| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is cycG [H]
Identifier: 150395815
GI number: 150395815
Start: 639016
End: 639960
Strand: Direct
Name: cycG [H]
Synonym: Smed_0591
Alternate gene names: 150395815
Gene position: 639016-639960 (Clockwise)
Preceding gene: 150395814
Following gene: 150395818
Centisome position: 16.9
GC content: 63.6
Gene sequence:
>945_bases ATGGGCCGACGTGCAAGGTATCTGCTTTCTGGTCTGGCTCTGCTGGCGATAGCGGGAGGCGGGCTTGCCTGGTGGTTGAC CAAGCCGGATCGATCGGATGCGTCGCAGTGGGAAGGTCTCGGGGACCCCGATCTTTCCAATGGCGAACGGGTCTTCTGGG CCGGTGGTTGTGCCAGCTGCCATGCTGCGCCGGACACCACGGACAATGGCGCTTCGGACGATAGCGCGGCAGACGAAAAA AGGCTCCTGCTAGCCGGAGGCCGCAGCCTGAAGAGCCCCTTCGGCACGTTTTATCCGCCCAATATCTCGCCCGATGAAAC GGCCGGCATCGGCACCTGGACGCTCGCGGAGTTCGGCGACGCCATGACGCGCGGCGTCGGAAGGGATGGCGGGCATCTCT ATCCGTCCTTTCCCTACGGCTCCTACATCCGCATGACGGCGAAGGACGTCAATGATCTTTGGGGCTTCATGCAGACGCTG CCGAAGAGCGGCAATACGACGCCGCAGCACGATCTGGCGTTCCCCTACAATATTCGCCCGGCGATCGGCGTGTGGAAGTT CTTCTATCTTACCGACGAGCCGCGTGCCCGGATAAATACCGCCGACACCAAGCTCGCCCGCGGCCAGTACCTCGTGGAGG GGCCCGGCCATTGCGGCGAATGCCACACGCCACGCGATGCGCTTGGCGGCTTCGAGGAGGCGAGATGGCTCACCGGGGCG CCCAATCCCGAAGGTGAGGGACGGATCCCCGACATCACGCCGGCTTCGAAAAGCGTCGGCGGCTGGAGTGCGTCCGACAT CGCCTCCTATCTCGAAACGGGTTTCACCCCCGATTTCGATACCGTTGGCGGCTCGATGGTCGAGGTGCAGAAGAATATGG CGAAGCTGCCGGCGTCCGACAGAGACGCTATCGCGGCATACCTCAAGGCGCTGCCGGCGCTCTAA
Upstream 100 bases:
>100_bases TGGAACCGCGCCGCCCAGCCGGCGCGGACCTCTTTGCAACGCAGGTCGAAAGGCCCTCCGGCCGCTGCCATTGGCATTCG TGAAATTTCAAGAGGAGCCT
Downstream 100 bases:
>100_bases ACCGCAACGATCGCCTCGCTCACCCGAGTTTTTGCAGGTAACGCATGCCGGTTACCGGGCGCGGAACGAAGCGCTCGGAT TCGTAGAAGCGGTGCGCCTG
Product: gluconate 2-dehydrogenase (acceptor)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MGRRARYLLSGLALLAIAGGGLAWWLTKPDRSDASQWEGLGDPDLSNGERVFWAGGCASCHAAPDTTDNGASDDSAADEK RLLLAGGRSLKSPFGTFYPPNISPDETAGIGTWTLAEFGDAMTRGVGRDGGHLYPSFPYGSYIRMTAKDVNDLWGFMQTL PKSGNTTPQHDLAFPYNIRPAIGVWKFFYLTDEPRARINTADTKLARGQYLVEGPGHCGECHTPRDALGGFEEARWLTGA PNPEGEGRIPDITPASKSVGGWSASDIASYLETGFTPDFDTVGGSMVEVQKNMAKLPASDRDAIAAYLKALPAL
Sequences:
>Translated_314_residues MGRRARYLLSGLALLAIAGGGLAWWLTKPDRSDASQWEGLGDPDLSNGERVFWAGGCASCHAAPDTTDNGASDDSAADEK RLLLAGGRSLKSPFGTFYPPNISPDETAGIGTWTLAEFGDAMTRGVGRDGGHLYPSFPYGSYIRMTAKDVNDLWGFMQTL PKSGNTTPQHDLAFPYNIRPAIGVWKFFYLTDEPRARINTADTKLARGQYLVEGPGHCGECHTPRDALGGFEEARWLTGA PNPEGEGRIPDITPASKSVGGWSASDIASYLETGFTPDFDTVGGSMVEVQKNMAKLPASDRDAIAAYLKALPAL >Mature_313_residues GRRARYLLSGLALLAIAGGGLAWWLTKPDRSDASQWEGLGDPDLSNGERVFWAGGCASCHAAPDTTDNGASDDSAADEKR LLLAGGRSLKSPFGTFYPPNISPDETAGIGTWTLAEFGDAMTRGVGRDGGHLYPSFPYGSYIRMTAKDVNDLWGFMQTLP KSGNTTPQHDLAFPYNIRPAIGVWKFFYLTDEPRARINTADTKLARGQYLVEGPGHCGECHTPRDALGGFEEARWLTGAP NPEGEGRIPDITPASKSVGGWSASDIASYLETGFTPDFDTVGGSMVEVQKNMAKLPASDRDAIAAYLKALPAL
Specific function: Particularly expressed when cells generate energy via aerobic respiration [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 [H]
Pfam domain/function: PF00034 Cytochrom_C [H]
EC number: NA
Molecular weight: Translated: 33624; Mature: 33493
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRRARYLLSGLALLAIAGGGLAWWLTKPDRSDASQWEGLGDPDLSNGERVFWAGGCASC CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCC HAAPDTTDNGASDDSAADEKRLLLAGGRSLKSPFGTFYPPNISPDETAGIGTWTLAEFGD CCCCCCCCCCCCCCCCCCCCEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHH AMTRGVGRDGGHLYPSFPYGSYIRMTAKDVNDLWGFMQTLPKSGNTTPQHDLAFPYNIRP HHHHCCCCCCCEECCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC AIGVWKFFYLTDEPRARINTADTKLARGQYLVEGPGHCGECHTPRDALGGFEEARWLTGA HHCEEEEEEECCCCCCEECCCHHHHHCCCEEEECCCCCCCCCCCHHHHCCHHHHCCCCCC PNPEGEGRIPDITPASKSVGGWSASDIASYLETGFTPDFDTVGGSMVEVQKNMAKLPASD CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHCCCCC RDAIAAYLKALPAL HHHHHHHHHHHCCC >Mature Secondary Structure GRRARYLLSGLALLAIAGGGLAWWLTKPDRSDASQWEGLGDPDLSNGERVFWAGGCASC CCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCC HAAPDTTDNGASDDSAADEKRLLLAGGRSLKSPFGTFYPPNISPDETAGIGTWTLAEFGD CCCCCCCCCCCCCCCCCCCCEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHH AMTRGVGRDGGHLYPSFPYGSYIRMTAKDVNDLWGFMQTLPKSGNTTPQHDLAFPYNIRP HHHHCCCCCCCEECCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC AIGVWKFFYLTDEPRARINTADTKLARGQYLVEGPGHCGECHTPRDALGGFEEARWLTGA HHCEEEEEEECCCCCCEECCCHHHHHCCCEEEECCCCCCCCCCCHHHHCCHHHHCCCCCC PNPEGEGRIPDITPASKSVGGWSASDIASYLETGFTPDFDTVGGSMVEVQKNMAKLPASD CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHCCCCC RDAIAAYLKALPAL HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7543472 [H]