
GC content: 62.42
Gene sequence:
>2376_bases ATGGATGCCGCGGCCCTGACATTTCTGGCCCTCGGTCTTCCCTTTGCCGCGGCCCTCATCGCACCGGCCCTCACTCGGTT CCTCGGCGGGAATGCTGCCTGGCTCCTGGCGCTTGCGCCATTCGCGATCTTCGTTCATTTCGCCGGCTTCGTTCCGGAAG TCGCCGCTGGCGAAATCGTCACCGGCGGCTATGCCTGGATACCGTCGTTCAACGTCAGCTTCTCCTGGCTGATCGATGGC TTGTCGCTTACCTTCGCTCTTCTGATTTCGGGCATCGGGACCCTGATCGTCCTTTATTCGGGCGGCTATCTGAAGGGACA TCCCGATCAGGGCCGCTTCTTCTCGTTCATCCTGATGTTCATGGGATCGATGCAGGGGCTGGTCGTGTCGGACAGCTTCC TGATGCTCTTCGTCTTTTGGGAACTGACGTCCATCACTTCGTTCCTGCTGATCGGCTTCGATCACCGGCGCGAGGCGGCG CGCCGCGCGGCTTTGCAGGCCCTGGTGGTCACGGGCGGAGGCGGGCTCGCCTTGCTGGCCGGGCTTATCATCATCTGGAA CGTCAGCGGCGTCACCCAATTCTCGCTGCTCCTGACGTTCGGCGACGAACTGAAGGAGAGCCCGTTCTATCTCGCAGCAC TGCTCCTTGTCCTCGGCGGCGCCTTCACCAAGTCGGCACAGTTTCCGTTTCACTTCTGGCTGCCGAATGCCATGGAGGCG CCGACTCCGGTCTCGGCTTACCTGCATTCGGCGACGATGGTGAAGGCGGGCGTCTATCTTCTCATGCGGCTCAACCCGGT GCTCGGCGGCACGACCGAGTGGCAGGTCCTGCTGCCGCTTTTCGGTGTGACGACCCTTATTGCCGGAGCTGCGCTGGCCG TGCGCCAAACGGATCTCAAAATGATGCTGGCCTATACGACGATGTCGTCGCTCGGCCTGCTGGTCATGTTGACCGGGCTC GGCTTGCCCTATGCGATCGAAGCCGCCGTGCTCTATCTGGTGGCGCATGCCCTTTTCAAGGGGGCCCTGTTCATGGTGGC CGGCATCATCGACCATGAAACCGGTACGCGCGACCTGACGAAGCTCGGCGGCCTGCGCACGGCGATGCCGTTGACCTTTG TCATAGCTCTTACGGCGGCCTTGTCGATGGGGGGGCTGCCGCCCTTTTTCGGGTTCCTTGCAAAAGAGGAAATCTACACC GCACTCTCCGGTTTCGACCGCCGTTCCATGGTTTTCGCGGCATTGACCATTCTCGGCAATGGGCTGATGTTCGCCGTCGG ATTTGCGATCGCCCTGAAGCCGTTTCTCGGCCCGAAGGTCGACACGCCCAAGCCTCCCCACGAGGCTCCGGTGCTCCTCT GGCTAGGTCCGGCCATTCTGGCCGCAAAAGGTCTTTCAATGGCCCTGATGTCGGGCTTCGTTCATCGCTACGTGACCTCG CCCATGGCGTCGGCCGTCGCCGGCGAGCCGAGAAGCGCCACGATATCGCTGGTGCCGCATTTCGGCGTGGCGCTGTTGCT TTCCGTCGCGACGCTGGCGGTCGGCGTCGTTCTGTTCCTCAATCTGGCTCGGCTGCGCGCGGCCATGGTGGCGGTTCTTG CGGATATCGGCTGGGGACCCGATCGGGGCTTCGACCAGTTCATGCGTGGCCTCGTGCGCTTTGCGGTCACCGCCACCCGT CGACTGCAGGGGGGCCGGCTCGACACCTATATGACCATGACCTTCGTGCTGGTCGCCGCCGTCATGCTGGCGTTGCCGCT GCGCTATGGCGAATTCCCGCGCGCGCCGTTCTTTCCGGCGGACGTTCCGCTCCACGAATTCGCGATCATGGCGATCGCAG CCCTTGGCCTCTTCGCCGTGGTGATGGCCGCGGATCGGCTGACGGCGATCGTCTCCCTCGGCATTCAGGGCTTTGCCGTG GCGATGCTCTTTCTGCTTTACGGCGCCCCCGATCTTGCCTTCACCCAATTCATGATAGAGACACTGTCGGTCGTCGTTCT GGCGCTGGTGATGACGCGGTTGCGGCTGTCTCCCTCGGACCACAGGCCGCTCAGACAGAAGCTGCCCGACTTTACAATCG CGCTCGCCTGCGGAGCCGGGTTCGGTCTTTTCCTCCTGAGGGTCACCGGCGTGCCGTTCGATTCGACGCTGACGGACTTT TTCAATCTCTATTCGAAGTCGATCGCGCACGGTGCAAATGTAGTCAACGTCATCATAGTCGACTTCCGCGGCACGGATAC GCTCGGCGAAATTGCGGTGGTGCTGGTTGCCGGCCTGTCAATCCTTTCGCTCGTGCGGCTGCGGGCGGGATCGTTGAAAC GTGGTGAGCTGACCGAGATTGCGGCCGCCGATGCGAGTTCGAAGGAGCTGGTATGA
Upstream 100 bases:
>100_bases CTTCGCAACGAGGCCGATTTCCCTTGAGGCGGGCCCGCCCTTCTTCTATGTCCGGTGGAAGATTGACTGAACGATCAATG AGAAGGAGCGTGTCGACACG
Downstream 100 bases:
