| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is mrpB [H]
Identifier: 150395832
GI number: 150395832
Start: 658188
End: 658607
Strand: Direct
Name: mrpB [H]
Synonym: Smed_0608
Alternate gene names: 150395832
Gene position: 658188-658607 (Clockwise)
Preceding gene: 150395831
Following gene: 150395833
Centisome position: 17.4
GC content: 61.67
Gene sequence:
>420_bases ATGAAGTCGATTATATTTCGGACCGTCGCCCCCTTCCTCACCGGATTGATGATGCTCTTTTCGATCTTCGTTCTGCTGCG CGGCCACAATGAACCCGGGGGCGGGTTCATTGGCGGATTGATCGCCGTCTCGGCGCTAGCGATCTACGGCATCGCCCATG GTGTGGTCACGGTGCGGCGGGCAATATATTTTCACCCTATGGCGATTGCGGGCGCCGGCCTCTTCGCCGCGACCGTGGCC GGTCTGGTGTCCCTTTTCGCGCGGGTGCCGTTCATGACCGGGCTGTGGATATACCCGTCCGTGCTCGGCGTGGAAGTTCC GCTCTCCACCGTCATGCTGTTCGACACGGGCGTTTACCTGGTCGTCGTCGGTGCCATCAGCTCGATCGCACTCTCGCTTG AGGAAGGGGGAGGCGCCTGA
Upstream 100 bases:
>100_bases GCCTGTCAATCCTTTCGCTCGTGCGGCTGCGGGCGGGATCGTTGAAACGTGGTGAGCTGACCGAGATTGCGGCCGCCGAT GCGAGTTCGAAGGAGCTGGT
Downstream 100 bases:
>100_bases TGGAAACCTGGTTTTCCCTGCTGGTCACCCTCTTCTTCACCGTGGCCATTTACCTGCTTCTGTCGAAGTCAGTCATCCGC ATTCTGCTGGGCGTCGCGAT
Product: putative monovalent cation/H+ antiporter subunit B
Products: NA
Alternate protein names: Mrp complex subunit B; Multiple resistance and pH homeostasis protein B [H]
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MKSIIFRTVAPFLTGLMMLFSIFVLLRGHNEPGGGFIGGLIAVSALAIYGIAHGVVTVRRAIYFHPMAIAGAGLFAATVA GLVSLFARVPFMTGLWIYPSVLGVEVPLSTVMLFDTGVYLVVVGAISSIALSLEEGGGA
Sequences:
>Translated_139_residues MKSIIFRTVAPFLTGLMMLFSIFVLLRGHNEPGGGFIGGLIAVSALAIYGIAHGVVTVRRAIYFHPMAIAGAGLFAATVA GLVSLFARVPFMTGLWIYPSVLGVEVPLSTVMLFDTGVYLVVVGAISSIALSLEEGGGA >Mature_139_residues MKSIIFRTVAPFLTGLMMLFSIFVLLRGHNEPGGGFIGGLIAVSALAIYGIAHGVVTVRRAIYFHPMAIAGAGLFAATVA GLVSLFARVPFMTGLWIYPSVLGVEVPLSTVMLFDTGVYLVVVGAISSIALSLEEGGGA
Specific function: Mrp complex is a Na(+)/H(+) antiporter that is considered to be the major Na(+) excretion system in B.subtilis. Has a major role in Na(+) resistance and a minor role in Na(+)- and K(+)-dependent pH homeostasis as compared to TetB. MrpA may be the actual N
COG id: COG2111
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhB subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CPA3 antiporters (TC 2.A.63) subunit B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005281 - InterPro: IPR007182 [H]
Pfam domain/function: PF04039 MnhB [H]
EC number: NA
Molecular weight: Translated: 14445; Mature: 14445
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIIFRTVAPFLTGLMMLFSIFVLLRGHNEPGGGFIGGLIAVSALAIYGIAHGVVTVRR CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AIYFHPMAIAGAGLFAATVAGLVSLFARVPFMTGLWIYPSVLGVEVPLSTVMLFDTGVYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHH VVVGAISSIALSLEEGGGA HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKSIIFRTVAPFLTGLMMLFSIFVLLRGHNEPGGGFIGGLIAVSALAIYGIAHGVVTVRR CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AIYFHPMAIAGAGLFAATVAGLVSLFARVPFMTGLWIYPSVLGVEVPLSTVMLFDTGVYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHH VVVGAISSIALSLEEGGGA HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377; 10198001; 11356194 [H]