| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is blaP [H]
Identifier: 150395818
GI number: 150395818
Start: 641373
End: 642263
Strand: Direct
Name: blaP [H]
Synonym: Smed_0594
Alternate gene names: 150395818
Gene position: 641373-642263 (Clockwise)
Preceding gene: 150395815
Following gene: 150395825
Centisome position: 16.96
GC content: 63.64
Gene sequence:
>891_bases ATGCCTTTGCACATAACCCGCCGAGAAATGCTGGCCGCCTCGGCCATGCTCTATCCGGCGCTCGCCCTGGGAACGCCGGC ACATGCGGCCACTGCGGCGGACGATGACGTTACGGAACGGCTTCGTCAGCTTGAAGAGCGTACCGGCGGACGTTTGGGCG TCGCTGTGCTCGATATGGAAACGAATATCTCGTTCGGATACCGGGAGACCGAGCGTTTCGCAATGTGTTCTACCTTCAAG GCGCTCGCGGCGGCTTGTGCGCTCGCCCGCGTGGATCGGGGGGAGGAAAAACTCGACCGGCGGATCACGTTCGGCAAGGA GGTCTTGCTGCCTCATTCGCCGGTAACCGAAAAGCACGTCGGCGGAAACGGCATGACCATCGCGGAACTTTGCGAAGCGG CGATCACCATCAGCGACAATGCCGCTGGCAACCTGCTGCTCGAAAGTTTCGGAGGTCCACAGGGGCTGACGTCGTGGCTA CGCTCGATTGGCGACAATACCACGCGCCTCGACCGAACGGAGCCCGACCTGAACGAAGCCCGCAAGGGCGATCCGCGCGA CACCACCACACCGGCCGCCATGCTGGACACGCTTGGAAAACTGGCTCTCGGCTCGGTCCTGTCCGAAAACGGGCGCGGAC AGCTCGTCGACTGGTTGGTTGCCAACGAAACCGGTGACGCGCGCCTTCGCGCGGGGCTGCCCAAGGATTGGCGCATCGGC GACAAGACAGGGACCAGCTCCACCGGCGCAGTCTCCGACATAGCGCTCGCCTGGCCGCCCGGCCGCGGCCCACTCCTGGT TGCCGTCTATACCGGTGAAGCGAAAGCGCCGGTCAGCGACCTGAATCCGGTCTTTGCGGAAATAGGCAAGATCGCCGCCG AGATCGTTTGA
Upstream 100 bases:
>100_bases CGCCGTCTAGCGATTCGACCGTCGGAGTCGACAGGAATAACATTCAATATCAATAATTTAGCTATGTCTTGGCGCTTGAG CCGCACAGACGGAGGAACAC
Downstream 100 bases:
>100_bases CCATGCTCTCGCGAACGGAGCGCGCTCTGGCGAGCGCGCCCGTCGATTCGAACCTGTGCGTCAGGGCAGCGTATAGGCGA TGACGTAATCGCCCGGCTTG
Product: beta-lactamase
Products: NA
Alternate protein names: Carbenicillinase [H]
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MPLHITRREMLAASAMLYPALALGTPAHAATAADDDVTERLRQLEERTGGRLGVAVLDMETNISFGYRETERFAMCSTFK ALAAACALARVDRGEEKLDRRITFGKEVLLPHSPVTEKHVGGNGMTIAELCEAAITISDNAAGNLLLESFGGPQGLTSWL RSIGDNTTRLDRTEPDLNEARKGDPRDTTTPAAMLDTLGKLALGSVLSENGRGQLVDWLVANETGDARLRAGLPKDWRIG DKTGTSSTGAVSDIALAWPPGRGPLLVAVYTGEAKAPVSDLNPVFAEIGKIAAEIV
Sequences:
>Translated_296_residues MPLHITRREMLAASAMLYPALALGTPAHAATAADDDVTERLRQLEERTGGRLGVAVLDMETNISFGYRETERFAMCSTFK ALAAACALARVDRGEEKLDRRITFGKEVLLPHSPVTEKHVGGNGMTIAELCEAAITISDNAAGNLLLESFGGPQGLTSWL RSIGDNTTRLDRTEPDLNEARKGDPRDTTTPAAMLDTLGKLALGSVLSENGRGQLVDWLVANETGDARLRAGLPKDWRIG DKTGTSSTGAVSDIALAWPPGRGPLLVAVYTGEAKAPVSDLNPVFAEIGKIAAEIV >Mature_295_residues PLHITRREMLAASAMLYPALALGTPAHAATAADDDVTERLRQLEERTGGRLGVAVLDMETNISFGYRETERFAMCSTFKA LAAACALARVDRGEEKLDRRITFGKEVLLPHSPVTEKHVGGNGMTIAELCEAAITISDNAAGNLLLESFGGPQGLTSWLR SIGDNTTRLDRTEPDLNEARKGDPRDTTTPAAMLDTLGKLALGSVLSENGRGQLVDWLVANETGDARLRAGLPKDWRIGD KTGTSSTGAVSDIALAWPPGRGPLLVAVYTGEAKAPVSDLNPVFAEIGKIAAEIV
Specific function: Hydrolyzes carbenicillin [H]
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-A beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 - InterPro: IPR000871 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 31474; Mature: 31343
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1 ; PS00146 BETA_LACTAMASE_A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLHITRREMLAASAMLYPALALGTPAHAATAADDDVTERLRQLEERTGGRLGVAVLDME CCCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEE TNISFGYRETERFAMCSTFKALAAACALARVDRGEEKLDRRITFGKEVLLPHSPVTEKHV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCCCHHCC GGNGMTIAELCEAAITISDNAAGNLLLESFGGPQGLTSWLRSIGDNTTRLDRTEPDLNEA CCCCCCHHHHHHHHEEECCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHH RKGDPRDTTTPAAMLDTLGKLALGSVLSENGRGQLVDWLVANETGDARLRAGLPKDWRIG CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEECCCCCCCCCC DKTGTSSTGAVSDIALAWPPGRGPLLVAVYTGEAKAPVSDLNPVFAEIGKIAAEIV CCCCCCCCCCHHHEEEECCCCCCCEEEEEEECCCCCCHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure PLHITRREMLAASAMLYPALALGTPAHAATAADDDVTERLRQLEERTGGRLGVAVLDME CCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEE TNISFGYRETERFAMCSTFKALAAACALARVDRGEEKLDRRITFGKEVLLPHSPVTEKHV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCCCHHCC GGNGMTIAELCEAAITISDNAAGNLLLESFGGPQGLTSWLRSIGDNTTRLDRTEPDLNEA CCCCCCHHHHHHHHEEECCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHH RKGDPRDTTTPAAMLDTLGKLALGSVLSENGRGQLVDWLVANETGDARLRAGLPKDWRIG CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEECCCCCCCCCC DKTGTSSTGAVSDIALAWPPGRGPLLVAVYTGEAKAPVSDLNPVFAEIGKIAAEIV CCCCCCCCCCHHHEEEECCCCCCCEEEEEEECCCCCCHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1840585 [H]