>100_bases AGTCGATTATATTTCGGACCGTCGCCCCCTTCCTCACCGGATTGATGATGCTCTTTTCGATCTTCGTTCTGCTGCGCGGC CACAATGAACCCGGGGGCGG
Product: putative monovalent cation/H+ antiporter subunit A
Products: NAD+; ubiquinol [C]
Alternate protein names: Mrp complex subunit A; Multiple resistance and pH homeostasis protein A [H]
Number of amino acids: Translated: 791; Mature: 791
Protein sequence:
>791_residues MDAAALTFLALGLPFAAALIAPALTRFLGGNAAWLLALAPFAIFVHFAGFVPEVAAGEIVTGGYAWIPSFNVSFSWLIDG LSLTFALLISGIGTLIVLYSGGYLKGHPDQGRFFSFILMFMGSMQGLVVSDSFLMLFVFWELTSITSFLLIGFDHRREAA RRAALQALVVTGGGGLALLAGLIIIWNVSGVTQFSLLLTFGDELKESPFYLAALLLVLGGAFTKSAQFPFHFWLPNAMEA PTPVSAYLHSATMVKAGVYLLMRLNPVLGGTTEWQVLLPLFGVTTLIAGAALAVRQTDLKMMLAYTTMSSLGLLVMLTGL GLPYAIEAAVLYLVAHALFKGALFMVAGIIDHETGTRDLTKLGGLRTAMPLTFVIALTAALSMGGLPPFFGFLAKEEIYT ALSGFDRRSMVFAALTILGNGLMFAVGFAIALKPFLGPKVDTPKPPHEAPVLLWLGPAILAAKGLSMALMSGFVHRYVTS PMASAVAGEPRSATISLVPHFGVALLLSVATLAVGVVLFLNLARLRAAMVAVLADIGWGPDRGFDQFMRGLVRFAVTATR RLQGGRLDTYMTMTFVLVAAVMLALPLRYGEFPRAPFFPADVPLHEFAIMAIAALGLFAVVMAADRLTAIVSLGIQGFAV AMLFLLYGAPDLAFTQFMIETLSVVVLALVMTRLRLSPSDHRPLRQKLPDFTIALACGAGFGLFLLRVTGVPFDSTLTDF FNLYSKSIAHGANVVNVIIVDFRGTDTLGEIAVVLVAGLSILSLVRLRAGSLKRGELTEIAAADASSKELV
Sequences:
>Translated_791_residues MDAAALTFLALGLPFAAALIAPALTRFLGGNAAWLLALAPFAIFVHFAGFVPEVAAGEIVTGGYAWIPSFNVSFSWLIDG LSLTFALLISGIGTLIVLYSGGYLKGHPDQGRFFSFILMFMGSMQGLVVSDSFLMLFVFWELTSITSFLLIGFDHRREAA RRAALQALVVTGGGGLALLAGLIIIWNVSGVTQFSLLLTFGDELKESPFYLAALLLVLGGAFTKSAQFPFHFWLPNAMEA PTPVSAYLHSATMVKAGVYLLMRLNPVLGGTTEWQVLLPLFGVTTLIAGAALAVRQTDLKMMLAYTTMSSLGLLVMLTGL GLPYAIEAAVLYLVAHALFKGALFMVAGIIDHETGTRDLTKLGGLRTAMPLTFVIALTAALSMGGLPPFFGFLAKEEIYT ALSGFDRRSMVFAALTILGNGLMFAVGFAIALKPFLGPKVDTPKPPHEAPVLLWLGPAILAAKGLSMALMSGFVHRYVTS PMASAVAGEPRSATISLVPHFGVALLLSVATLAVGVVLFLNLARLRAAMVAVLADIGWGPDRGFDQFMRGLVRFAVTATR RLQGGRLDTYMTMTFVLVAAVMLALPLRYGEFPRAPFFPADVPLHEFAIMAIAALGLFAVVMAADRLTAIVSLGIQGFAV AMLFLLYGAPDLAFTQFMIETLSVVVLALVMTRLRLSPSDHRPLRQKLPDFTIALACGAGFGLFLLRVTGVPFDSTLTDF FNLYSKSIAHGANVVNVIIVDFRGTDTLGEIAVVLVAGLSILSLVRLRAGSLKRGELTEIAAADASSKELV >Mature_791_residues MDAAALTFLALGLPFAAALIAPALTRFLGGNAAWLLALAPFAIFVHFAGFVPEVAAGEIVTGGYAWIPSFNVSFSWLIDG LSLTFALLISGIGTLIVLYSGGYLKGHPDQGRFFSFILMFMGSMQGLVVSDSFLMLFVFWELTSITSFLLIGFDHRREAA RRAALQALVVTGGGGLALLAGLIIIWNVSGVTQFSLLLTFGDELKESPFYLAALLLVLGGAFTKSAQFPFHFWLPNAMEA PTPVSAYLHSATMVKAGVYLLMRLNPVLGGTTEWQVLLPLFGVTTLIAGAALAVRQTDLKMMLAYTTMSSLGLLVMLTGL GLPYAIEAAVLYLVAHALFKGALFMVAGIIDHETGTRDLTKLGGLRTAMPLTFVIALTAALSMGGLPPFFGFLAKEEIYT ALSGFDRRSMVFAALTILGNGLMFAVGFAIALKPFLGPKVDTPKPPHEAPVLLWLGPAILAAKGLSMALMSGFVHRYVTS PMASAVAGEPRSATISLVPHFGVALLLSVATLAVGVVLFLNLARLRAAMVAVLADIGWGPDRGFDQFMRGLVRFAVTATR RLQGGRLDTYMTMTFVLVAAVMLALPLRYGEFPRAPFFPADVPLHEFAIMAIAALGLFAVVMAADRLTAIVSLGIQGFAV AMLFLLYGAPDLAFTQFMIETLSVVVLALVMTRLRLSPSDHRPLRQKLPDFTIALACGAGFGLFLLRVTGVPFDSTLTDF FNLYSKSIAHGANVVNVIIVDFRGTDTLGEIAVVLVAGLSILSLVRLRAGSLKRGELTEIAAADASSKELV
Specific function: Mnh complex is a Na(+)Li(+)/H(+) antiporter involved in Na(+) and/or Li(+) excretion and Na(+) resistance. Na(+)/H(+) antiport consumes a transmembrane electrical potential, and is thus inferred to be electrogenic. Does not transport K(+), Ca(2+) or Mg(2+
COG id: COG1009
COG function: function code CP; NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CPA3 antiporters (TC 2.A.63) subunit A family [H]
Homologues:
Organism=Homo sapiens, GI251831117, Length=347, Percent_Identity=35.1585014409222, Blast_Score=179, Evalue=1e-44, Organism=Homo sapiens, GI251831116, Length=377, Percent_Identity=26.2599469496021, Blast_Score=83, Evalue=1e-15, Organism=Escherichia coli, GI1788614, Length=350, Percent_Identity=37.1428571428571, Blast_Score=202, Evalue=5e-53, Organism=Escherichia coli, GI1788829, Length=348, Percent_Identity=35.9195402298851, Blast_Score=180, Evalue=3e-46, Organism=Escherichia coli, GI1788831, Length=352, Percent_Identity=31.25, Blast_Score=136, Evalue=4e-33, Organism=Escherichia coli, GI1788613, Length=337, Percent_Identity=29.673590504451, Blast_Score=117, Evalue=4e-27, Organism=Escherichia coli, GI1788827, Length=439, Percent_Identity=25.9681093394077, Blast_Score=111, Evalue=2e-25, Organism=Escherichia coli, GI145693160, Length=330, Percent_Identity=26.6666666666667, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI2367154, Length=215, Percent_Identity=28.8372093023256, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005663 - InterPro: IPR001750 - InterPro: IPR001516 [H]
Pfam domain/function: PF00361 Oxidored_q1; PF00662 Oxidored_q1_N [H]
EC number: 1.6.99.5 [C]
Molecular weight: Translated: 84253; Mature: 84253
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAAALTFLALGLPFAAALIAPALTRFLGGNAAWLLALAPFAIFVHFAGFVPEVAAGEIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEE TGGYAWIPSFNVSFSWLIDGLSLTFALLISGIGTLIVLYSGGYLKGHPDQGRFFSFILMF ECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCEECCCCCCHHHHHHHHHH MGSMQGLVVSDSFLMLFVFWELTSITSFLLIGFDHRREAARRAALQALVVTGGGGLALLA HCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCHHHHHH GLIIIWNVSGVTQFSLLLTFGDELKESPFYLAALLLVLGGAFTKSAQFPFHFWLPNAMEA HHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC PTPVSAYLHSATMVKAGVYLLMRLNPVLGGTTEWQVLLPLFGVTTLIAGAALAVRQTDLK CCCHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MMLAYTTMSSLGLLVMLTGLGLPYAIEAAVLYLVAHALFKGALFMVAGIIDHETGTRDLT HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH KLGGLRTAMPLTFVIALTAALSMGGLPPFFGFLAKEEIYTALSGFDRRSMVFAALTILGN HHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC GLMFAVGFAIALKPFLGPKVDTPKPPHEAPVLLWLGPAILAAKGLSMALMSGFVHRYVTS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHHHHHCCHHHHHHHHHHHHHHHH PMASAVAGEPRSATISLVPHFGVALLLSVATLAVGVVLFLNLARLRAAMVAVLADIGWGP HHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DRGFDQFMRGLVRFAVTATRRLQGGRLDTYMTMTFVLVAAVMLALPLRYGEFPRAPFFPA CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DVPLHEFAIMAIAALGLFAVVMAADRLTAIVSLGIQGFAVAMLFLLYGAPDLAFTQFMIE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHH TLSVVVLALVMTRLRLSPSDHRPLRQKLPDFTIALACGAGFGLFLLRVTGVPFDSTLTDF HHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHHH FNLYSKSIAHGANVVNVIIVDFRGTDTLGEIAVVLVAGLSILSLVRLRAGSLKRGELTEI HHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH AAADASSKELV HHCCCCCCCCC >Mature Secondary Structure MDAAALTFLALGLPFAAALIAPALTRFLGGNAAWLLALAPFAIFVHFAGFVPEVAAGEIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEE TGGYAWIPSFNVSFSWLIDGLSLTFALLISGIGTLIVLYSGGYLKGHPDQGRFFSFILMF ECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCEECCCCCCHHHHHHHHHH MGSMQGLVVSDSFLMLFVFWELTSITSFLLIGFDHRREAARRAALQALVVTGGGGLALLA HCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCHHHHHH GLIIIWNVSGVTQFSLLLTFGDELKESPFYLAALLLVLGGAFTKSAQFPFHFWLPNAMEA HHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC PTPVSAYLHSATMVKAGVYLLMRLNPVLGGTTEWQVLLPLFGVTTLIAGAALAVRQTDLK CCCHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MMLAYTTMSSLGLLVMLTGLGLPYAIEAAVLYLVAHALFKGALFMVAGIIDHETGTRDLT HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH KLGGLRTAMPLTFVIALTAALSMGGLPPFFGFLAKEEIYTALSGFDRRSMVFAALTILGN HHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC GLMFAVGFAIALKPFLGPKVDTPKPPHEAPVLLWLGPAILAAKGLSMALMSGFVHRYVTS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHHHHHCCHHHHHHHHHHHHHHHH PMASAVAGEPRSATISLVPHFGVALLLSVATLAVGVVLFLNLARLRAAMVAVLADIGWGP HHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DRGFDQFMRGLVRFAVTATRRLQGGRLDTYMTMTFVLVAAVMLALPLRYGEFPRAPFFPA CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DVPLHEFAIMAIAALGLFAVVMAADRLTAIVSLGIQGFAVAMLFLLYGAPDLAFTQFMIE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHH TLSVVVLALVMTRLRLSPSDHRPLRQKLPDFTIALACGAGFGLFLLRVTGVPFDSTLTDF HHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHHH FNLYSKSIAHGANVVNVIIVDFRGTDTLGEIAVVLVAGLSILSLVRLRAGSLKRGELTEI HHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH AAADASSKELV HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Iron [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; ubiquinone [C]
Specific reaction: NADH + ubiquinone = NAD+ + ubiquinol [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11356194 [H]